Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126447637
Identifier: 126447637
GI number: 126447637
Start: 2000758
End: 2002239
Strand: Reverse
Name: 126447637
Synonym: BMA10247_A2065
Alternate gene names: NA
Gene position: 2002239-2000758 (Counterclockwise)
Preceding gene: 126446413
Following gene: 126447916
Centisome position: 85.1
GC content: 63.56
Gene sequence:
>1482_bases TTGTTTTTTAATGGCGTGATGCTGAAGACGCCCATGCCCACGCAGCACGAACTCGAGATGGTGACGCTCGAGGAACTCGT GCCGAAGGACCACCTGCTGCGCCAGATCGATGCGGCGGTGGATTTCGAGTTCATCCGCGCGAAGGTGGCGCATCTGTATT GCGCGGACAACGGGCGGCCGGCGCTCGATCCCGTGGTGATGTTCAAGCTGTTGTTCATCGGCTACCTGTTCGGGGTGCGC AGCGAGCGGCAACTGATGCGTGAGGTCCAGGTCAACGTCGCCTATCGCTGGTTCGCCCGGTTCCGGCTGACCGACAAGGT GCCGGATGCGTCAACGTTCTCGCAGAATCGCCGCCGACGCTTCACGGACACGACGGTGTATCAGGAGATCTTCGACGAGA TCGTGCGGCAGGCGATCAAGCGCGGGCTGGTCGACGGTCGGGTGCTGTACACGGACAGCACGCACCTGAAGGCGAACGCG AACAAAGGCAAGTTCGATGTGGTGAAGCTGGAGCAGACGCCGGCCGCCTACACGGAGGCATTGAACGCGGCAGTGGATGC GGACCGGGCCGCGCATGGCAGGAAGCCGCTGGATCGCGACGACGATGAGCCGCCGTCTAGCAAGGACACCAAGCTCAGCC GGACCGATCCGGACAGCGGCTACATGGTGCGGGACGACAAGCCGAAGGGGTTCTTCTATCTGGACCACCGCACGGTGGAT GCCAAGCACGCGATCATCACCGATACGCATGTGACGCCGGCCTCGGTGCATGACAGCCAGCCGTATCTGGATCGGCTGGA TCGCCAGCGCGAGCGCTTTGAGTTCAAGGTCGAGGCGGTGGGGCTGGATGCGGGCTACTTCACGCCGGCGGTGTGCCAGG GGCTGGAGGAGCGAGGGATTGCCGGGGTGATGGGCTATCGCACGCCGAACCACAAGCCGGGCATGTTCTACAAACGGCAG TTCAAGTACGACGCGTATCGCAACGAATACGTGTGCCCGCAGGGGCAGGCCCTGCCGTACAGCACGACCAATCGGCTCGG CTATCGGGAATACAAATCCAATGCGCAGATCTGCGGGCGCTGCCCGGTACGATCGCAGTGCACGAACAGTGCGATCGCGG TGAAGGTGGTAACGCGCCACGTGTGGGAGCGCGCCAAGGAGCGGGTGGACGCACGGCGCTTGACCGAATGGGGCCAACGC ATTTACGCGCGGCGCAAGCAGACGGTGGAGCGCAGCTTCGCCGATGCCAAGCAGCTGCATGGGCACCGTTATGCCCGTAT GCGTGGGCTACGCAAGGTGGCCGAGCAGTGCTTGCTGGCCGCGGCGGCACAGAACATCAAGAAGATTGCGATGCTGCTGG TGCGGAAGCGGAAAAAGGGGCCAGCGGGTCCCGATTGGCGCTTCGTGCGCATGCTGCTGCGTCTGGTGAGCGGTTTGCGC TGCAGCTTCGACTACCCGCTCGCGGCGAACCCGCAATCCTGA
Upstream 100 bases:
>100_bases CTCAACCCAGAATTAAACGAAACTTAAAAGCAGCAAAAAAAACGCCCCGCACGAAGCGGGGCTTCAGATTGCTGACAAAC CCTCGCCAAGTGGGGGATTT
Downstream 100 bases:
>100_bases TCCCAGAAAGACAAAACCCCACGCTCACAAAAACGTGGGGTTCGTCAGCAGTCTGGGCCTTCATCTGGCGATGAAGGCCT TTTACTTTGCGGCTCGTGTG
Product: ISBma2, transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; Transposase Is4 Family Protein; Transposase IS4 Family; ISCps6 Transposase; ISPsy22 Transposase Truncated; ISPsy6 Transposase; IS5 Family Transposase N-Terminal Domain Protein; Transposase And Inactivated Derivative; ISMca1 Transposase; IS5 Family Transposase N-Terminal Domain; Transposase ; Transposase Fragment IS5 Family; IS4 Transposase; Transposase For IS; ISPpu20 Transposase; Transposase-Related Protein; Transposase Mutator Type; Phage-Associated Cell Wall Hydrolase; Transposase Truncated; Transposase For Insertion Sequence NGRIS-8b; ISSag8 Transposase
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVR SERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANA NKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQ FKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQR IYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLVRKRKKGPAGPDWRFVRMLLRLVSGLR CSFDYPLAANPQS
Sequences:
>Translated_493_residues MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVR SERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANA NKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQ FKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQR IYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLVRKRKKGPAGPDWRFVRMLLRLVSGLR CSFDYPLAANPQS >Mature_493_residues MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRPALDPVVMFKLLFIGYLFGVR SERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRFTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANA NKGKFDVVKLEQTPAAYTEALNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGIAGVMGYRTPNHKPGMFYKRQ FKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQR IYARRKQTVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLVRKRKKGPAGPDWRFVRMLLRLVSGLR CSFDYPLAANPQS
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56767; Mature: 56767
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRP CCCCCEEEECCCCCCHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC ALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRR CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH FTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEA CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHH LNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEEC AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGI CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCC AGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGR EEEECCCCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECC CPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLH CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLVRKRKKGPAGPDWRFVRMLLRLVSGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCE CSFDYPLAANPQS ECCCCCCCCCCCC >Mature Secondary Structure MFFNGVMLKTPMPTQHELEMVTLEELVPKDHLLRQIDAAVDFEFIRAKVAHLYCADNGRP CCCCCEEEECCCCCCHHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC ALDPVVMFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRR CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH FTDTTVYQEIFDEIVRQAIKRGLVDGRVLYTDSTHLKANANKGKFDVVKLEQTPAAYTEA CHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCEEEEEECCCCHHHHHH LNAAVDADRAAHGRKPLDRDDDEPPSSKDTKLSRTDPDSGYMVRDDKPKGFFYLDHRTVD HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECEEEC AKHAIITDTHVTPASVHDSQPYLDRLDRQRERFEFKVEAVGLDAGYFTPAVCQGLEERGI CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHCCHHHCCC AGVMGYRTPNHKPGMFYKRQFKYDAYRNEYVCPQGQALPYSTTNRLGYREYKSNAQICGR EEEECCCCCCCCCCCHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEECC CPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVERSFADAKQLH CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHRYARMRGLRKVAEQCLLAAAAQNIKKIAMLLVRKRKKGPAGPDWRFVRMLLRLVSGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCE CSFDYPLAANPQS ECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA