Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 262192872

Identifier: 262192872

GI number: 262192872

Start: 2048428

End: 2049561

Strand: Reverse

Name: 262192872

Synonym: BMA10247_A2117

Alternate gene names: NA

Gene position: 2049561-2048428 (Counterclockwise)

Preceding gene: 126446109

Following gene: 126447893

Centisome position: 87.12

GC content: 69.22

Gene sequence:

>1134_bases
ATGCGCCCGAGTGTTTCCGGTGAGTTTGTGGCCGCTGCCGCGTTTACCATGGCTACACCGCCGCGCCAAGCCAAGCCAAG
CCGTCGCCGCCAGTGTCGTCGCTGCTACCGCTACCGCCACGGCATCGACATCGACATCGACATCGACATCGACATCGACA
TCGACATCGACATCGACATCGACATCGACTCTGGCAACAGCAACAGCAACGGCAATAGTTCCCGCCACCGCTATCATCCC
CACCTTCGCCGCACACCATATGAACGTTCATCGAATTACCCATTCGAAGTACCGCAAGGAGGAAGCATGTCGACGAACAT
GAAACGACTGATGACCGCGGCGCTCGGCGCCGCATTGGCGTTCGGCGCGCTGTCCGCGCGCGCCGCGAGCTTCGACTGCG
CGCACGCCGCGAACGCCGCCGAGCGCGCGATCTGCGGGACGCCCGCGCTCGGCGAGTTGGACGTTCGAATGGCCGCGTAC
TACGAAATGCTGCAGAACGCGCGGCCGGCCGACGAGGGCATGGCGTATCGCGAGTTCCGCGACGCGCTGCGCGACGAGCA
GCAGCGCTGGCGGCAGCGCACGCGCGATGCGTGCGGTGCGCGGATCGATTGCCTGACGAACGCCTATACCGCGCGGATCG
CCGCGCTGCGCGGCGTCGCCGCCGAGCGGCTCGTGCTGCGGATGACGGGTGGGAGCGCGGCGTCGGCAGGCGCCGCCGAC
GCGACGTACGCGATCGAAGGCGAGTCGATCACGCTCGCGAACGGCGAATCGGTGCGCCCGGCCGCCCCGGGCTCGGCGAT
GAAGCGCGTGACGACGCTCGTCGCGCGGAGCGCTGTGGCGACGATCGCCGGCCGTCCGGTCGAGGCCGTCCTGCTGAGCG
ACGATCCGGGCGGCAGCGGCCGGTTCCTGTATGTGGCGACCGCGCAGCCGGGCGGCGGCGCGCCGGCGGTGCTGCTCGGC
GATCGGGTAAAGCCCGTGTCGGTGTCGATCGAGCGCGCGGCGACGGGCGGCGCGGTTGTCGTCGTCGAATATCTGGATCG
TCCGGAAGGCGCGCCGTTCGCGCAGGCGCCGACGATCAAGATCGTCCGGCGCTTCGCGCTGGAGCAAGGCCGGCTCGTCG
AGCAGCGCGGGTAG

Upstream 100 bases:

>100_bases
GACAGTTGGGGCTTGCGTGACGCCGCGGCGTATGGCCGTGCCACGGTGGTGGACGCGGTCATCGTGCGGGCCGCTTCGGC
CTGGTTGACGCTTGCGGTCG

Downstream 100 bases:

>100_bases
CGGGCAGGGCGCTCGCGCGCCGGCTCGGTGCGCCGTGCACGCGAGACGAGCGTGATCGGCACGATCGGAGCAAGCGGTGC
GACGGGTGCGATGGGCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDIDIDSGNSNSNGNSSRHRYHP
HLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALAFGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAY
YEMLQNARPADEGMAYREFRDALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD
ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSGRFLYVATAQPGGGAPAVLLG
DRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIKIVRRFALEQGRLVEQRG

Sequences:

>Translated_377_residues
MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDIDIDSGNSNSNGNSSRHRYHP
HLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALAFGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAY
YEMLQNARPADEGMAYREFRDALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD
ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSGRFLYVATAQPGGGAPAVLLG
DRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIKIVRRFALEQGRLVEQRG
>Mature_377_residues
MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDIDIDSGNSNSNGNSSRHRYHP
HLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALAFGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAY
YEMLQNARPADEGMAYREFRDALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD
ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSGRFLYVATAQPGGGAPAVLLG
DRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIKIVRRFALEQGRLVEQRG

Specific function: Unknown

COG id: COG4461

COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40413; Mature: 40413

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDI
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEE
DIDSGNSNSNGNSSRHRYHPHLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALA
EECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH
FGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAYYEMLQNARPADEGMAYREFR
HHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHH
DALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCC
ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSG
CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
RFLYVATAQPGGGAPAVLLGDRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIK
EEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHH
IVRRFALEQGRLVEQRG
HHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MRPSVSGEFVAAAAFTMATPPRQAKPSRRRQCRRCYRYRHGIDIDIDIDIDIDIDIDIDI
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEE
DIDSGNSNSNGNSSRHRYHPHLRRTPYERSSNYPFEVPQGGSMSTNMKRLMTAALGAALA
EECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHH
FGALSARAASFDCAHAANAAERAICGTPALGELDVRMAAYYEMLQNARPADEGMAYREFR
HHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHCHHHHHHH
DALRDEQQRWRQRTRDACGARIDCLTNAYTARIAALRGVAAERLVLRMTGGSAASAGAAD
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCC
ATYAIEGESITLANGESVRPAAPGSAMKRVTTLVARSAVATIAGRPVEAVLLSDDPGGSG
CEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
RFLYVATAQPGGGAPAVLLGDRVKPVSVSIERAATGGAVVVVEYLDRPEGAPFAQAPTIK
EEEEEEECCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHH
IVRRFALEQGRLVEQRG
HHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA