Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126446086
Identifier: 126446086
GI number: 126446086
Start: 1978565
End: 1979506
Strand: Reverse
Name: 126446086
Synonym: BMA10247_A2040
Alternate gene names: NA
Gene position: 1979506-1978565 (Counterclockwise)
Preceding gene: 126446500
Following gene: 126446490
Centisome position: 84.14
GC content: 63.48
Gene sequence:
>942_bases ATGCTTCTCGGACGCACAGCAAGCGGTCTTTACTGGATGTACCGCTATATCGAGCGCGCGGAAAACACCGCGCGCATCGT CGACGCCGGATTGCGGATGGCGCTCACGCGCACGTCGGACGCGCCGGCGGAATGGTCGTCGGTGCTCGTCAGCTCGGGCG CGGACGACGGCTATCGGCAGAAGTACGAAACATATGCGGCGGACACGGTCTCCGACTATCTGCTGCGCGATCGCGACAAC CCGTCGAGCGTGCTGTCGTGCATCGAATGCGCGCGCTCGAATGCGCGGATGGTGCGCACCGCGCTCACGCGCGAGGCGTG GGAGAGCGTGAACGGCGCGTGGCTCGCGATCCGGCGCGCGCTCGCGCAGCCGATCCGCGCGAGCGCGCTGCCGGCGATCC TCGACGAGATCAAGCGCGAGACCGCGCTGATCCTCGGCAGCTTCTACAGCACGATGCTGCGCAACGAGATCTTCGATTTC GCGCAGATCGGCGCGTTCGTCGAGCGTGCGGACAACACGGCGCGGATCCTCGACGTCAAATATCACCTGCTGCTGCCGTC GGTGTCGCACGTCGGCACGATTCTCGACAACTACCAGTGGGAATCGATCCTGCGCTGCGTCGCCGCGCACCGTTCGTACC GCTGGGTCTACGATGTCCAGTACAAGCCGATGAACATCGCCGACTATCTGATCCTCAACGGGCGCATGCCGCGCTCGCTG CGCTACTGCTACGGGCGCGTCGTGTCGAGCCTCGAGCATCTCGCGAAGGATTACGGCGTCACGCACGGTTGTCACGAGAC CGCCGCCAAAATCAAGCAGTCGCTCGAGGACAACACCGTCGAACGTGTCTTCAAGAGCGGGCTGCACGAGTTTCTGACGG ATTTCATCGCCAAGAACAACAGTCTCGGCCTCGAAATCGCCCAAGCCTACAACTTCGATTGA
Upstream 100 bases:
>100_bases GACTGAGCGCACGCGCACGGCGGCGCTCGCGCGAACGCGTGCATGCTCGCGACGCGTTCGCGCGCGCCGCACCGAACAAC GATCGGAGTGGACGGCAAAC
Downstream 100 bases:
>100_bases GGTCAGACATGCGCCTTGCCATCCGCCACATCTCGCGCTTCCGATTCGACGAACACGCGCCGCATGTGCTGCAGCGTCTG CGGCTGCGGCCGCAAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQKYETYAADTVSDYLLRDRDN PSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRALAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDF AQIGAFVERADNTARILDVKYHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNNSLGLEIAQAYNFD
Sequences:
>Translated_313_residues MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQKYETYAADTVSDYLLRDRDN PSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRALAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDF AQIGAFVERADNTARILDVKYHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNNSLGLEIAQAYNFD >Mature_313_residues MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQKYETYAADTVSDYLLRDRDN PSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRALAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDF AQIGAFVERADNTARILDVKYHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNNSLGLEIAQAYNFD
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35535; Mature: 35535
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHH KYETYAADTVSDYLLRDRDNPSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH LAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDFAQIGAFVERADNTARILDVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH YHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHEECCCCCHHH RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNN HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLGLEIAQAYNFD CCCEEEHHHCCCC >Mature Secondary Structure MLLGRTASGLYWMYRYIERAENTARIVDAGLRMALTRTSDAPAEWSSVLVSSGADDGYRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHH KYETYAADTVSDYLLRDRDNPSSVLSCIECARSNARMVRTALTREAWESVNGAWLAIRRA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHH LAQPIRASALPAILDEIKRETALILGSFYSTMLRNEIFDFAQIGAFVERADNTARILDVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEH YHLLLPSVSHVGTILDNYQWESILRCVAAHRSYRWVYDVQYKPMNIADYLILNGRMPRSL HHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHEECCCCCHHH RYCYGRVVSSLEHLAKDYGVTHGCHETAAKIKQSLEDNTVERVFKSGLHEFLTDFIAKNN HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLGLEIAQAYNFD CCCEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA