Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 262192872
Identifier: 262192872
GI number: 262192872
Start: 2048428
End: 2049561
Strand: Reverse
Name: 262192872
Synonym: BMA10247_A2117
Alternate gene names: NA
Gene position: 2049561-2048428 (Counterclockwise)
Preceding gene: 126446109
Following gene: 126447893
Centisome position: 87.12
GC content: 69.22
Gene sequence:
>1134_bases ATGCGCCCGAGTGTTTCCGGTGAGTTTGTGGCCGCTGCCGCGTTTACCATGGCTACACCGCCGCGCCAAGCCAAGCCAAG CCGTCGCCGCCAGTGTCGTCGCTGCTACCGCTACCGCCACGGCATCGACATCGACATCGACATCGACATCGACATCGACA TCGACATCGACATCGACATCGACATCGACTCTGGCAACAGCAACAGCAACGGCAATAGTTCCCGCCACCGCTATCATCCC CACCTTCGCCGCACACCATATGAACGTTCATCGAATTACCCATTCGAAGTACCGCAAGGAGGAAGCATGTCGACGAACAT GAAACGACTGATGACCGCGGCGCTCGGCGCCGCATTGGCGTTCGGCGCGCTGTCCGCGCGCGCCGCGAGCTTCGACTGCG CGCACGCCGCGAACGCCGCCGAGCGCGCGATCTGCGGGACGCCCGCGCTCGGCGAGTTGGACGTTCGAATGGCCGCGTAC TACGAAATGCTGCAGAACGCGCGGCCGGCCGACGAGGGCATGGCGTATCGCGAGTTCCGCGACGCGCTGCGCGACGAGCA GCAGCGCTGGCGGCAGCGCACGCGCGATGCGTGCGGTGCGCGGATCGATTGCCTGACGAACGCCTATACCGCGCGGATCG CCGCGCTGCGCGGCGTCGCCGCCGAGCGGCTCGTGCTGCGGATGACGGGTGGGAGCGCGGCGTCGGCAGGCGCCGCCGAC GCGACGTACGCGATCGAAGGCGAGTCGATCACGCTCGCGAACGGCGAATCGGTGCGCCCGGCCGCCCCGGGCTCGGCGAT GAAGCGCGTGACGACGCTCGTCGCGCGGAGCGCTGTGGCGACGATCGCCGGCCGTCCGGTCGAGGCCGTCCTGCTGAGCG ACGATCCGGGCGGCAGCGGCCGGTTCCTGTATGTGGCGACCGCGCAGCCGGGCGGCGGCGCGCCGGCGGTGCTGCTCGGC GATCGGGTAAAGCCCGTGTCGGTGTCGATCGAGCGCGCGGCGACGGGCGGCGCGGTTGTCGTCGTCGAATATCTGGATCG TCCGGAAGGCGCGCCGTTCGCGCAGGCGCCGACGATCAAGATCGTCCGGCGCTTCGCGCTGGAGCAAGGCCGGCTCGTCG AGCAGCGCGGGTAG
Upstream 100 bases:
>100_bases GACAGTTGGGGCTTGCGTGACGCCGCGGCGTATGGCCGTGCCACGGTGGTGGACGCGGTCATCGTGCGGGCCGCTTCGGC CTGGTTGACGCTTGCGGTCG
Downstream 100 bases:
>100_bases CGGGCAGGGCGCTCGCGCGCCGGCTCGGTGCGCCGTGCACGCGAGACGAGCGTGATCGGCACGATCGGAGCAAGCGGTGC GACGGGTGCGATGGGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDIDIDSGNSNSNGNSSRHRYHP HLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALAFGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAY YEMLQNARPADEGMAYREFRDALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSGRFLYVATAQPGGGAPAVLLG DRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIKIVRRFALEQGRLVEQRG
Sequences:
>Translated_377_residues MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDIDIDSGNSNSNGNSSRHRYHP HLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALAFGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAY YEMLQNARPADEGMAYREFRDALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSGRFLYVATAQPGGGAPAVLLG DRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIKIVRRFALEQGRLVEQRG >Mature_377_residues MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDIDIDSGNSNSNGNSSRHRYHP HLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALAFGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAY YEMLQNARPADEGMAYREFRDALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSGRFLYVATAQPGGGAPAVLLG DRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIKIVRRFALEQGRLVEQRG
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40413; Mature: 40413
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDI CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEE DIDSGNSNSNGNSSRHRYHPHLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALA EECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH FGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAYYEMLQNARPADEGMAYREFR HHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHH DALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCC ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSG CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC RFLYVATAQPGGGAPAVLLGDRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIK EEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHH IVRRFALEQGRLVEQRG HHHHHHHHCCCHHCCCC >Mature Secondary Structure MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDI CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEE DIDSGNSNSNGNSSRHRYHPHLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALA EECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH FGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAYYEMLQNARPADEGMAYREFR HHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHH DALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCC ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSG CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC RFLYVATAQPGGGAPAVLLGDRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIK EEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHH IVRRFALEQGRLVEQRG HHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA