Click here to switch to the map view.

The map label for this gene is nrtC [H]

Identifier: 126447320

GI number: 126447320

Start: 1221046

End: 1222107

Strand: Direct

Name: nrtC [H]

Synonym: BMA10247_A1257

Alternate gene names: 126447320

Gene position: 1221046-1222107 (Clockwise)

Preceding gene: 126447845

Following gene: 126447606

Centisome position: 51.9

GC content: 72.69

Gene sequence:

>1062_bases
ATGAACACAGCGCGCATCAAAGCAGCGGCCGCCGATATGCCGGAACGCGCCCGCCTGCGCATCGGCTTCGTCGCGCTGAG
CGACGCCGCGCCGCTCGTCGCCGCGCAGCGGCTCGAGCTCGGCGCACGCTACGGCTTGACGCTCGAGCTCTGCCGGCAGC
CGTCGTGGGCGAGCATTCGCGACAAGCTGCTGTCGGGCGAGCTCGACGCCGCGCACGCGCTGTACGGCCTCGTCTACGGC
GTGCAGCTCGGCATCGGCGGGCCGCGCGCCGACCTGGCGGTGCCGATGGTGCTGAACCGCAACGGCCAGGCGATCACGTT
CTCGAACCGGCTCGCCGACGCGTACCGCGCGTCGGGCGAGCTGAAGGCCGCGCTCGCGACACTCGGCCGGCGCCCCGTGT
TCGCGCAGACGTTCCCGACCGGCACGCATGCGATGTGGCTGTATCACTGGCTCGCGTCGCACGGCGTCGATCCGCTGCGC
GATGTCCGCAGCGTCGTGATTCCGCCGCCGGAGATGGTGGACGCACTCGCGGCGGGCGAACTCGACGGGCTGTGCGTGGG
CGAGCCGTGGAATGCGGTCGCCGAGGCGCGCGGCGCGGGCAGGACGGTCGCGGCGACGAGCGAAGTGTGGCCCGACCATC
CGGAAAAGGCGCTCGCGTGCCGGCGCGAGTTCGTCGCACTGTACCCGAATGCCGCGCGACTGCTCGTGCGCACGCTGCTC
GACGCGTGCGCGTGGCTCGACGATCCGGCGCATCGGATGCAGGCGGCCCGATGGCTCGCGCAGCCGGACACGATCGGCGT
GCCCGTCGAACAGATCGCGCCGCGGCTGCTCGGCGATTACGGCGCCGGGCCGTTCGCGCAGCCGCCCGCGCCGATCCGCT
TTCACGCCCACGGCACGGCGAACCGGCCGGCGGCGAGCGATGGTTTGTGGTTCCTGTCGCAGTATCGGCGCTGGGGGATG
CTGAGCGGCGACGTCGACGATGCGGCGATCGCGAACGGCGTCGCGCACACGGCGCTCTACGACGAAGCGGTCGCGCTCGG
AGGGGCACGACGCGGCGAGTGA

Upstream 100 bases:

>100_bases
CGCTGCGCCGCAGCGCGATGGATCAGGGCATCCGGATCGTCGAGGCGGCCCGCCGGCTGCTCGCGGCGCACTCGCAATCT
TGAACGAAGGTGCAAAACGC

Downstream 100 bases:

>100_bases
AGCGGCGCGTTTGACGCGGCGCGCATCACGCATCGCGCATCACAAGGCGCGCACCGCGCGGCGGACTTCGCGCACGATCC
GCGCCGCTCGCTGTGCCCGT

Product: putative regulatory protein NasS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIRDKLLSGELDAAHALYGLVYG
VQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGELKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLR
DVRSVVIPPPEMVDALAAGELDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNAARLLVRTLL
DACAWLDDPAHRMQAARWLAQPDTIGVPVEQIAPRLLGDYGAGPFAQPPAPIRFHAHGTANRPAASDGLWFLSQYRRWGM
LSGDVDDAAIANGVAHTALYDEAVALGGARRGE

Sequences:

>Translated_353_residues
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIRDKLLSGELDAAHALYGLVYG
VQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGELKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLR
DVRSVVIPPPEMVDALAAGELDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNAARLLVRTLL
DACAWLDDPAHRMQAARWLAQPDTIGVPVEQIAPRLLGDYGAGPFAQPPAPIRFHAHGTANRPAASDGLWFLSQYRRWGM
LSGDVDDAAIANGVAHTALYDEAVALGGARRGE
>Mature_353_residues
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIRDKLLSGELDAAHALYGLVYG
VQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGELKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLR
DVRSVVIPPPEMVDALAAGELDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNAARLLVRTLL
DACAWLDDPAHRMQAARWLAQPDTIGVPVEQIAPRLLGDYGAGPFAQPPAPIRFHAHGTANRPAASDGLWFLSQYRRWGM
LSGDVDDAAIANGVAHTALYDEAVALGGARRGE

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 37867; Mature: 37867

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIR
CCCCCEEHHHCCCCCHHEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHH
DKLLSGELDAAHALYGLVYGVQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGE
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCH
LKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLRDVRSVVIPPPEMVDALAAGE
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCC
LDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNAARLLVRTLL
CCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
DACAWLDDPAHRMQAARWLAQPDTIGVPVEQIAPRLLGDYGAGPFAQPPAPIRFHAHGTA
HHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
NRPAASDGLWFLSQYRRWGMLSGDVDDAAIANGVAHTALYDEAVALGGARRGE
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTARIKAAAADMPERARLRIGFVALSDAAPLVAAQRLELGARYGLTLELCRQPSWASIR
CCCCCEEHHHCCCCCHHEEEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHCCCCHHHHH
DKLLSGELDAAHALYGLVYGVQLGIGGPRADLAVPMVLNRNGQAITFSNRLADAYRASGE
HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCH
LKAALATLGRRPVFAQTFPTGTHAMWLYHWLASHGVDPLRDVRSVVIPPPEMVDALAAGE
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCC
LDGLCVGEPWNAVAEARGAGRTVAATSEVWPDHPEKALACRREFVALYPNAARLLVRTLL
CCCEEECCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
DACAWLDDPAHRMQAARWLAQPDTIGVPVEQIAPRLLGDYGAGPFAQPPAPIRFHAHGTA
HHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
NRPAASDGLWFLSQYRRWGMLSGDVDDAAIANGVAHTALYDEAVALGGARRGE
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]