| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446466
Identifier: 126446466
GI number: 126446466
Start: 2275958
End: 2277349
Strand: Direct
Name: 126446466
Synonym: BMA10247_A2344
Alternate gene names: NA
Gene position: 2275958-2277349 (Clockwise)
Preceding gene: 126447513
Following gene: 126447909
Centisome position: 96.74
GC content: 72.49
Gene sequence:
>1392_bases ATGACGAACCCGTTCGCCCAATGGTCGAGAGCAAGCGCGTGCGCGCTCGCCATCGCCTGCTTCGCGCCGTCCGGCGCCGC ATTCGCCGCGCAGGCCATAGCCGACGTTCCGACCGCCGGCGCGTCGATAGCTTCGGCCGCCTCGACGCCCGCGCCCGGCA CGCCGACGAGCGCCGCTGCGGCGGCCCGCTCGTTCGCCACGTCGCCCGCCGCGATCCACGGCGCCGTCGTCGACGCGCGA ACCGGCAAGCCGATCCCGGCCGCGATCGTGACGATCGGCGGCCGGCCGCTGCGCGCGGACGATCGGGGCACATTCTCGGC CGACGCCGCGGCCGCCGACATCGCCGTGCGCGCGCCCGGCTATCTGGCGACGCGCGCGCGCGCCGAAGCCGGCCGGCCCG TCACCGTCGCGCTCGCGCCGTTCCGGCCCAAAGCCGTCTATCTGTCCGTGTTCGGCATCACGAGCAAGACGCTGCGCGAA GCCGCGGTGGATCTCAAGGGCGCGACCGCGATCAACGCGCTCGTCGTCGACATGAAGGGCGACCGCGGCATCACGCCGTA CCCGAGCGCGGCGCGGCGCGCGTCGGGCGCGGCCGCGCGGACGCCGAACGCCCCCGTCATGCGCGACTTCGCGGCGCTCG TCGCCGATCTGCACCGGCGCGGGCTGTATCTGATCGCGCGAATCGTCGTGTTCAAGGACGATCCGCTCGCCGCCGCACAC CCGGAGTGGACGGTGCGCGACGCGGACGGCAACATCTGGCGCGACCGCGAAAAGCTGCGCTGGATCGATCCGTCGCTGCG CGAGACGTGGGCGCACAATCTCGACGTCGCCGAGGAGGCGGCGAAGCTCGGCTTCGACGAAATCCAGTTCGACTACGTGC GCTTTCCGGACGCGCGCGAGCTGCGCTTCAGCGTGCCGAACACGCGCGCGAACCGCACCGCGGCGATCGCGGGCTTCCTG CGGGCGGCGCGCGAGCGGCTTGCGCCGTACAACGTGTTCGTCGCCGCCGACATCTTCGGCTACGTCTGCTGGAACGAGGA CGACACCGCGATCGGCCAGCAGATCGAGACGCTCGGCGGGCCGCTCGACTACATCTCGCCGATGCTCTACCCGTCCGGCT TCACGTGGGGCTTGCCGGGCTGCACGCAGCCGACCGCCGATCCCGGGCAGATCGTACGCCGCTCGCTCGTCGAGGCGCGC TCGCGCACCGGCCTGCCCGGCGTGCGGTTCCGGCCGTGGCTGCAGGCGTTTCGCGACTATGCGTTCGATCACCGCGATTT CGCGGCGGCGGAGATCCGCGCGCAGGTGGACGCCGCCGAGGCCGCCGACACCGACGGATGGATGCTGTGGAACGCGCGCA ATCGCTACGATCCGCGGCAGTTGCCGAAGTAG
Upstream 100 bases:
>100_bases GCCGTTCGCCGCGCGCCGGCCGCGCGGTGGCCGCGCATTCGACGGCTGCCGCCGCGACGCCCGCGAATGCGTTCGCCGCC CCGCCCACGGAGAAAGATCG
Downstream 100 bases:
>100_bases CCGCGCGAATGGGGCCGGGCGACGTCATGCGCGGCGCCGGACGAGCGCGGCCTCGTGCCGGCGCGAGGCTGCGTTGCACG CGGCGAAGCGGGTCGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTNPFAQWSRASACALAIACFAPSGAAFAAQAIADVPTAGASIASAASTPAPGTPTSAAAAARSFATSPAAIHGAVVDAR TGKPIPAAIVTIGGRPLRADDRGTFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLRE AAVDLKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNAPVMRDFAALVADLHRRGLYLIARIVVFKDDPLAAAH PEWTVRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFL RAARERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEAR SRTGLPGVRFRPWLQAFRDYAFDHRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK
Sequences:
>Translated_463_residues MTNPFAQWSRASACALAIACFAPSGAAFAAQAIADVPTAGASIASAASTPAPGTPTSAAAAARSFATSPAAIHGAVVDAR TGKPIPAAIVTIGGRPLRADDRGTFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLRE AAVDLKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNAPVMRDFAALVADLHRRGLYLIARIVVFKDDPLAAAH PEWTVRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFL RAARERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEAR SRTGLPGVRFRPWLQAFRDYAFDHRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK >Mature_462_residues TNPFAQWSRASACALAIACFAPSGAAFAAQAIADVPTAGASIASAASTPAPGTPTSAAAAARSFATSPAAIHGAVVDART GKPIPAAIVTIGGRPLRADDRGTFSADAAAADIAVRAPGYLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLREA AVDLKGATAINALVVDMKGDRGITPYPSAARRASGAAARTPNAPVMRDFAALVADLHRRGLYLIARIVVFKDDPLAAAHP EWTVRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARELRFSVPNTRANRTAAIAGFLR AARERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGGPLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEARS RTGLPGVRFRPWLQAFRDYAFDHRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK
Specific function: Unknown
COG id: COG1306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49701; Mature: 49569
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPFAQWSRASACALAIACFAPSGAAFAAQAIADVPTAGASIASAASTPAPGTPTSAAA CCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHH AARSFATSPAAIHGAVVDARTGKPIPAAIVTIGGRPLRADDRGTFSADAAAADIAVRAPG HHHHHCCCCHHHHEEEEECCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHHEEEEECCC YLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLREAAVDLKGATAINALVVDMKG HHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEEECC DRGITPYPSAARRASGAAARTPNAPVMRDFAALVADLHRRGLYLIARIVVFKDDPLAAAH CCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC PEWTVRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARE CCCEEECCCCCEECCHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCHHEEEEEEECCCCCC LRFSVPNTRANRTAAIAGFLRAARERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGG EEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHCC PLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEARSRTGLPGVRFRPWLQAFRDY CHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AFDHRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCC >Mature Secondary Structure TNPFAQWSRASACALAIACFAPSGAAFAAQAIADVPTAGASIASAASTPAPGTPTSAAA CCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHH AARSFATSPAAIHGAVVDARTGKPIPAAIVTIGGRPLRADDRGTFSADAAAADIAVRAPG HHHHHCCCCHHHHEEEEECCCCCCCCEEEEEECCEEECCCCCCCCCCCCHHHEEEEECCC YLATRARAEAGRPVTVALAPFRPKAVYLSVFGITSKTLREAAVDLKGATAINALVVDMKG HHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEEEEEEECC DRGITPYPSAARRASGAAARTPNAPVMRDFAALVADLHRRGLYLIARIVVFKDDPLAAAH CCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCC PEWTVRDADGNIWRDREKLRWIDPSLRETWAHNLDVAEEAAKLGFDEIQFDYVRFPDARE CCCEEECCCCCEECCHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCHHEEEEEEECCCCCC LRFSVPNTRANRTAAIAGFLRAARERLAPYNVFVAADIFGYVCWNEDDTAIGQQIETLGG EEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHCC PLDYISPMLYPSGFTWGLPGCTQPTADPGQIVRRSLVEARSRTGLPGVRFRPWLQAFRDY CHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AFDHRDFAAAEIRAQVDAAEAADTDGWMLWNARNRYDPRQLPK CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA