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The map label for this gene is hcr [C]

Identifier: 126447400

GI number: 126447400

Start: 1895674

End: 1896816

Strand: Reverse

Name: hcr [C]

Synonym: BMA10247_A1971

Alternate gene names: 126447400

Gene position: 1896816-1895674 (Counterclockwise)

Preceding gene: 126445844

Following gene: 126446876

Centisome position: 80.62

GC content: 67.45

Gene sequence:

>1143_bases
ATGCGAGATGCCGCGAATTTCGAACCGGCCGACAGCCGCGTGACGCGTCCCGCGTTCTGGCAGGCGCTGCCGGAGCGCTG
GACGAGCGATGTCGAGGAGACGCTCGTGTGCTGCCACGTGCGGCAGGAAACGCATGACGTGAAGAGCTTTTTCTTCCGCT
CGCCGCAGGGGCGCGCGTTCTCGTTCGAGCCCGGGCAGTTCGTCACGCTCGAGCTCGACATCGATGGCGAGACGATCAAC
CGCTGCTACACGATCTCGTCCTCGCCCGCGCGGCCGCACACGATCTCGATCACGGTCAAGCGCGTGCCGGGCGGCAAGGT
GTCGAACTGGCTGCACGACAACCTGCAGCCGGGCGCGCCGCTGCGCGTGCTCGGCCCGGCGGGCGAATTCACGTGCGCGC
GGCATCCGGCGCGCAAGTACCTGTTCCTGTCCGCCGGTTCGGGCATCACGCCGCTGATGTCGATGAGCCGCGCGCATCAC
GATCTCGCCGAGGATCGCGACATCGTGTTCGTTCATAGCGCGCGCACGCCGGACAACATCATCTTCGCGCGCGAGCTCGA
TCTGATCGCGTCGACGCATGCGAACTTCCGCACCGCGTTCGTCTGCGAGCGGCTCGGCGCGCGCACGAACTGGCACGGCG
TGACGGGCTTCCTGTCGCTGCCGCTGCTGAAGCTGGTCGCGCCGGATTTCATGGAGCGCGAGATCTTCACGTGCGGGCCC
GCGCCGTACATGAAGGCGGTGCGCGAGCTGCTCGCCGAAGCCGGATTCGATCGCAGCCGCTATCACGAAGAGAGCTTTTC
GTTCGAGACGCTCGCGCAGGGCGAGGCCCCGGCCGATGCGCCGGCGGGCGAAGACGCGGCGGCGCGCGGCGCGCAAGTGC
GCCAGTACACGATCGCGTTCGCGAAGAGCCATCGCGAGATCGCATGCGGCGCGGATCAGCACGTGTTCGATGCCGCGCGC
CGCGCGGGCGTGCGCCTGCCGGCGTCGTGCACGCAGGGCATGTGCGGCACCTGCAAGGTAAAGCTCGTGTCCGGCCAGGT
CGACATGAAGCACAACGGCGGCATTCGTCAGCGCGAAATCGATCAGGGGATGGTGCTGCTTTGCTGCAGCAAGCCGCTGT
CCGATCTCGTCGTCGACAAATGA

Upstream 100 bases:

>100_bases
CGCCGTACACCGAAGGGCTCGTCGAGAAGTTCTGCGAGTGGTACGTCGGCCGGCTGGCCGCGCATATCGGCGCATAGCAC
GAAGACGGAGCGCAACAATG

Downstream 100 bases:

>100_bases
GCGCGTCGCCGCTGCGCAAGAACGTGTCGTAAAAGAACGATAACGGGGAATTGTGGTTGAAGAACCTAGAGAGGCCCCTC
GCTTTTCGACAACCTCAAGG

Product: putative ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRDAANFEPADSRVTRPAFWQALPERWTSDVEETLVCCHVRQETHDVKSFFFRSPQGRAFSFEPGQFVTLELDIDGETIN
RCYTISSSPARPHTISITVKRVPGGKVSNWLHDNLQPGAPLRVLGPAGEFTCARHPARKYLFLSAGSGITPLMSMSRAHH
DLAEDRDIVFVHSARTPDNIIFARELDLIASTHANFRTAFVCERLGARTNWHGVTGFLSLPLLKLVAPDFMEREIFTCGP
APYMKAVRELLAEAGFDRSRYHEESFSFETLAQGEAPADAPAGEDAAARGAQVRQYTIAFAKSHREIACGADQHVFDAAR
RAGVRLPASCTQGMCGTCKVKLVSGQVDMKHNGGIRQREIDQGMVLLCCSKPLSDLVVDK

Sequences:

>Translated_380_residues
MRDAANFEPADSRVTRPAFWQALPERWTSDVEETLVCCHVRQETHDVKSFFFRSPQGRAFSFEPGQFVTLELDIDGETIN
RCYTISSSPARPHTISITVKRVPGGKVSNWLHDNLQPGAPLRVLGPAGEFTCARHPARKYLFLSAGSGITPLMSMSRAHH
DLAEDRDIVFVHSARTPDNIIFARELDLIASTHANFRTAFVCERLGARTNWHGVTGFLSLPLLKLVAPDFMEREIFTCGP
APYMKAVRELLAEAGFDRSRYHEESFSFETLAQGEAPADAPAGEDAAARGAQVRQYTIAFAKSHREIACGADQHVFDAAR
RAGVRLPASCTQGMCGTCKVKLVSGQVDMKHNGGIRQREIDQGMVLLCCSKPLSDLVVDK
>Mature_380_residues
MRDAANFEPADSRVTRPAFWQALPERWTSDVEETLVCCHVRQETHDVKSFFFRSPQGRAFSFEPGQFVTLELDIDGETIN
RCYTISSSPARPHTISITVKRVPGGKVSNWLHDNLQPGAPLRVLGPAGEFTCARHPARKYLFLSAGSGITPLMSMSRAHH
DLAEDRDIVFVHSARTPDNIIFARELDLIASTHANFRTAFVCERLGARTNWHGVTGFLSLPLLKLVAPDFMEREIFTCGP
APYMKAVRELLAEAGFDRSRYHEESFSFETLAQGEAPADAPAGEDAAARGAQVRQYTIAFAKSHREIACGADQHVFDAAR
RAGVRLPASCTQGMCGTCKVKLVSGQVDMKHNGGIRQREIDQGMVLLCCSKPLSDLVVDK

Specific function: This is an electron transfer partner for desA3 [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Homo sapiens, GI84875541, Length=247, Percent_Identity=27.9352226720648, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1787098, Length=343, Percent_Identity=32.0699708454811, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787658, Length=359, Percent_Identity=30.6406685236769, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1788104, Length=332, Percent_Identity=23.4939759036145, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1788903, Length=230, Percent_Identity=26.0869565217391, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322146, Length=236, Percent_Identity=24.5762711864407, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323552, Length=210, Percent_Identity=25.7142857142857, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322699, Length=226, Percent_Identity=25.2212389380531, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323510, Length=253, Percent_Identity=23.3201581027668, Blast_Score=68, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42003; Mature: 42003

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAANFEPADSRVTRPAFWQALPERWTSDVEETLVCCHVRQETHDVKSFFFRSPQGRAF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
SFEPGQFVTLELDIDGETINRCYTISSSPARPHTISITVKRVPGGKVSNWLHDNLQPGAP
EECCCCEEEEEEEECCCEECEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCC
LRVLGPAGEFTCARHPARKYLFLSAGSGITPLMSMSRAHHDLAEDRDIVFVHSARTPDNI
EEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCE
IFARELDLIASTHANFRTAFVCERLGARTNWHGVTGFLSLPLLKLVAPDFMEREIFTCGP
EEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCEECCC
APYMKAVRELLAEAGFDRSRYHEESFSFETLAQGEAPADAPAGEDAAARGAQVRQYTIAF
CHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHEEH
AKSHREIACGADQHVFDAARRAGVRLPASCTQGMCGTCKVKLVSGQVDMKHNGGIRQREI
HHCCCEEECCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECEEEECCCCCCCHHEC
DQGMVLLCCSKPLSDLVVDK
CCCEEEEEECCCHHHHHCCC
>Mature Secondary Structure
MRDAANFEPADSRVTRPAFWQALPERWTSDVEETLVCCHVRQETHDVKSFFFRSPQGRAF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
SFEPGQFVTLELDIDGETINRCYTISSSPARPHTISITVKRVPGGKVSNWLHDNLQPGAP
EECCCCEEEEEEEECCCEECEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCC
LRVLGPAGEFTCARHPARKYLFLSAGSGITPLMSMSRAHHDLAEDRDIVFVHSARTPDNI
EEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCE
IFARELDLIASTHANFRTAFVCERLGARTNWHGVTGFLSLPLLKLVAPDFMEREIFTCGP
EEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCEECCC
APYMKAVRELLAEAGFDRSRYHEESFSFETLAQGEAPADAPAGEDAAARGAQVRQYTIAF
CHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHEEH
AKSHREIACGADQHVFDAARRAGVRLPASCTQGMCGTCKVKLVSGQVDMKHNGGIRQREI
HHCCCEEECCCCHHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEECEEEECCCCCCCHHEC
DQGMVLLCCSKPLSDLVVDK
CCCEEEEEECCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]