Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is kshA [H]

Identifier: 126446577

GI number: 126446577

Start: 1047509

End: 1048513

Strand: Reverse

Name: kshA [H]

Synonym: BMA10247_A1112

Alternate gene names: 126446577

Gene position: 1048513-1047509 (Counterclockwise)

Preceding gene: 126446999

Following gene: 126445664

Centisome position: 44.57

GC content: 64.48

Gene sequence:

>1005_bases
ATGAACGGCACTCAGCGATTTCCGATGGACATCCCATTCGGCTGGTTCTGCATCGGCTATAGCGACGAAGTGGCGGTCGG
CGACGTCAAGCCGCTGCGCTATTTCGGCAAGGATCTCGTGATGTTTCGCGGCGAATCGGGCGAGATCGGCGTGCTCGACG
CCTACTGCCCGCACCTGGGCGCGCACATGGGCCACGGCGGCACGGTCGAGGGCGATTCGCTGCGCTGCCCGTTTCACCAC
TGGGCCTATCGCAAGGACGGTTTCTGCACGAGCATTCCGTACGCGAAGGAAATGCCGCTGATCGCGAAGCGCGAGCCGAT
CGCGGTGCCGTATCCGGTCGTCGAGCGCAACGGCGCGATCTGGGTCTGGCACCATCCGCAGCAGATCGCCCCGACCTACG
AGGTGCTCGAGCACGAGGAATTCGTCGCGCCGGGCTGGAGCAAGCCCGTGCGCCGCTTCTGGTCGTTCGCGAGCAATCCT
CAGGAAATCGCCGAGAACGGCGTCGATACCGCGCACTTCAAGTGCATCCATCACATGGACGCGATGCCGGAGGGCGAAGT
GACCTACGAAGGCCACATTCGCCGCAGCCGCACGACGGGCGAGACCTCGATGATCTTTCCCGACGGCGTCACGCGCACGG
TCGAGACGGGCACGAACGTGATCAACAGCGGCGCCGGGCAGAAGATCTCCCGCTTCACCGGCTTCGTCACGATCTCGCTG
ATGGAGATGGCGACGCCCGTCGAAGCGGACCAGGTCGAGCTGCGTTTCTGCTTCGCGTTTCCGGAATGCCCCGAAGGCTC
GCCCGAATGGCAGGGCGCGATGAACACGATCGACTACTTCAGCGGCCAGCTCGGCATCGAAGGCGGCGACATCCCGATCT
GGTCGCACAAGATCCATCGCGAGAAACCGATCCTCTGCGACGGCGACGGCGCGATCATGCGCTTTCGCCGCTACTTCGAG
CAGTTCTACGCGCCGCGCGTCGTGCCGGTGACGGCATCCGCCTGA

Upstream 100 bases:

>100_bases
GCCGGGCCGCGTCGCGGCGGAACGCCGCCGCCTCATCGGGAAAACGAAGCAGTTCTAACCAGCAGCATCCACACCGACAA
TACTGAAGCGAGGGAATGAA

Downstream 100 bases:

>100_bases
CGCAGTCCTCATCGAATCGCCGATCGACCGACGGGCCGCGGACCCTCGAGGCGCCAGGGCGCCGCGCGCCGCCCGTCATT
CGCCGGCTCATCCCGGCCGC

Product: Rieske family iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: Rieske-type oxygenase; RO [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLGAHMGHGGTVEGDSLRCPFHH
WAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAIWVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNP
QEIAENGVDTAHFKCIHHMDAMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL
MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHREKPILCDGDGAIMRFRRYFE
QFYAPRVVPVTASA

Sequences:

>Translated_334_residues
MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLGAHMGHGGTVEGDSLRCPFHH
WAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAIWVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNP
QEIAENGVDTAHFKCIHHMDAMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL
MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHREKPILCDGDGAIMRFRRYFE
QFYAPRVVPVTASA
>Mature_334_residues
MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLGAHMGHGGTVEGDSLRCPFHH
WAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAIWVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNP
QEIAENGVDTAHFKCIHHMDAMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL
MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHREKPILCDGDGAIMRFRRYFE
QFYAPRVVPVTASA

Specific function: Catalyzes the opening of ring B of 1,4-androstadiene- 3,17,-dione (ADD) and 4-androstene-3,17-dione (ADD) with concomitant aromatization of ring A. The ring B is subsequently hydroxylated to yield a catechol and then subject to meta- cleavage [H]

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71983709, Length=173, Percent_Identity=34.1040462427746, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI161085896, Length=353, Percent_Identity=28.8951841359773, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 37555; Mature: 37555

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLG
CCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHCCEEEEEECCCCCEEEEHHHHHHHH
AHMGHGGTVEGDSLRCPFHHWAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAI
HHCCCCCCCCCCCEECCHHHHCCCCCCCEECCCCHHCCCCEECCCCCCCCCCEEECCCEE
WVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNPQEIAENGVDTAHFKCIHHMD
EEEECCHHHCCHHHHHCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHC
AMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL
CCCCCCEEEECCEEECCCCCCEEEECCCCCCEEHHHCCHHHHCCCCCHHHHHHHEEEEEE
MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHR
EHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCEECHHHCC
EKPILCDGDGAIMRFRRYFEQFYAPRVVPVTASA
CCCCEECCCHHHHHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLG
CCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHCCEEEEEECCCCCEEEEHHHHHHHH
AHMGHGGTVEGDSLRCPFHHWAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAI
HHCCCCCCCCCCCEECCHHHHCCCCCCCEECCCCHHCCCCEECCCCCCCCCCEEECCCEE
WVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNPQEIAENGVDTAHFKCIHHMD
EEEECCHHHCCHHHHHCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHC
AMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL
CCCCCCEEEECCEEECCCCCCEEEECCCCCCEEHHHCCHHHHCCCCCHHHHHHHEEEEEE
MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHR
EHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCEECHHHCC
EKPILCDGDGAIMRFRRYFEQFYAPRVVPVTASA
CCCCEECCCHHHHHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA