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The map label for this gene is yeaW [H]

Identifier: 126445844

GI number: 126445844

Start: 1896840

End: 1898108

Strand: Reverse

Name: yeaW [H]

Synonym: BMA10247_A1972

Alternate gene names: 126445844

Gene position: 1898108-1896840 (Counterclockwise)

Preceding gene: 126446398

Following gene: 126447400

Centisome position: 80.68

GC content: 63.75

Gene sequence:

>1269_bases
ATGGATGCAAGGAATCCGGAGCAAACGATGAAAGTATCGGCAGACGTCCGCGCGCTGGTGGCGCGCCGCAAGGCAGGCTA
CAGCCTCGAAGCCCCGTTCTATCTGAGCGACGAGATCTTTGCGCTCGACATGGACGCGATCTTTCGGCGGCACTGGATCC
AGATGGGCGTCGAGCCGGACGTGCCCGAGCCCGGCGATTACGTGACGGTGCAGCTCGGGGGCGATTCGATCCTGATCGTG
CGCGACGACGACATGCAGGTTCGCGCGTTCCACAACGTCTGCCGCCATCGCGGCGCGCGCCTGTGCAACGAGGAAAAAGG
GTCGGTCGGCAACATCGTGTGCCCGTATCACAGCTGGACCTACAACCTCACGGGCCAGTTGATGTTCGCCGAGCACATGG
GCGAGAAGTTCGACCGCTGCAAGCACAGCCTGAAGCCCGTGCATCTGGAGAATCTCGCGGGGCTGCTGTTCGTGTGCCTT
GCCGACGAGCCGCCCGTCGATTTCGCGACGATGCGCGCGGCGATGGAGCCGTATCTGCTGCCGCACGATCTGCCGAACAC
GAAGATCGCCGCGCAGATCGACATCGTCGAGAAAGGCAACTGGAAGCTGACGATGGAGAACAATCGCGAGTGCTATCACT
GCGTCGCGAACCATCCGGAGTTGACCATTTCGTTGTACGAATACGGCTTCGGCTATCAGCCGTCGCCCGCGAACGCCGAA
GGCATGGCCGCGTTCGAGCGCACCTGCGTCGAGCGCGCCGCGCAGTGGGAGGCGCTGAACCTGCCGTCCGTCGAAGTGGA
GCGCCTCACCGACGTGACGGGCTTTCGCACGCAGCGTCTGCCGCTCGACCGCAGCGGCGAATCGCAAACGCTCGATGCGA
AGGTCGCGTCGAAGAAACTGCTCGGCGAATTCCGCCAGGCGGATCTCGGCGGCCTGTCGTTCTGGACGCAGCCGAATTCG
TGGCACCACTTCATGAGCGATCACATCGTCACGTTCTCGGTGATTCCGCTGTCGGCGGGCGAGACGCTCGTGCGCACGAA
ATGGCTCGTTCACAGGGACGCGAAGGAAGGCATCGACTACGACGTGAAGAACCTCACGGCCGTCTGGAACGCGACGAACG
ATCAGGATCGCGCGCTCGTCGAATTCTCGCAGCGCGGCGCGGCGAGCAGCGCCTACGAGCCCGGCCCGTATTCGCCGTAC
ACCGAAGGGCTCGTCGAGAAGTTCTGCGAGTGGTACGTCGGCCGGCTGGCCGCGCATATCGGCGCATAG

Upstream 100 bases:

>100_bases
AATTGAAGGGAGTTCGGTCGAAAAAGCACAAGTGATCCTCGCGTATTTGCGCGAGCATCAGCTCATCGACTACTGAACGA
AGCCTGTCGGCAACAACACC

Downstream 100 bases:

>100_bases
CACGAAGACGGAGCGCAACAATGATGCGAGATGCCGCGAATTTCGAACCGGCCGACAGCCGCGTGACGCGTCCCGCGTTC
TGGCAGGCGCTGCCGGAGCG

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MDARNPEQTMKVSADVRALVARRKAGYSLEAPFYLSDEIFALDMDAIFRRHWIQMGVEPDVPEPGDYVTVQLGGDSILIV
RDDDMQVRAFHNVCRHRGARLCNEEKGSVGNIVCPYHSWTYNLTGQLMFAEHMGEKFDRCKHSLKPVHLENLAGLLFVCL
ADEPPVDFATMRAAMEPYLLPHDLPNTKIAAQIDIVEKGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPANAE
GMAAFERTCVERAAQWEALNLPSVEVERLTDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADLGGLSFWTQPNS
WHHFMSDHIVTFSVIPLSAGETLVRTKWLVHRDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYEPGPYSPY
TEGLVEKFCEWYVGRLAAHIGA

