| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126447577
Identifier: 126447577
GI number: 126447577
Start: 2247627
End: 2249429
Strand: Direct
Name: 126447577
Synonym: BMA10247_A2318
Alternate gene names: NA
Gene position: 2247627-2249429 (Clockwise)
Preceding gene: 126446010
Following gene: 126447816
Centisome position: 95.53
GC content: 75.21
Gene sequence:
>1803_bases ATGACGACGGGCGCCGTCGCGGCGCGGCGGCTTCCTCGCCGCGGCACGGCGCGCGGCCGGCGCGCCCCGTCGCGCGCGTT CACGATCCACGGAGGTGACGAGATGCGCCGTTCGCGCCCGCCGAAGCCCGCGAAGCCCGCCGCCGTCCGGCGCCGCCCGC ACGGCGCGGCGCGCGCGCACGCCATTCGCGGCAACGGTCCGCAGCGGCGCGCCGTGCGCGAACGCGCGGCCCGCCGCCTG TCGCGCGACATCGACGCGGCGCTGCGCCGCGCGTCGACCTACCCGCATCCGGCCGGCCCTATCGTGCGCATCGAAACGCA CCTCTCCGTCGTTTATCTCGTCGGGCGCTTCGCGTACAAGCGCCTGAAGCCGTTCGATTTCGGCTTCGCGAATTTCACCG AACTCGCCGCGCGCCGCCGCGCGTGCGAAGCGGAGCTCGCGCTGAACCGCCCGCTCGCCGCGCCGATCTATCTCGCCGCC GGCCCGCTCGTGCGCCGCGCGCGCGGCTTGCGCCTGTTCGGCGCGGGCGCGGCCGTCGACCACGTCGTCCGGATGCGCCG CTTCGACGAGCGGATGCTGTTCTCCCGGCTGCTCGCGCGCGGCGCGCTCGACGCGGCGGACATCGATGCCGCCGCGACGC GCCTCGCCGCCTACCATCTGCACGCGCCGCGCGACATCCCGCGGCGCGCGTACGGCAGCGCGCGCGAGCTGCGCCGGCAG CTCGACGACATGCTCGCGCCGCTCGAGCGCGCGCTCGGCGCGGCGCTGCCGGCGTCGCTGCGCGCGTGGTGCGTGCGGCG CTGCGACGAGCTCGCCGCGCACCTGGACGCCCGGCGAGCCGACGGCTACGTCCGCGCATGCCACGGCGATCTGCACCTGA ACAACGTCGTGAAGCGCGGCCGCGACGCGCTGATGTTCGACTGCATCGATTTCGACGACGCGCTGCGCTGGATCGACGTG ATCAACGATCTGTCGTTTCTGTTGATGGATCTGCACGCGCACGATCGCGCCGCCCTCGCGCACCGCCTGCTGAACCGTTG GCTCGACGAAACGGGCGATTTCGCCGGCCTCGCCGCGCTGCCGCTGTATGTCGCGTATCGCGCGCTCGTGCGGGCGCTCG TCGCGACGATGCGCGCGGGCGGCGACGCCGCGGCGCGCGCCGCGCGCATCGAGCGCGCGCGCCGGTACGTCGACGTCGCC GCGCACGCGGCCCGCGCGCGCCGCCCATGCCTGCTGCTGTGCCACGGCTATTCGGGCTCGGGCAAATCGGTTGCGAGCCG CGCGCTCGCCGACGTGTCCGGTGCGATCCGGCTGTCGAGCGACAGCGAGCGCAAGCGCGCCCGACCGTTCGCGGCGGTCG ACGCGCGGCCGCTTCCCGCGAGCGCGTACACGCCGCAGCAGATCGACGCGCAATACGAGCGCCTGCGCGCGCTCGCGCGC GACGTGCTGCGCGCCGGCTACACGGCGCTCGTCGACGCGACGTTTCTCTCGCATGCGCGCCGCGCACGCTTCTTCGCGCT CGCGCGCGAGCTGGGCGTGCCCGTGTACGTGCTCGATTTCCATGCGAGCCGCGCATGCCTCGAGCGGCGCGTCGATGCGC GCGCCGCCGCGCGCGACGATCGTTCGGACGCGGGCGCGGCCGTGCTCGCGACGCAACGCGCGAGCGCCGATCCGCTCGAT GCCGACGAGCGCGCGCGCACGATCGGCTTCGATACCGACGTGCCGCTCGCGACGCTCCGGTCGGCCGGCTATTGGCGGCC GGTGCTCGACGCCGCGCGGGTGGACGCGCAAGCGACGCGTTGA
Upstream 100 bases:
>100_bases AGCCGAGCGACGACGACGGCGTTTAGGCAGGCCCGCGGCCCACGCGACGCGCGCGGGCGCTTGACCCACGTCAAGCCGGC GCCCCGCGCGATCGGGTCGA
Downstream 100 bases:
>100_bases AGCGGCGGGCCGCGCCGTGCGCAACCGTTGCCGCGACACATCGCGGCAACGGAGCCCGCGCCGCACGCACCGCAGGCCGT TCGCGCGCGGACGCCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MTTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRL SRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFTELAARRRACEAELALNRPLAAPIYLAA GPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQ LDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDV INDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVA AHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALAR DVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDDRSDAGAAVLATQRASADPLD ADERARTIGFDTDVPLATLRSAGYWRPVLDAARVDAQATR
Sequences:
>Translated_600_residues MTTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRL SRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFTELAARRRACEAELALNRPLAAPIYLAA GPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQ LDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDV INDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVA AHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALAR DVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDDRSDAGAAVLATQRASADPLD ADERARTIGFDTDVPLATLRSAGYWRPVLDAARVDAQATR >Mature_599_residues TTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLS RDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFTELAARRRACEAELALNRPLAAPIYLAAG PLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQL DDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVI NDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAA HAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARD VLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDDRSDAGAAVLATQRASADPLDA DERARTIGFDTDVPLATLRSAGYWRPVLDAARVDAQATR
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 66188; Mature: 66056
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAH CCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCHHHHCCCCCHHHHH AIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH RLKPFDFGFANFTELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVD HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCEEEECCHHHH HVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHH LDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRG HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCC RDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAAL CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH PLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC GKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALAR CHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDD HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCC RSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDAARVDAQATR CCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure TTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAH CCHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCHHHHCCCCCHHHHH AIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYK EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH RLKPFDFGFANFTELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVD HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCEEEECCHHHH HVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHH LDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRG HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCC RDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAAL CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH PLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC GKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALAR CHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH DVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDD HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHCCC RSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDAARVDAQATR CCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]