Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is hmuS [H]
Identifier: 126446611
GI number: 126446611
Start: 2022932
End: 2024083
Strand: Direct
Name: hmuS [H]
Synonym: BMA10247_A2090
Alternate gene names: 126446611
Gene position: 2022932-2024083 (Clockwise)
Preceding gene: 126446338
Following gene: 126447939
Centisome position: 85.98
GC content: 72.14
Gene sequence:
>1152_bases ATGATGAACACCGCCGCCCCCGCCGCTTCGCCCGCCCGCGCGCTCGCGCCCGACGAGCTGCGCGACGCGTTCCTGCACCT GAAAGAAACCCGCAAGCTGCGCAACCGCGACGTCGCGCAACTGCTCGGCGTGAGCGAAGGCGAGGCGCTCGCCGCCTTCG CGGGCGAGCGCGTCGTGCGGCTCGAATCGAGCTTCGTCGAGCTGTTCGAGGAGATGCCGCGCTTAGGCGGCGTGATGGCG CTCACGCGCAACGCGGCCGCCGTGCACGAGAAGGACGGCGCGTTCGAGCAGATGAGCCACGACGGCCCGGTCGGCCTCGC GCTCGGCGCGATCGACCTGCGCATCTTCTACCGCAACTGGGCGGCCGGGTTCGCCGTCTACGAGCCGACCGCGCACGGCG TGATGAAGAGCCTGCAGTTCTTCGACGCGCAGGGCGACGCGGTGCACAAGGTCTACCTGCGCAAGCACAGCGATCACGCC GCGTTCGACGCGTTCGTGTCGCGCTGGCGGATGCCCGTGCAATCGCCGGCGTTCGCGGTCGAGCCCGCGCCGCCCGCGCA TGTCGAACGGCCCGACGGCGAGATCGACGCCGCGGGGCTGCGCGCCGCGTGGGACGCGATGACGGATACGCACCAGTTCC ACGGCGTCGTGCGCCGCCACGGCGTGTCGCGCACGCAGGCGCTGCGGCTCGCCGGCGCGTCGCGCGCGCATCGCGTCGCG ACCGACGCGGCGCGGCGCGTGCTGGAGCGCGCCGCGCAGACGCGGCTGCCGATCATGGTGTTCGTCGGCAACCGCGGCAT GATCCAGATCCACACCGGCGCCGTGACGAACATCCGCCGCATGGGCACGTGGATCAACGTGCTCGACGAGGATTTCAACC TGCATCTGCGCGAGGATCTCGTCGCGTCCGCGTGGGTCGTGAGAAAGCCGACGAGCGACGGCGCCGTCACGTCGGTCGAG CTGTTCGACGCGGCGGGCGACAACATCGCGATGTTGTTCGGCGCGCGCAAGCCCGGACAGCCGGAACTCGCGGGCTGGCG CGAACTGGCGGGCGCGCTGCCGAGGCTCGACACGGCGGATGCGGCGGATGCGGCGACCGTCGCGCATGCCGCCGACGTCC CCGTCGCGACCGACGCCGGAGCCGCGCGATGA
Upstream 100 bases:
>100_bases CCCCGGGCCGCAGCGTCGCGGTCAGCATGAAGGTGGATTTCTGATGCGGCCCGCACGCTTTTTTCCCAACCCGACCGCCC GGCAATCGAGGATCTCCGAC
Downstream 100 bases:
>100_bases GCAAGCCGCCGCGCATCGATGCCCGCCGGCGCGCGTGGCTCGCGGGCACGGGCGCGCTCGTGTTCGCGGCCGCGCATCCG GGCGCGTTCGCGCGCGCGCC
Product: hemin transport protein HmuS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MMNTAAPAASPARALAPDELRDAFLHLKETRKLRNRDVAQLLGVSEGEALAAFAGERVVRLESSFVELFEEMPRLGGVMA LTRNAAAVHEKDGAFEQMSHDGPVGLALGAIDLRIFYRNWAAGFAVYEPTAHGVMKSLQFFDAQGDAVHKVYLRKHSDHA AFDAFVSRWRMPVQSPAFAVEPAPPAHVERPDGEIDAAGLRAAWDAMTDTHQFHGVVRRHGVSRTQALRLAGASRAHRVA TDAARRVLERAAQTRLPIMVFVGNRGMIQIHTGAVTNIRRMGTWINVLDEDFNLHLREDLVASAWVVRKPTSDGAVTSVE LFDAAGDNIAMLFGARKPGQPELAGWRELAGALPRLDTADAADAATVAHAADVPVATDAGAAR
Sequences:
>Translated_383_residues MMNTAAPAASPARALAPDELRDAFLHLKETRKLRNRDVAQLLGVSEGEALAAFAGERVVRLESSFVELFEEMPRLGGVMA LTRNAAAVHEKDGAFEQMSHDGPVGLALGAIDLRIFYRNWAAGFAVYEPTAHGVMKSLQFFDAQGDAVHKVYLRKHSDHA AFDAFVSRWRMPVQSPAFAVEPAPPAHVERPDGEIDAAGLRAAWDAMTDTHQFHGVVRRHGVSRTQALRLAGASRAHRVA TDAARRVLERAAQTRLPIMVFVGNRGMIQIHTGAVTNIRRMGTWINVLDEDFNLHLREDLVASAWVVRKPTSDGAVTSVE LFDAAGDNIAMLFGARKPGQPELAGWRELAGALPRLDTADAADAATVAHAADVPVATDAGAAR >Mature_383_residues MMNTAAPAASPARALAPDELRDAFLHLKETRKLRNRDVAQLLGVSEGEALAAFAGERVVRLESSFVELFEEMPRLGGVMA LTRNAAAVHEKDGAFEQMSHDGPVGLALGAIDLRIFYRNWAAGFAVYEPTAHGVMKSLQFFDAQGDAVHKVYLRKHSDHA AFDAFVSRWRMPVQSPAFAVEPAPPAHVERPDGEIDAAGLRAAWDAMTDTHQFHGVVRRHGVSRTQALRLAGASRAHRVA TDAARRVLERAAQTRLPIMVFVGNRGMIQIHTGAVTNIRRMGTWINVLDEDFNLHLREDLVASAWVVRKPTSDGAVTSVE LFDAAGDNIAMLFGARKPGQPELAGWRELAGALPRLDTADAADAATVAHAADVPVATDAGAAR
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG3720
COG function: function code P; Putative heme degradation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To Y.enterocolitica hemS [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007845 [H]
Pfam domain/function: PF05171 HemS [H]
EC number: NA
Molecular weight: Translated: 41432; Mature: 41432
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTAAPAASPARALAPDELRDAFLHLKETRKLRNRDVAQLLGVSEGEALAAFAGERVVR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCCHHEE LESSFVELFEEMPRLGGVMALTRNAAAVHEKDGAFEQMSHDGPVGLALGAIDLRIFYRNW HHHHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCHHHHCCCCCCEEEEHHEEEEEEEEHH AAGFAVYEPTAHGVMKSLQFFDAQGDAVHKVYLRKHSDHAAFDAFVSRWRMPVQSPAFAV HCCEEEECCHHHHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCEEE EPAPPAHVERPDGEIDAAGLRAAWDAMTDTHQFHGVVRRHGVSRTQALRLAGASRAHRVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH TDAARRVLERAAQTRLPIMVFVGNRGMIQIHTGAVTNIRRMGTWINVLDEDFNLHLREDL HHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHH VASAWVVRKPTSDGAVTSVELFDAAGDNIAMLFGARKPGQPELAGWRELAGALPRLDTAD HHHHHEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCC AADAATVAHAADVPVATDAGAAR CCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MMNTAAPAASPARALAPDELRDAFLHLKETRKLRNRDVAQLLGVSEGEALAAFAGERVVR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCCHHEE LESSFVELFEEMPRLGGVMALTRNAAAVHEKDGAFEQMSHDGPVGLALGAIDLRIFYRNW HHHHHHHHHHHHHHHCCEEEECCCCHHHHCCCCCHHHHCCCCCCEEEEHHEEEEEEEEHH AAGFAVYEPTAHGVMKSLQFFDAQGDAVHKVYLRKHSDHAAFDAFVSRWRMPVQSPAFAV HCCEEEECCHHHHHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCCCCCEEE EPAPPAHVERPDGEIDAAGLRAAWDAMTDTHQFHGVVRRHGVSRTQALRLAGASRAHRVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHH TDAARRVLERAAQTRLPIMVFVGNRGMIQIHTGAVTNIRRMGTWINVLDEDFNLHLREDL HHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHHH VASAWVVRKPTSDGAVTSVELFDAAGDNIAMLFGARKPGQPELAGWRELAGALPRLDTAD HHHHHEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCC AADAATVAHAADVPVATDAGAAR CCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]