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The map label for this gene is ygbK [C]

Identifier: 126446249

GI number: 126446249

Start: 1788169

End: 1789560

Strand: Direct

Name: ygbK [C]

Synonym: BMA10247_A1858

Alternate gene names: 126446249

Gene position: 1788169-1789560 (Clockwise)

Preceding gene: 126445751

Following gene: 126446351

Centisome position: 76.01

GC content: 71.98

Gene sequence:

>1392_bases
ATGAGCACCGATCAAGCCCTTCGCCCCCTGCTCGGCTGCATCGCCGACGATTTCACCGGCGCGACCGATCTCGCGAACAT
GCTGGTCAAGAGCGGCATGCGCACCGTGCAGACGATCGGCGTGCCCGCCGCCGGCGCGGCCGTGCCAGCCGATGCGATCG
TCGTCGCGCTGAAGTCGCGCACGATCCCGGCCGCCGACGCGGTCGCGCAATCGCTCGCCGCGCTCGACTGGCTGCGCGCG
CAGGGCTGCCGCCAGTTCTTCTTCAAATACTGCTCGACGTTCGATTCGACCGACGCGGGCAACATCGGCCCCGTCGCCGA
TGCGCTGCTCGACGCGCTCGGCGGCGAGCGCGCGTTCACGATCGCGTGCCCCGCGTTCCCCGAGAACGGCCGAACCGTCT
ATCGCGGCCACCTGTTCGTCGGCGACGCGCTGCTCGGCGAATCCGGGATGGAGAATCATCCGCTCACGCCGATGAAGGAC
GCGAATCTCGTGCGCGTGCTGCAGCGGCAAACGCCGTCGAAAGTCGGGCTGATCCGCCACGACGCGATCGCGCTCGGCAC
CTGCGCCGTGCGCGAGACGATCGACACGCTGCGCCGCGAGGGCGTCCGCATCGCGATCGCGGACGCGCTGACCGACCGCG
ATCTGTACGTGCTCGGCGAGGCATGCGCGGACTTGCCGCTGATCACGGGCGGCTCGGGCGTCGCGCTCGGGCTGCCGTCG
AATTTCCGGCTCGGCGGGCTGTTGCCCGAGCGCGGCGACGCGGCGGCGTTGCCCGCGATCGGCGGCGCGTCGGCGGTGCT
CGCCGGCAGCGCATCGAAGGCGACCCACGCGCAGGTCGCCGCATGGCGCGCCGAGCGCCCCGCGTTGCGCATCGATCCGT
TCGCGGCCGCGCGCGGCGAGCCCGTCGTCGACCAGGCGCTCGCGTTCGCGCGCGCGCATCTGCCGCAGCCGGTGCTGATC
TACGCGAGCGCCGCGCCCGACGAAGTGAAGCAGGTGCAGCAGGCGCTCGGCATCGAAGCCGCCGGCCATCTCGTCGAGGC
GACGCTCGCCGCGATCGCGCGCGGGCTGCGCGAGATGGGCGTGCGCAAGTTCGTCGTCGCGGGCGGCGAAACTTCCGGCG
CGGTCGTGCAGGCGCTCGGCGTGAAAGCGCTGCGGATCGGCGCGCAGATCGACCCCGGCGTGCCCGCCACCGCGACGACC
GAAGGAAGTCCCTGTGGGACGACCGAAGGAAGTCCCTGTGGGACGACCGAAGGAAGTCCCTGTGGGACGACCGAAGGAAG
CCCCCGCGGGACGCCCGACGCGCAGCCGCTCGGCCTCGCGCTGAAGTCCGGCAATTTCGGCTCGGTCGACTTCTTCGAGA
AGGCGCTGCGCGCGCTGGAGGGCGCCGCATGA

Upstream 100 bases:

>100_bases
AGCGCGGGCCACGGCGGCGAGGACGACTCGGCCGTCATCAAGACGTTCCCCGGCATCGCGCTGCCGGCGCGCCGCTGATT
CACCGGAGTTGCCTGCCTCC

Downstream 100 bases:

>100_bases
GCCCCATCGAGACGAAACTGCGCGAGGAGATCTGCGAGATCGGCGCGAGCCTGTACGCGCGCGGCCACGCGGTCGGCAGC
GCGGGCAACATCAGCGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MSTDQALRPLLGCIADDFTGATDLANMLVKSGMRTVQTIGVPAAGAAVPADAIVVALKSRTIPAADAVAQSLAALDWLRA
QGCRQFFFKYCSTFDSTDAGNIGPVADALLDALGGERAFTIACPAFPENGRTVYRGHLFVGDALLGESGMENHPLTPMKD
ANLVRVLQRQTPSKVGLIRHDAIALGTCAVRETIDTLRREGVRIAIADALTDRDLYVLGEACADLPLITGGSGVALGLPS
NFRLGGLLPERGDAAALPAIGGASAVLAGSASKATHAQVAAWRAERPALRIDPFAAARGEPVVDQALAFARAHLPQPVLI
YASAAPDEVKQVQQALGIEAAGHLVEATLAAIARGLREMGVRKFVVAGGETSGAVVQALGVKALRIGAQIDPGVPATATT
EGSPCGTTEGSPCGTTEGSPCGTTEGSPRGTPDAQPLGLALKSGNFGSVDFFEKALRALEGAA

Sequences:

>Translated_463_residues
MSTDQALRPLLGCIADDFTGATDLANMLVKSGMRTVQTIGVPAAGAAVPADAIVVALKSRTIPAADAVAQSLAALDWLRA
QGCRQFFFKYCSTFDSTDAGNIGPVADALLDALGGERAFTIACPAFPENGRTVYRGHLFVGDALLGESGMENHPLTPMKD
ANLVRVLQRQTPSKVGLIRHDAIALGTCAVRETIDTLRREGVRIAIADALTDRDLYVLGEACADLPLITGGSGVALGLPS
NFRLGGLLPERGDAAALPAIGGASAVLAGSASKATHAQVAAWRAERPALRIDPFAAARGEPVVDQALAFARAHLPQPVLI
YASAAPDEVKQVQQALGIEAAGHLVEATLAAIARGLREMGVRKFVVAGGETSGAVVQALGVKALRIGAQIDPGVPATATT
EGSPCGTTEGSPCGTTEGSPCGTTEGSPRGTPDAQPLGLALKSGNFGSVDFFEKALRALEGAA
>Mature_462_residues
STDQALRPLLGCIADDFTGATDLANMLVKSGMRTVQTIGVPAAGAAVPADAIVVALKSRTIPAADAVAQSLAALDWLRAQ
GCRQFFFKYCSTFDSTDAGNIGPVADALLDALGGERAFTIACPAFPENGRTVYRGHLFVGDALLGESGMENHPLTPMKDA
NLVRVLQRQTPSKVGLIRHDAIALGTCAVRETIDTLRREGVRIAIADALTDRDLYVLGEACADLPLITGGSGVALGLPSN
FRLGGLLPERGDAAALPAIGGASAVLAGSASKATHAQVAAWRAERPALRIDPFAAARGEPVVDQALAFARAHLPQPVLIY
ASAAPDEVKQVQQALGIEAAGHLVEATLAAIARGLREMGVRKFVVAGGETSGAVVQALGVKALRIGAQIDPGVPATATTE
GSPCGTTEGSPCGTTEGSPCGTTEGSPRGTPDAQPLGLALKSGNFGSVDFFEKALRALEGAA

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=388, Percent_Identity=45.360824742268, Blast_Score=316, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 47368; Mature: 47237

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDQALRPLLGCIADDFTGATDLANMLVKSGMRTVQTIGVPAAGAAVPADAIVVALKSR
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHEEEEECCC
TIPAADAVAQSLAALDWLRAQGCRQFFFKYCSTFDSTDAGNIGPVADALLDALGGERAFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEE
IACPAFPENGRTVYRGHLFVGDALLGESGMENHPLTPMKDANLVRVLQRQTPSKVGLIRH
EECCCCCCCCCEEEEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCEEEC
DAIALGTCAVRETIDTLRREGVRIAIADALTDRDLYVLGEACADLPLITGGSGVALGLPS
CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHHCCCEEECCCEEEEECCC
NFRLGGLLPERGDAAALPAIGGASAVLAGSASKATHAQVAAWRAERPALRIDPFAAARGE
CCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHCCCCCEEECCHHCCCCC
PVVDQALAFARAHLPQPVLIYASAAPDEVKQVQQALGIEAAGHLVEATLAAIARGLREMG
CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
VRKFVVAGGETSGAVVQALGVKALRIGAQIDPGVPATATTEGSPCGTTEGSPCGTTEGSP
CEEEEEECCCCCCHHHHHHCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGTTEGSPRGTPDAQPLGLALKSGNFGSVDFFEKALRALEGAA
CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STDQALRPLLGCIADDFTGATDLANMLVKSGMRTVQTIGVPAAGAAVPADAIVVALKSR
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHEEEEECCC
TIPAADAVAQSLAALDWLRAQGCRQFFFKYCSTFDSTDAGNIGPVADALLDALGGERAFT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEE
IACPAFPENGRTVYRGHLFVGDALLGESGMENHPLTPMKDANLVRVLQRQTPSKVGLIRH
EECCCCCCCCCEEEEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCEEEC
DAIALGTCAVRETIDTLRREGVRIAIADALTDRDLYVLGEACADLPLITGGSGVALGLPS
CHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEHHHHCCCEEECCCEEEEECCC
NFRLGGLLPERGDAAALPAIGGASAVLAGSASKATHAQVAAWRAERPALRIDPFAAARGE
CCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHCCCCCEEECCHHCCCCC
PVVDQALAFARAHLPQPVLIYASAAPDEVKQVQQALGIEAAGHLVEATLAAIARGLREMG
CHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
VRKFVVAGGETSGAVVQALGVKALRIGAQIDPGVPATATTEGSPCGTTEGSPCGTTEGSP
CEEEEEECCCCCCHHHHHHCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGTTEGSPRGTPDAQPLGLALKSGNFGSVDFFEKALRALEGAA
CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]