Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446999
Identifier: 126446999
GI number: 126446999
Start: 1048679
End: 1050292
Strand: Reverse
Name: 126446999
Synonym: BMA10247_A1113
Alternate gene names: NA
Gene position: 1050292-1048679 (Counterclockwise)
Preceding gene: 126447561
Following gene: 126446577
Centisome position: 44.64
GC content: 67.66
Gene sequence:
>1614_bases ATGGGCGACTATCTGGCGCAGGACGTGCGTATCGAGCGGATCACGGTTCGCGATCCCGAGGCGCGGACATGGTTCGATCG CGGTCTGCTGTGGGCATACGGATTCAATTTCGAAGCCGCGGTCGATTGCTTTCAGGAAGCGGCGCGGATCGATCCGGATT GCGTGCTCGCCTACTGGGGCATCGCGTACGCGTCGGGCTGCAATTACAACAAGCAGTGGAAGGTGTTTCATCCGCGGATG ATCGCGCGCTGCATGAAGCTCGCGCGCGACGCGATCCGGCGCGCGCAGGCGTGCCGGGCGGGCGCGAGCGCGCTGGAGAT GGCGCTCGTGCGCGCGATCGAGTGCCGCTTCCAGGCCGAGGGCGCCCATGACGAAGCGCTGCTGCGGCGTTGGAACGACG ACTACGCCCGCGCGATGCGCGACGTCTATCTGTCCTGCCCCGACAATCTCGATGTCGCCGCGCTGTTCGCGGACGCGCTG ATCAATCGCACGCCGTGGAAGCTCTGGGACATGTCGAGCGGCAAGACCGCCGACGGCGCCGATACCGACGAGGCGATCGC GGTTCTCGAGCGCGCGCTCGCGCAGGTCGACGCGAACGGCCTCGCCCCGCATCCGGGGCTGCTGCACGTCTACATCCACA CGATCGAAATGTCGCCGACGCCGGAGAAGGCGCTTCGCGCGGCCGACGCACTGCGCGATCTCGCGCCCGACGTCGGCCAT CTGCTGCACATGGCCTCGCACATCGACATTCTTTGCGGCCACTACCACGACGCGATCGTCGCGAACGACCGCGCAATCGC CGCCAACCAGCGTGTGCTCGACCGCCATCCGCAGTGGCTCGAATTCCGGCTGTACTGCGTGCACGACATCCATTTCAAGA TCTATGCGGCGATGATGCTCGGCCGTTTCTCGGCGGCGTGGCAAGGGGTGCTCGAGCTCGAGGCGCTGATCACGGAAGCG CTGCTGCGCGTCGAGCAGCCGCCGATGGCCTACCTCCTCGAAGGCTTCCTGTCGGTGCGCGTGCACGTGCTGATCCGGTT CGGCAAATGGCGCGAGATCCTCGAGCAGCCGTTCCCCGCGAACGCCGCGCTGTACTGCAACACGACCGCGATGCTCCATT ACGCGCGCGGCATCGCCTACGCGAACCTGAAGCTCGCCGGCCCCGCCGCGCAGGCGCGCCGCGCGTTCTCGATCGCCGCT TGCGTGCTCGACGGCGAGATCGCGTATCACGAGGACCGGTTCGACGAAGCGTTCGCGCATCTGCGGCGCGCGGTCGAACT CGACGACGGGCTCGAATACATGGAGCCGTGGGGCTGGATGATGCCGACGCGCCACCCGCTCGGCGCGCTGCTGCTCGCGC AAGGGCACGTCGAGGAAGCCGAGCGCGTCTATCGCGCCGATCTCGGGCTCGATTCGACGATCTACCGCTCGCTCCAGCAT CCGGGCAACGTGTGGAGCCTGCAGGGCTACGTGAGCTGCCTGCGCAGGCTCGGCAAGCACGAAACGGCGGACGCGCTGCA ACCGGCGCTCGACGTCGCGCGCGCGCGAGCCGACGTCGAGATCGGCGTGTCGTGCTTCTGCGCGGCGCCCAGCAAGCGCG GTTGCTGCCACTGA
Upstream 100 bases:
>100_bases TGAAATTGAGCATCGGATTCGGCGGCATCAACACCGCGCTCTGTCTCGAGCGCTGTTGACGCTCGGCCGGAAACACGCTG TAGGCATGGGAAGCAGGAAC
Downstream 100 bases:
>100_bases CGCCGCGAGATCGCCTCCGGCGCGCCGCCGCGCCCGCGCCGGGCGGGCGCGAGCCCCCCGAGCGCGCCGGGCCGCGTCGC GGCGGAACGCCGCCGCCTCA
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MGDYLAQDVRIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWGIAYASGCNYNKQWKVFHPRM IARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADAL INRTPWKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKALRAADALRDLAPDVGH LLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMMLGRFSAAWQGVLELEALITEA LLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAA CVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPTRHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQH PGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGVSCFCAAPSKRGCCH
Sequences:
>Translated_537_residues MGDYLAQDVRIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWGIAYASGCNYNKQWKVFHPRM IARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADAL INRTPWKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKALRAADALRDLAPDVGH LLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMMLGRFSAAWQGVLELEALITEA LLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAA CVLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPTRHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQH PGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGVSCFCAAPSKRGCCH >Mature_536_residues GDYLAQDVRIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWGIAYASGCNYNKQWKVFHPRMI ARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAEGAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADALI NRTPWKLWDMSSGKTADGADTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKALRAADALRDLAPDVGHL LHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMMLGRFSAAWQGVLELEALITEAL LRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPANAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAAC VLDGEIAYHEDRFDEAFAHLRRAVELDDGLEYMEPWGWMMPTRHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQHP GNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGVSCFCAAPSKRGCCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60322; Mature: 60190
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDYLAQDVRIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWG CCCHHHCCCEEEEEEECCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHH IAYASGCNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAE HHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADALINRTPWKLWDMSSGKTADGA CCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCC DTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKALRAADALRDLAPDVGH CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHH LLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMML HHHHHHHHHHHHCCCCCCEEECCCEECCCCHHHHCCCCEEEEEEEEEEHHHHHHHHHHHH GRFSAAWQGVLELEALITEALLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAACVLDGEIAYHEDRFDEAFAH CEEEEECHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHEECCCHHCCHHHHHHHHHH LRRAVELDDGLEYMEPWGWMMPTRHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQH HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCC PGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGVSCFCAAPSKRGCCH CCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCC >Mature Secondary Structure GDYLAQDVRIERITVRDPEARTWFDRGLLWAYGFNFEAAVDCFQEAARIDPDCVLAYWG CCHHHCCCEEEEEEECCCCHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHH IAYASGCNYNKQWKVFHPRMIARCMKLARDAIRRAQACRAGASALEMALVRAIECRFQAE HHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAHDEALLRRWNDDYARAMRDVYLSCPDNLDVAALFADALINRTPWKLWDMSSGKTADGA CCHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCC DTDEAIAVLERALAQVDANGLAPHPGLLHVYIHTIEMSPTPEKALRAADALRDLAPDVGH CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHH LLHMASHIDILCGHYHDAIVANDRAIAANQRVLDRHPQWLEFRLYCVHDIHFKIYAAMML HHHHHHHHHHHHCCCCCCEEECCCEECCCCHHHHCCCCEEEEEEEEEEHHHHHHHHHHHH GRFSAAWQGVLELEALITEALLRVEQPPMAYLLEGFLSVRVHVLIRFGKWREILEQPFPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NAALYCNTTAMLHYARGIAYANLKLAGPAAQARRAFSIAACVLDGEIAYHEDRFDEAFAH CEEEEECHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHEECCCHHCCHHHHHHHHHH LRRAVELDDGLEYMEPWGWMMPTRHPLGALLLAQGHVEEAERVYRADLGLDSTIYRSLQH HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCC PGNVWSLQGYVSCLRRLGKHETADALQPALDVARARADVEIGVSCFCAAPSKRGCCH CCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA