Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126447937
Identifier: 126447937
GI number: 126447937
Start: 1182958
End: 1183257
Strand: Reverse
Name: 126447937
Synonym: BMA10247_A1213
Alternate gene names: NA
Gene position: 1183257-1182958 (Counterclockwise)
Preceding gene: 126447028
Following gene: 126446594
Centisome position: 50.29
GC content: 62.67
Gene sequence:
>300_bases TTGGGGCCAGCGCAATCCCATGAGCGTCTCCTTCGTGCTCCGTTTTCGATATGGATGCGGCCTTGCGAGCCGCGCAACGG CATGCATGTCGTGCGGCTGATTGTAGGAGGCGCGTCGACGGGCTTCCAAATATTGCGAGGGGTTCCTAAAGAATGGGATC GGGCGGTGGGGAGGCGAGGGGTGGGGCGGATGTCGAGTTTGGATGCCGGATGCCGGATGCCGGATGTCCGATGTCCGATG TCCGATGTCGGGCGTCGGGGTCGAAGGTCCGACGTCGGACGTCGAAGGTCTGAGGTCTGA
Upstream 100 bases:
>100_bases GCTTGACGACGAAGCCGATCTTCACCGGGGCCGCGCCTTGCGCATGTGCGGGCGCCGCCGCCGACAAACCGGCGGCGAGG CTCGCGCAGACGAGGGCGGC
Downstream 100 bases:
>100_bases GGTCGAAGGTCGAAGGTCGAAGGTTGAAGGGCGAAGGGCGAAGGGCGAAGGGCGAAGGGCGAAGGGCGGCGGGGCGTCGC GGGAAAAGCACGATTCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MGPAQSHERLLRAPFSIWMRPCEPRNGMHVVRLIVGGASTGFQILRGVPKEWDRAVGRRGVGRMSSLDAGCRMPDVRCPM SDVGRRGRRSDVGRRRSEV
Sequences:
>Translated_99_residues MGPAQSHERLLRAPFSIWMRPCEPRNGMHVVRLIVGGASTGFQILRGVPKEWDRAVGRRGVGRMSSLDAGCRMPDVRCPM SDVGRRGRRSDVGRRRSEV >Mature_98_residues GPAQSHERLLRAPFSIWMRPCEPRNGMHVVRLIVGGASTGFQILRGVPKEWDRAVGRRGVGRMSSLDAGCRMPDVRCPMS DVGRRGRRSDVGRRRSEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11085; Mature: 10954
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPAQSHERLLRAPFSIWMRPCEPRNGMHVVRLIVGGASTGFQILRGVPKEWDRAVGRRG CCCCHHHHHHHHCCHHHHCCCCCCCCCCEEEHHHHCCCCHHHHHHHCCCHHHHHHHHHCC VGRMSSLDAGCRMPDVRCPMSDVGRRGRRSDVGRRRSEV CCCCHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure GPAQSHERLLRAPFSIWMRPCEPRNGMHVVRLIVGGASTGFQILRGVPKEWDRAVGRRG CCCHHHHHHHHCCHHHHCCCCCCCCCCEEEHHHHCCCCHHHHHHHCCCHHHHHHHHHCC VGRMSSLDAGCRMPDVRCPMSDVGRRGRRSDVGRRRSEV CCCCHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA