Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is kshA [H]
Identifier: 126446577
GI number: 126446577
Start: 1047509
End: 1048513
Strand: Reverse
Name: kshA [H]
Synonym: BMA10247_A1112
Alternate gene names: 126446577
Gene position: 1048513-1047509 (Counterclockwise)
Preceding gene: 126446999
Following gene: 126445664
Centisome position: 44.57
GC content: 64.48
Gene sequence:
>1005_bases ATGAACGGCACTCAGCGATTTCCGATGGACATCCCATTCGGCTGGTTCTGCATCGGCTATAGCGACGAAGTGGCGGTCGG CGACGTCAAGCCGCTGCGCTATTTCGGCAAGGATCTCGTGATGTTTCGCGGCGAATCGGGCGAGATCGGCGTGCTCGACG CCTACTGCCCGCACCTGGGCGCGCACATGGGCCACGGCGGCACGGTCGAGGGCGATTCGCTGCGCTGCCCGTTTCACCAC TGGGCCTATCGCAAGGACGGTTTCTGCACGAGCATTCCGTACGCGAAGGAAATGCCGCTGATCGCGAAGCGCGAGCCGAT CGCGGTGCCGTATCCGGTCGTCGAGCGCAACGGCGCGATCTGGGTCTGGCACCATCCGCAGCAGATCGCCCCGACCTACG AGGTGCTCGAGCACGAGGAATTCGTCGCGCCGGGCTGGAGCAAGCCCGTGCGCCGCTTCTGGTCGTTCGCGAGCAATCCT CAGGAAATCGCCGAGAACGGCGTCGATACCGCGCACTTCAAGTGCATCCATCACATGGACGCGATGCCGGAGGGCGAAGT GACCTACGAAGGCCACATTCGCCGCAGCCGCACGACGGGCGAGACCTCGATGATCTTTCCCGACGGCGTCACGCGCACGG TCGAGACGGGCACGAACGTGATCAACAGCGGCGCCGGGCAGAAGATCTCCCGCTTCACCGGCTTCGTCACGATCTCGCTG ATGGAGATGGCGACGCCCGTCGAAGCGGACCAGGTCGAGCTGCGTTTCTGCTTCGCGTTTCCGGAATGCCCCGAAGGCTC GCCCGAATGGCAGGGCGCGATGAACACGATCGACTACTTCAGCGGCCAGCTCGGCATCGAAGGCGGCGACATCCCGATCT GGTCGCACAAGATCCATCGCGAGAAACCGATCCTCTGCGACGGCGACGGCGCGATCATGCGCTTTCGCCGCTACTTCGAG CAGTTCTACGCGCCGCGCGTCGTGCCGGTGACGGCATCCGCCTGA
Upstream 100 bases:
>100_bases GCCGGGCCGCGTCGCGGCGGAACGCCGCCGCCTCATCGGGAAAACGAAGCAGTTCTAACCAGCAGCATCCACACCGACAA TACTGAAGCGAGGGAATGAA
Downstream 100 bases:
>100_bases CGCAGTCCTCATCGAATCGCCGATCGACCGACGGGCCGCGGACCCTCGAGGCGCCAGGGCGCCGCGCGCCGCCCGTCATT CGCCGGCTCATCCCGGCCGC
Product: Rieske family iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Rieske-type oxygenase; RO [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLGAHMGHGGTVEGDSLRCPFHH WAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAIWVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNP QEIAENGVDTAHFKCIHHMDAMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHREKPILCDGDGAIMRFRRYFE QFYAPRVVPVTASA
Sequences:
>Translated_334_residues MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLGAHMGHGGTVEGDSLRCPFHH WAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAIWVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNP QEIAENGVDTAHFKCIHHMDAMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHREKPILCDGDGAIMRFRRYFE QFYAPRVVPVTASA >Mature_334_residues MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLGAHMGHGGTVEGDSLRCPFHH WAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAIWVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNP QEIAENGVDTAHFKCIHHMDAMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHREKPILCDGDGAIMRFRRYFE QFYAPRVVPVTASA
Specific function: Catalyzes the opening of ring B of 1,4-androstadiene- 3,17,-dione (ADD) and 4-androstene-3,17-dione (ADD) with concomitant aromatization of ring A. The ring B is subsequently hydroxylated to yield a catechol and then subject to meta- cleavage [H]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71983709, Length=173, Percent_Identity=34.1040462427746, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI161085896, Length=353, Percent_Identity=28.8951841359773, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 37555; Mature: 37555
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLG CCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHCCEEEEEECCCCCEEEEHHHHHHHH AHMGHGGTVEGDSLRCPFHHWAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAI HHCCCCCCCCCCCEECCHHHHCCCCCCCEECCCCHHCCCCEECCCCCCCCCCEEECCCEE WVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNPQEIAENGVDTAHFKCIHHMD EEEECCHHHCCHHHHHCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHC AMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL CCCCCCEEEECCEEECCCCCCEEEECCCCCCEEHHHCCHHHHCCCCCHHHHHHHEEEEEE MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHR EHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCEECHHHCC EKPILCDGDGAIMRFRRYFEQFYAPRVVPVTASA CCCCEECCCHHHHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MNGTQRFPMDIPFGWFCIGYSDEVAVGDVKPLRYFGKDLVMFRGESGEIGVLDAYCPHLG CCCCCCCCCCCCCCEEEECCCCCEECCCCHHHHHHCCEEEEEECCCCCEEEEHHHHHHHH AHMGHGGTVEGDSLRCPFHHWAYRKDGFCTSIPYAKEMPLIAKREPIAVPYPVVERNGAI HHCCCCCCCCCCCEECCHHHHCCCCCCCEECCCCHHCCCCEECCCCCCCCCCEEECCCEE WVWHHPQQIAPTYEVLEHEEFVAPGWSKPVRRFWSFASNPQEIAENGVDTAHFKCIHHMD EEEECCHHHCCHHHHHCCHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHC AMPEGEVTYEGHIRRSRTTGETSMIFPDGVTRTVETGTNVINSGAGQKISRFTGFVTISL CCCCCCEEEECCEEECCCCCCEEEECCCCCCEEHHHCCHHHHCCCCCHHHHHHHEEEEEE MEMATPVEADQVELRFCFAFPECPEGSPEWQGAMNTIDYFSGQLGIEGGDIPIWSHKIHR EHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEECCCCCCCCEECHHHCC EKPILCDGDGAIMRFRRYFEQFYAPRVVPVTASA CCCCEECCCHHHHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA