Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447893
Identifier: 126447893
GI number: 126447893
Start: 2046233
End: 2047654
Strand: Reverse
Name: 126447893
Synonym: BMA10247_A2115
Alternate gene names: NA
Gene position: 2047654-2046233 (Counterclockwise)
Preceding gene: 262192872
Following gene: 126447360
Centisome position: 87.03
GC content: 74.05
Gene sequence:
>1422_bases ATGACAACCAACCAACGAGAATCCACTGTTTCTCTGCGGCGCGCTTGCGCGTCGCTAGCCGCGCTGGCGCTGCTTGCGGC CTGCACGTCGACGCCCGAGGCGATCCAGCGCAAGACGGGCTGGATGCGCAGCGAAGTCGCCGATTCCTATATCTACGCCT ACCCGCTCGTGCTGATGGACGTCGCGAAGGAAGCCGCGACGGCCGACGGCGCGCCCGTCAACACGCTGCGCCACGCGCAG GCGCTGCCCGCGCCGGGCGCCGCGAACCCGCCGCTCGCGAGCGTCGACATGCTCGATTCGACCGCGTGGCTCGACGTTGC CGACGAGCCGGTGATCGTCGCGCTGCCCGACGGGCGCGGCCGCTATCTCGACGCGCGCGCGCTCGACATGTGGACCAACG TGCTGTGGTCGACCGGCCCGTCGGCGAATCCGCGCTCGGGCGCGAGCCGCGCGCGCACGCTCGCGTTCGTCGGCGCGGGC TGGGAGGGCACGCTGCCGGAAGGCGTGACGCGCGTCGACGTGCCCGCGCGCAACGTGTGGCTCGACCTGCGGATCCAGAC GAGCGGCGGGCGCGATCTCGCCGCCGCGAGGAAACTGCAGCGCGCGATTCGCGTCGAGCCGCTGTCCGTCTATACGGGCG ACGCCCGCGGCGCGCGTGCGGATGCGGGCGCAGCGTCGGCCGAGCCCGCATCGGGCGCCGCCGCGTCGCCTGTCGCGCAG GTCGCGGCGCTCGATCCGCCGGCGTTCTTCTCGCGCGTCGCGCGCGCGCTGCAGGACAACTCGCCGCCCGCCGCCGATGC GCACGCGCAGGAAATCCTCGCCGACATCGGCGTGACGGCGGGCGCGCCGGTGCAATGGAAGGGCGACAAGCTGATCGGCG CCGAGAACGGCGCGGCCGAGGCGCGCGAGCGGCTCACCGCGCTGCCGCCGAACGCGCTTTCCGCGAACGGCTGGAGCTGG CTCGGCGACAGCGTCGGCAACTACGGGCAGGATTACGCGTTGCGCGCGTACGCGGCGTCGACGCAATTCGGCGCGGGAAC GCGCGACGACGAAACCGTCGCCGTCGTGAAGACAGACAGCGCGGGCCGGCCGCTCAACGGCGCGCACCGCTACGTGATCC GCTTCGCGCCGAACGCGCTGCCGCCCGCGCGCGCGTTCTGGTCGCTCGCGCCGTACACGCCGGACGGCGCGGTGCCCGAG CTCGGCCGCGCACGCCGCTCGATCGGCGAGCGCGACCGGCTGCGCCGCAACCGCGACGGCTCGCTCGAGATCGTCGTATC CGCGGCGCCGCCCGGCAAGGGGTACGCATCGAACTGGTTGCCCGCGCCGCGCGCCGATTTCGAGCTCGCGCTGCGGCTCT ACGCGCCGAAGCGGCAGGCCGCCGACGGCACCTGGCAGCCGCCCGCCGTCGTCCGCAGGTGA
Upstream 100 bases:
>100_bases ACAGCCGGCCGGCACGCACGCTACGAGGAAAACACCGCGCCCTACGCGCCGGCCGCCGATCAACACGCGTGGCCTGGCCG CGCGTTCGCCGTGCCACCGA
Downstream 100 bases:
>100_bases ACGTTCGCGCGCGCCGCCCGGTCTCACGGCCGGGCGCTGCGCGCGCCGACGCCCGTCTCCCACGCTGCGTCGCGAAACGC GCAGCGCCTATACTGGCGAA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTTNQRESTVSLRRACASLAALALLAACTSTPEAIQRKTGWMRSEVADSYIYAYPLVLMDVAKEAATADGAPVNTLRHAQ ALPAPGAANPPLASVDMLDSTAWLDVADEPVIVALPDGRGRYLDARALDMWTNVLWSTGPSANPRSGASRARTLAFVGAG WEGTLPEGVTRVDVPARNVWLDLRIQTSGGRDLAAARKLQRAIRVEPLSVYTGDARGARADAGAASAEPASGAAASPVAQ VAALDPPAFFSRVARALQDNSPPAADAHAQEILADIGVTAGAPVQWKGDKLIGAENGAAEARERLTALPPNALSANGWSW LGDSVGNYGQDYALRAYAASTQFGAGTRDDETVAVVKTDSAGRPLNGAHRYVIRFAPNALPPARAFWSLAPYTPDGAVPE LGRARRSIGERDRLRRNRDGSLEIVVSAAPPGKGYASNWLPAPRADFELALRLYAPKRQAADGTWQPPAVVRR
Sequences:
