Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is 126446086

Identifier: 126446086

GI number: 126446086

Start: 1978565

End: 1979506

Strand: Reverse

Name: 126446086

Synonym: BMA10247_A2040

Alternate gene names: NA

Gene position: 1979506-1978565 (Counterclockwise)

Preceding gene: 126446500

Following gene: 126446490

Centisome position: 84.14

GC content: 63.48

Gene sequence:

>942_bases
ATGCTTCTCGGACGCACAGCAAGCGGTCTTTACTGGATGTACCGCTATATCGAGCGCGCGGAAAACACCGCGCGCATCGT
CGACGCCGGATTGCGGATGGCGCTCACGCGCACGTCGGACGCGCCGGCGGAATGGTCGTCGGTGCTCGTCAGCTCGGGCG
CGGACGACGGCTATCGGCAGAAGTACGAAACATATGCGGCGGACACGGTCTCCGACTATCTGCTGCGCGATCGCGACAAC
CCGTCGAGCGTGCTGTCGTGCATCGAATGCGCGCGCTCGAATGCGCGGATGGTGCGCACCGCGCTCACGCGCGAGGCGTG
GGAGAGCGTGAACGGCGCGTGGCTCGCGATCCGGCGCGCGCTCGCGCAGCCGATCCGCGCGAGCGCGCTGCCGGCGATCC
TCGACGAGATCAAGCGCGAGACCGCGCTGATCCTCGGCAGCTTCTACAGCACGATGCTGCGCAACGAGATCTTCGATTTC
GCGCAGATCGGCGCGTTCGTCGAGCGTGCGGACAACACGGCGCGGATCCTCGACGTCAAATATCACCTGCTGCTGCCGTC
GGTGTCGCACGTCGGCACGATTCTCGACAACTACCAGTGGGAATCGATCCTGCGCTGCGTCGCCGCGCACCGTTCGTACC
GCTGGGTCTACGATGTCCAGTACAAGCCGATGAACATCGCCGACTATCTGATCCTCAACGGGCGCATGCCGCGCTCGCTG
CGCTACTGCTACGGGCGCGTCGTGTCGAGCCTCGAGCATCTCGCGAAGGATTACGGCGTCACGCACGGTTGTCACGAGAC
CGCCGCCAAAATCAAGCAGTCGCTCGAGGACAACACCGTCGAACGTGTCTTCAAGAGCGGGCTGCACGAGTTTCTGACGG
ATTTCATCGCCAAGAACAACAGTCTCGGCCTCGAAATCGCCCAAGCCTACAACTTCGATTGA

Upstream 100 bases:

>100_bases
GACTGAGCGCACGCGCACGGCGGCGCTCGCGCGAACGCGTGCATGCTCGCGACGCGTTCGCGCGCGCCGCACCGAACAAC
GATCGGAGTGGACGGCAAAC

Downstream 100 bases:

>100_bases
GGTCAGACATGCGCCTTGCCATCCGCCACATCTCGCGCTTCCGATTCGACGAACACGCGCCGCATGTGCTGCAGCGTCTG
CGGCTGCGGCCGCAAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQKYETYAADTVSDYLLRDRDN
PSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRALAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDF
AQIGAFVERADNTARILDVKYHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL
RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNNSLGLEIAQAYNFD

Sequences:

>Translated_313_residues
MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQKYETYAADTVSDYLLRDRDN
PSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRALAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDF
AQIGAFVERADNTARILDVKYHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL
RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNNSLGLEIAQAYNFD
>Mature_313_residues
MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQKYETYAADTVSDYLLRDRDN
PSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRALAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDF
AQIGAFVERADNTARILDVKYHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL
RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNNSLGLEIAQAYNFD

Specific function: Unknown

COG id: COG2307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35535; Mature: 35535

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHH
KYETYAADTVSDYLLRDRDNPSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH
LAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDFAQIGAFVERADNTARILDVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH
YHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHEECCCCCHHH
RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLGLEIAQAYNFD
CCCEEEHHHCCCC
>Mature Secondary Structure
MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHH
KYETYAADTVSDYLLRDRDNPSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH
LAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDFAQIGAFVERADNTARILDVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH
YHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL
HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHEECCCCCHHH
RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNN
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SLGLEIAQAYNFD
CCCEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA