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The map label for this gene is ygbL [H]

Identifier: 126446351

GI number: 126446351

Start: 1789557

End: 1790198

Strand: Direct

Name: ygbL [H]

Synonym: BMA10247_A1859

Alternate gene names: 126446351

Gene position: 1789557-1790198 (Clockwise)

Preceding gene: 126446249

Following gene: 126447030

Centisome position: 76.06

GC content: 71.81

Gene sequence:

>642_bases
ATGAGCCCCATCGAGACGAAACTGCGCGAGGAGATCTGCGAGATCGGCGCGAGCCTGTACGCGCGCGGCCACGCGGTCGG
CAGCGCGGGCAACATCAGCGCGAAGCTCGACGACGGCTGGCTGATCACGCCGACCGACGCATGCCTCGGCCGCCTCGATC
CGGCCGGCATCGCGAAGGTCGATCCGGCGGGCAACGCGGTGTCGGGCGGCAAGCCGTCGAAGACGCTCGCGCTGCATCGC
GGGATCTACGCGCGCAACGCCGAAGCGCGCGGCATCGTCCACACGCATTCGACGCACCTCGTCGCGCTCACGCTCGCGGG
CGTCTGGAGCGAGGCCGACGTGCTGCCGCCGATCACGCCGTACTACGTGATGAAGGTCGGCCATATTCCGCTCATCCGCT
ATCGCCGGCCGGGCGACCCGGCGGTGGCCGCCGAAGTCGCGGCGCTCGCCGATCGCGTGCGCGGCGTGCTGCTCGAGCGG
CTCGGCCCGGTGGTCTGGGGCCCGTCGGTCGCGCATGCGTCGTACGCGCTCGAGGAGCTCGAGGAAACCGCGCGCCTGTG
GCTGATCACGCACCCGAAACCCGAGCCGCTCGGCGAGCCCGCGCTGGCCGAATTGCGCGACGCGTTCGGCGCGCGCTGGT
AA

Upstream 100 bases:

>100_bases
GGACGCCCGACGCGCAGCCGCTCGGCCTCGCGCTGAAGTCCGGCAATTTCGGCTCGGTCGACTTCTTCGAGAAGGCGCTG
CGCGCGCTGGAGGGCGCCGC

Downstream 100 bases:

>100_bases
CGCAGTCCTGCCCGCCGTGTGCGCGGGCCCTCTCACCAGCACACGACAAAGCGCACGGCCGCGCGCAAGCGGCCGGCGTC
GACAACTCATGGAGACAGCG

Product: putative aldolase

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSPIETKLREEICEIGASLYARGHAVGSAGNISAKLDDGWLITPTDACLGRLDPAGIAKVDPAGNAVSGGKPSKTLALHR
GIYARNAEARGIVHTHSTHLVALTLAGVWSEADVLPPITPYYVMKVGHIPLIRYRRPGDPAVAAEVAALADRVRGVLLER
LGPVVWGPSVAHASYALEELEETARLWLITHPKPEPLGEPALAELRDAFGARW

Sequences:

>Translated_213_residues
MSPIETKLREEICEIGASLYARGHAVGSAGNISAKLDDGWLITPTDACLGRLDPAGIAKVDPAGNAVSGGKPSKTLALHR
GIYARNAEARGIVHTHSTHLVALTLAGVWSEADVLPPITPYYVMKVGHIPLIRYRRPGDPAVAAEVAALADRVRGVLLER
LGPVVWGPSVAHASYALEELEETARLWLITHPKPEPLGEPALAELRDAFGARW
>Mature_212_residues
SPIETKLREEICEIGASLYARGHAVGSAGNISAKLDDGWLITPTDACLGRLDPAGIAKVDPAGNAVSGGKPSKTLALHRG
IYARNAEARGIVHTHSTHLVALTLAGVWSEADVLPPITPYYVMKVGHIPLIRYRRPGDPAVAAEVAALADRVRGVLLERL
GPVVWGPSVAHASYALEELEETARLWLITHPKPEPLGEPALAELRDAFGARW

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=208, Percent_Identity=43.75, Blast_Score=167, Evalue=4e-43,
Organism=Escherichia coli, GI1789164, Length=201, Percent_Identity=26.3681592039801, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 4.1.2.17

Molecular weight: Translated: 22733; Mature: 22602

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIETKLREEICEIGASLYARGHAVGSAGNISAKLDDGWLITPTDACLGRLDPAGIAKV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEECCHHHHHHCCCCCCCEEE
DPAGNAVSGGKPSKTLALHRGIYARNAEARGIVHTHSTHLVALTLAGVWSEADVLPPITP
CCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCEEEECCCEEEEEEEHHCCCCCCCCCCCCH
YYVMKVGHIPLIRYRRPGDPAVAAEVAALADRVRGVLLERLGPVVWGPSVAHASYALEEL
HHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
EETARLWLITHPKPEPLGEPALAELRDAFGARW
HHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPIETKLREEICEIGASLYARGHAVGSAGNISAKLDDGWLITPTDACLGRLDPAGIAKV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEECCHHHHHHCCCCCCCEEE
DPAGNAVSGGKPSKTLALHRGIYARNAEARGIVHTHSTHLVALTLAGVWSEADVLPPITP
CCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCEEEECCCEEEEEEEHHCCCCCCCCCCCCH
YYVMKVGHIPLIRYRRPGDPAVAAEVAALADRVRGVLLERLGPVVWGPSVAHASYALEEL
HHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
EETARLWLITHPKPEPLGEPALAELRDAFGARW
HHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240; 9278503 [H]