Sequences:

>Translated_422_residues
MDARNPEQTMKVSADVRALVARRKAGYSLEAPFYLSDEIFALDMDAIFRRHWIQMGVEPDVPEPGDYVTVQLGGDSILIV
RDDDMQVRAFHNVCRHRGARLCNEEKGSVGNIVCPYHSWTYNLTGQLMFAEHMGEKFDRCKHSLKPVHLENLAGLLFVCL
ADEPPVDFATMRAAMEPYLLPHDLPNTKIAAQIDIVEKGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPANAE
GMAAFERTCVERAAQWEALNLPSVEVERLTDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADLGGLSFWTQPNS
WHHFMSDHIVTFSVIPLSAGETLVRTKWLVHRDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYEPGPYSPY
TEGLVEKFCEWYVGRLAAHIGA
>Mature_422_residues
MDARNPEQTMKVSADVRALVARRKAGYSLEAPFYLSDEIFALDMDAIFRRHWIQMGVEPDVPEPGDYVTVQLGGDSILIV
RDDDMQVRAFHNVCRHRGARLCNEEKGSVGNIVCPYHSWTYNLTGQLMFAEHMGEKFDRCKHSLKPVHLENLAGLLFVCL
ADEPPVDFATMRAAMEPYLLPHDLPNTKIAAQIDIVEKGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPANAE
GMAAFERTCVERAAQWEALNLPSVEVERLTDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFRQADLGGLSFWTQPNS
WHHFMSDHIVTFSVIPLSAGETLVRTKWLVHRDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYEPGPYSPY
TEGLVEKFCEWYVGRLAAHIGA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=216, Percent_Identity=32.8703703703704, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1788888, Length=96, Percent_Identity=35.4166666666667, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 47588; Mature: 47588

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARNPEQTMKVSADVRALVARRKAGYSLEAPFYLSDEIFALDMDAIFRRHWIQMGVEPD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEECHHHHHHHHHHHCCCCCC
VPEPGDYVTVQLGGDSILIVRDDDMQVRAFHNVCRHRGARLCNEEKGSVGNIVCPYHSWT
CCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEE
YNLTGQLMFAEHMGEKFDRCKHSLKPVHLENLAGLLFVCLADEPPVDFATMRAAMEPYLL
EECCEEEEEHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCC
PHDLPNTKIAAQIDIVEKGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPANAE
CCCCCCCEEEEEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCC
GMAAFERTCVERAAQWEALNLPSVEVERLTDVTGFRTQRLPLDRSGESQTLDAKVASKKL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHH
LGEFRQADLGGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGETLVRTKWLVHRDAKEGIDY
HHHHHHCCCCCEEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCHHHCCCC
DVKNLTAVWNATNDQDRALVEFSQRGAASSAYEPGPYSPYTEGLVEKFCEWYVGRLAAHI
CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GA
CC
>Mature Secondary Structure
MDARNPEQTMKVSADVRALVARRKAGYSLEAPFYLSDEIFALDMDAIFRRHWIQMGVEPD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEECHHHHHHHHHHHCCCCCC
VPEPGDYVTVQLGGDSILIVRDDDMQVRAFHNVCRHRGARLCNEEKGSVGNIVCPYHSWT
CCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEE
YNLTGQLMFAEHMGEKFDRCKHSLKPVHLENLAGLLFVCLADEPPVDFATMRAAMEPYLL
EECCEEEEEHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCC
PHDLPNTKIAAQIDIVEKGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPANAE
CCCCCCCEEEEEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCC
GMAAFERTCVERAAQWEALNLPSVEVERLTDVTGFRTQRLPLDRSGESQTLDAKVASKKL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHH
LGEFRQADLGGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGETLVRTKWLVHRDAKEGIDY
HHHHHHCCCCCEEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHHCCCHHHCCCC
DVKNLTAVWNATNDQDRALVEFSQRGAASSAYEPGPYSPYTEGLVEKFCEWYVGRLAAHI
CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]