Click here to switch to the map view.

The map label for this gene is yqhA [C]

Identifier: 126447234

GI number: 126447234

Start: 1994334

End: 1994942

Strand: Direct

Name: yqhA [C]

Synonym: BMA10247_A2057

Alternate gene names: 126447234

Gene position: 1994334-1994942 (Clockwise)

Preceding gene: 126446981

Following gene: 126447924

Centisome position: 84.77

GC content: 64.7

Gene sequence:

>609_bases
ATGTCCGCCGCCCCGACCGATCCGCGCGCCGCCCGCCCGGCCCGCCGCAAGATGCGCCCGTTGCCAGCCGTCATCTTCAT
GAGCCGCTGGCTGCAGGTTCCCCTTTATCTGGGCCTGATCGTCGCGCAGGCGATCTACGTGTTCCTGTTCCTGAAGGAAG
TGTGGCACCTGCTGTCGCACGCGACGGGCCTCGACGAGACGAACATCATGCTCGCCGTGCTCGGCCTCATCGACGTGGTG
ATGATCTCGAACCTGCTCATCATGGTGATCGTCGGCGGATATGAAACTTTCGTGTCGCGCCTGGGCGTCGAGGGGCACCC
CGACGAGCCGGAATGGCTCGACCACGTGAACGCGGGCGTGCTGAAAGTGAAGCTGTCGATGGCGCTCATCAGCATCTCGT
CGATCCATCTGCTGAAGACGTTCATCAATCCGGACCAGCACACGACGCACGCGATCATGTGGCAGGTGCTGATCCACGTC
GCGTTCCTCGTGTCGGCGCTCGTGATGGCGTGGGTCGACCGCCTGACGACGCATACGCACCCCGAGCATTTCCACGAAGC
GTCGACGCCACCGTCGGCGCCGCGCGAGCCGGCGCAACAGTCGGCCTGA

Upstream 100 bases:

>100_bases
CGCGATGCCGCGCCGCTGCAAGCCGCCCGGCCGACGCGTTACAATAACGCGCTTTTTTTCAAAAACGCTCCATATCCCCG
CATCCCCGCTTCGCCCGACC

Downstream 100 bases:

>100_bases
GTCGATTCCCATACCCACCGTCCTCACCGAGCCTCAGCCATGACCGTCATCAAACAGGAAGACCTGATCCAGAGCATCGC
GGATTCGCTGCAGTACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSAAPTDPRAARPARRKMRPLPAVIFMSRWLQVPLYLGLIVAQAIYVFLFLKEVWHLLSHATGLDETNIMLAVLGLIDVV
MISNLLIMVIVGGYETFVSRLGVEGHPDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFINPDQHTTHAIMWQVLIHV
AFLVSALVMAWVDRLTTHTHPEHFHEASTPPSAPREPAQQSA

Sequences:

>Translated_202_residues
MSAAPTDPRAARPARRKMRPLPAVIFMSRWLQVPLYLGLIVAQAIYVFLFLKEVWHLLSHATGLDETNIMLAVLGLIDVV
MISNLLIMVIVGGYETFVSRLGVEGHPDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFINPDQHTTHAIMWQVLIHV
AFLVSALVMAWVDRLTTHTHPEHFHEASTPPSAPREPAQQSA
>Mature_201_residues
SAAPTDPRAARPARRKMRPLPAVIFMSRWLQVPLYLGLIVAQAIYVFLFLKEVWHLLSHATGLDETNIMLAVLGLIDVVM
ISNLLIMVIVGGYETFVSRLGVEGHPDEPEWLDHVNAGVLKVKLSMALISISSIHLLKTFINPDQHTTHAIMWQVLIHVA
FLVSALVMAWVDRLTTHTHPEHFHEASTPPSAPREPAQQSA

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=162, Percent_Identity=37.6543209876543, Blast_Score=127, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 22526; Mature: 22395

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPTDPRAARPARRKMRPLPAVIFMSRWLQVPLYLGLIVAQAIYVFLFLKEVWHLLSH
CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGLDETNIMLAVLGLIDVVMISNLLIMVIVGGYETFVSRLGVEGHPDEPEWLDHVNAGV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCCH
LKVKLSMALISISSIHLLKTFINPDQHTTHAIMWQVLIHVAFLVSALVMAWVDRLTTHTH
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEHFHEASTPPSAPREPAQQSA
HHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAAPTDPRAARPARRKMRPLPAVIFMSRWLQVPLYLGLIVAQAIYVFLFLKEVWHLLSH
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGLDETNIMLAVLGLIDVVMISNLLIMVIVGGYETFVSRLGVEGHPDEPEWLDHVNAGV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCCH
LKVKLSMALISISSIHLLKTFINPDQHTTHAIMWQVLIHVAFLVSALVMAWVDRLTTHTH
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEHFHEASTPPSAPREPAQQSA
HHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]