>Translated_473_residues MTTNQRESTVSLRRACASLAALALLAACTSTPEAIQRKTGWMRSEVADSYIYAYPLVLMDVAKEAATADGAPVNTLRHAQ ALPAPGAANPPLASVDMLDSTAWLDVADEPVIVALPDGRGRYLDARALDMWTNVLWSTGPSANPRSGASRARTLAFVGAG WEGTLPEGVTRVDVPARNVWLDLRIQTSGGRDLAAARKLQRAIRVEPLSVYTGDARGARADAGAASAEPASGAAASPVAQ VAALDPPAFFSRVARALQDNSPPAADAHAQEILADIGVTAGAPVQWKGDKLIGAENGAAEARERLTALPPNALSANGWSW LGDSVGNYGQDYALRAYAASTQFGAGTRDDETVAVVKTDSAGRPLNGAHRYVIRFAPNALPPARAFWSLAPYTPDGAVPE LGRARRSIGERDRLRRNRDGSLEIVVSAAPPGKGYASNWLPAPRADFELALRLYAPKRQAADGTWQPPAVVRR >Mature_472_residues TTNQRESTVSLRRACASLAALALLAACTSTPEAIQRKTGWMRSEVADSYIYAYPLVLMDVAKEAATADGAPVNTLRHAQA LPAPGAANPPLASVDMLDSTAWLDVADEPVIVALPDGRGRYLDARALDMWTNVLWSTGPSANPRSGASRARTLAFVGAGW EGTLPEGVTRVDVPARNVWLDLRIQTSGGRDLAAARKLQRAIRVEPLSVYTGDARGARADAGAASAEPASGAAASPVAQV AALDPPAFFSRVARALQDNSPPAADAHAQEILADIGVTAGAPVQWKGDKLIGAENGAAEARERLTALPPNALSANGWSWL GDSVGNYGQDYALRAYAASTQFGAGTRDDETVAVVKTDSAGRPLNGAHRYVIRFAPNALPPARAFWSLAPYTPDGAVPEL GRARRSIGERDRLRRNRDGSLEIVVSAAPPGKGYASNWLPAPRADFELALRLYAPKRQAADGTWQPPAVVRR
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49931; Mature: 49800
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNQRESTVSLRRACASLAALALLAACTSTPEAIQRKTGWMRSEVADSYIYAYPLVLMD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VAKEAATADGAPVNTLRHAQALPAPGAANPPLASVDMLDSTAWLDVADEPVIVALPDGRG HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCEEEEECCCCC RYLDARALDMWTNVLWSTGPSANPRSGASRARTLAFVGAGWEGTLPEGVTRVDVPARNVW CEECHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCEEECCCCCEEE LDLRIQTSGGRDLAAARKLQRAIRVEPLSVYTGDARGARADAGAASAEPASGAAASPVAQ EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH VAALDPPAFFSRVARALQDNSPPAADAHAQEILADIGVTAGAPVQWKGDKLIGAENGAAE HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCHHH ARERLTALPPNALSANGWSWLGDSVGNYGQDYALRAYAASTQFGAGTRDDETVAVVKTDS HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC AGRPLNGAHRYVIRFAPNALPPARAFWSLAPYTPDGAVPELGRARRSIGERDRLRRNRDG CCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCC SLEIVVSAAPPGKGYASNWLPAPRADFELALRLYAPKRQAADGTWQPPAVVRR CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCCHHHHCC >Mature Secondary Structure TTNQRESTVSLRRACASLAALALLAACTSTPEAIQRKTGWMRSEVADSYIYAYPLVLMD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH VAKEAATADGAPVNTLRHAQALPAPGAANPPLASVDMLDSTAWLDVADEPVIVALPDGRG HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEEECCCCEEEEECCCCC RYLDARALDMWTNVLWSTGPSANPRSGASRARTLAFVGAGWEGTLPEGVTRVDVPARNVW CEECHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEECCCCCCCCCCCEEECCCCCEEE LDLRIQTSGGRDLAAARKLQRAIRVEPLSVYTGDARGARADAGAASAEPASGAAASPVAQ EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH VAALDPPAFFSRVARALQDNSPPAADAHAQEILADIGVTAGAPVQWKGDKLIGAENGAAE HHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCHHH ARERLTALPPNALSANGWSWLGDSVGNYGQDYALRAYAASTQFGAGTRDDETVAVVKTDS HHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECC AGRPLNGAHRYVIRFAPNALPPARAFWSLAPYTPDGAVPELGRARRSIGERDRLRRNRDG CCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCC SLEIVVSAAPPGKGYASNWLPAPRADFELALRLYAPKRQAADGTWQPPAVVRR CEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA