Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446490
Identifier: 126446490
GI number: 126446490
Start: 1977600
End: 1978556
Strand: Reverse
Name: 126446490
Synonym: BMA10247_A2039
Alternate gene names: NA
Gene position: 1978556-1977600 (Counterclockwise)
Preceding gene: 126446086
Following gene: 126447566
Centisome position: 84.1
GC content: 72.2
Gene sequence:
>957_bases ATGCGCCTTGCCATCCGCCACATCTCGCGCTTCCGATTCGACGAACACGCGCCGCATGTGCTGCAGCGTCTGCGGCTGCG GCCGCAAAGCGGCCCGAGCCAGACCGTGCGCGCGTGGCAGGTGACGATCGACGGCGTCGAGCCGACGCTCACTTACGCGG ACGGCCTCGGCAATCGCGTCGATCTCGTGCGGCACGAGCGCGACAAGCCGGAGTTCGCGATCGTCGCGGCGGGCGTCGTC GAGACGCAGGATCGCGCCGGCATTCTCGGCCATATCGATGCGTATGCGCCGCCCTGGATCCACGAGCGCACGACCGATCT GACGCGCGCGGGCGAGGCGATCCGCGCGCTCGCCGAGGCGCTGCCGATCGAGCACAAGAGCCTCGACGCGCTGCACTGGC TGATGACCGAGGTGCACGGCCGCGTCGCCTACGAGCCGCGCGCGCAGACCGCGCCGCGCGACGCGGAGGCCGCGCTGCGA AGCGGTGCCGGCACGAGCCGCGATCATGCGCACGTGTTCGTCGCGGCGGCGCGCGCGCTGCGGATTCCGGCGCGCTACGT GTCCGGCTATCTGTTGACGGACGGCTCGATGCAGCGGATCGCGGAGGCGCTCCATCAGGCGAGCGGCGTCGCGCAACAGG CGATGCAGGTGCGGCGCGGCGCGCACGACGCGCACAGCGCGCCCGCGGCGCCCGACGATGCGTCGCGCCGCACGGGCGTC GCGATGCAGGAGGCCGCGGTCGCGACGCAGCCGCAATCGGGCCACGCGTGGGCCGAGGCATACGTCGAAGGGCTCGGCTG GGTCGGCTTCGATCCGTTCATGAACCGCTGCCCGGACGAGCGCTACGTACGCATCGCGGCGGGTCTCGACTATCGCGACG CGATGCCGGTGTACGGCCCGGGCGCGCAGCCGCTCGGCGTCGAGATCAGCGTGATCCAGTCCCCGGAACTCGTCTGA
Upstream 100 bases:
>100_bases TCAAGAGCGGGCTGCACGAGTTTCTGACGGATTTCATCGCCAAGAACAACAGTCTCGGCCTCGAAATCGCCCAAGCCTAC AACTTCGATTGAGGTCAGAC
Downstream 100 bases:
>100_bases TGCGCGCGGCGCAGGACGGCACGGCCAACGGCGGCGTGCGGCGCGCGATGCCGCCGCGCGCAGCCTTTCGCCGCACGCCG CGCCGCCGCGCGCCGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like; Transglutaminase-Like Superfamily Protein; Transglutaminase-Like Domain-Containing Protein; Transglutaminase-Like Protein; Transglutaminase; Transglutaminase Family Protein; Transglutaminase N-Terminal Domain Protein; Transglutaminase-Like Cysteine Protease; Transglutaminase Protein; Transglutaminase/Protease-Like Protein; Bacterial Transglutaminase-Like Domain Family Protein; Transglutaminase-Like S Cysteineprotease; Bacterial Transglutaminase Domain Family Protein; Cysteine Proteinase Transglutaminase-Like Superfamily
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MRLAIRHISRFRFDEHAPHVLQRLRLRPQSGPSQTVRAWQVTIDGVEPTLTYADGLGNRVDLVRHERDKPEFAIVAAGVV ETQDRAGILGHIDAYAPPWIHERTTDLTRAGEAIRALAEALPIEHKSLDALHWLMTEVHGRVAYEPRAQTAPRDAEAALR SGAGTSRDHAHVFVAAARALRIPARYVSGYLLTDGSMQRIAEALHQASGVAQQAMQVRRGAHDAHSAPAAPDDASRRTGV AMQEAAVATQPQSGHAWAEAYVEGLGWVGFDPFMNRCPDERYVRIAAGLDYRDAMPVYGPGAQPLGVEISVIQSPELV
Sequences:
>Translated_318_residues MRLAIRHISRFRFDEHAPHVLQRLRLRPQSGPSQTVRAWQVTIDGVEPTLTYADGLGNRVDLVRHERDKPEFAIVAAGVV ETQDRAGILGHIDAYAPPWIHERTTDLTRAGEAIRALAEALPIEHKSLDALHWLMTEVHGRVAYEPRAQTAPRDAEAALR SGAGTSRDHAHVFVAAARALRIPARYVSGYLLTDGSMQRIAEALHQASGVAQQAMQVRRGAHDAHSAPAAPDDASRRTGV AMQEAAVATQPQSGHAWAEAYVEGLGWVGFDPFMNRCPDERYVRIAAGLDYRDAMPVYGPGAQPLGVEISVIQSPELV >Mature_318_residues MRLAIRHISRFRFDEHAPHVLQRLRLRPQSGPSQTVRAWQVTIDGVEPTLTYADGLGNRVDLVRHERDKPEFAIVAAGVV ETQDRAGILGHIDAYAPPWIHERTTDLTRAGEAIRALAEALPIEHKSLDALHWLMTEVHGRVAYEPRAQTAPRDAEAALR SGAGTSRDHAHVFVAAARALRIPARYVSGYLLTDGSMQRIAEALHQASGVAQQAMQVRRGAHDAHSAPAAPDDASRRTGV AMQEAAVATQPQSGHAWAEAYVEGLGWVGFDPFMNRCPDERYVRIAAGLDYRDAMPVYGPGAQPLGVEISVIQSPELV
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34789; Mature: 34789
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLAIRHISRFRFDEHAPHVLQRLRLRPQSGPSQTVRAWQVTIDGVEPTLTYADGLGNRV CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCHH DLVRHERDKPEFAIVAAGVVETQDRAGILGHIDAYAPPWIHERTTDLTRAGEAIRALAEA HHHHHCCCCCCEEEEEECCEECCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LPIEHKSLDALHWLMTEVHGRVAYEPRAQTAPRDAEAALRSGAGTSRDHAHVFVAAARAL CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH RIPARYVSGYLLTDGSMQRIAEALHQASGVAQQAMQVRRGAHDAHSAPAAPDDASRRTGV HCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC AMQEAAVATQPQSGHAWAEAYVEGLGWVGFDPFMNRCPDERYVRIAAGLDYRDAMPVYGP HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCHHCCCCCCCC GAQPLGVEISVIQSPELV CCCCCCEEEEEECCCCCC >Mature Secondary Structure MRLAIRHISRFRFDEHAPHVLQRLRLRPQSGPSQTVRAWQVTIDGVEPTLTYADGLGNRV CCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCHH DLVRHERDKPEFAIVAAGVVETQDRAGILGHIDAYAPPWIHERTTDLTRAGEAIRALAEA HHHHHCCCCCCEEEEEECCEECCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHH LPIEHKSLDALHWLMTEVHGRVAYEPRAQTAPRDAEAALRSGAGTSRDHAHVFVAAARAL CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH RIPARYVSGYLLTDGSMQRIAEALHQASGVAQQAMQVRRGAHDAHSAPAAPDDASRRTGV HCCHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCC AMQEAAVATQPQSGHAWAEAYVEGLGWVGFDPFMNRCPDERYVRIAAGLDYRDAMPVYGP HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCHHCCCCCCCC GAQPLGVEISVIQSPELV CCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA