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The map label for this gene is yphA [H]

Identifier: 126446187

GI number: 126446187

Start: 1026973

End: 1027386

Strand: Direct

Name: yphA [H]

Synonym: BMA10247_A1085

Alternate gene names: 126446187

Gene position: 1026973-1027386 (Clockwise)

Preceding gene: 126447045

Following gene: 126446819

Centisome position: 43.65

GC content: 63.29

Gene sequence:

>414_bases
ATGAAACAGACTTTCCTTGCGCCTCAAAAAGACCTTCTGCTGCTGCTGTCCCGCATCCTGCTCGTCATCCTGTTCGTGAT
CTTCGGCTGGGAGAAGCTGCTGAATTTCTCGGGCACGGCCCAGTTCATGGCCGCCGAGGGCACGCCGCTGCCCTCGATCG
CGGCGGTCGTCGCCGTCGCGATGGAGTTCTTCGTCGGCATCGCGCTCCTGCTCGGCTTCTGCACGCGGCCGATCGCGCTG
CTGCTCGGCCTCTACACGCTCGGCACCGCGTTCATCGGCCATCACTACTGGTCGATGCCCGCCGCCGAGCAGATGAACAT
GATGATCCATTTCTACAAGAACATCGCGATCACGGGCGGCTTGCTCGCCCTGTGCGCGGCTGGCCCCGGACGCTATTCGC
TCGATCGCGGCTGA

Upstream 100 bases:

>100_bases
ACCGCGCGCGATGTGCGGCGCGCGCCGTCTCGGTTCGCAACCGGCACGTGCGCGATGCGTCGTTGCACCGCGCGGTGCCC
GCTTCCGGCTTCAAACGACA

Downstream 100 bases:

>100_bases
GCGGCGCGCCGGACGTGTTTTGAACCTGAGAGAAGACAACAGGCGGAGAACAATGGGTTTTCAATCGAGGAAAATGATGG
TCGCGCTCGTCGCGGCCGGG

Product: DoxX family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKQTFLAPQKDLLLLLSRILLVILFVIFGWEKLLNFSGTAQFMAAEGTPLPSIAAVVAVAMEFFVGIALLLGFCTRPIAL
LLGLYTLGTAFIGHHYWSMPAAEQMNMMIHFYKNIAITGGLLALCAAGPGRYSLDRG

Sequences:

>Translated_137_residues
MKQTFLAPQKDLLLLLSRILLVILFVIFGWEKLLNFSGTAQFMAAEGTPLPSIAAVVAVAMEFFVGIALLLGFCTRPIAL
LLGLYTLGTAFIGHHYWSMPAAEQMNMMIHFYKNIAITGGLLALCAAGPGRYSLDRG
>Mature_137_residues
MKQTFLAPQKDLLLLLSRILLVILFVIFGWEKLLNFSGTAQFMAAEGTPLPSIAAVVAVAMEFFVGIALLLGFCTRPIAL
LLGLYTLGTAFIGHHYWSMPAAEQMNMMIHFYKNIAITGGLLALCAAGPGRYSLDRG

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=127, Percent_Identity=50.3937007874016, Blast_Score=133, Evalue=5e-33,
Organism=Escherichia coli, GI87082210, Length=130, Percent_Identity=42.3076923076923, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14908; Mature: 14908

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQTFLAPQKDLLLLLSRILLVILFVIFGWEKLLNFSGTAQFMAAEGTPLPSIAAVVAVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCHHHHHHHHHH
MEFFVGIALLLGFCTRPIALLLGLYTLGTAFIGHHYWSMPAAEQMNMMIHFYKNIAITGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLALCAAGPGRYSLDRG
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKQTFLAPQKDLLLLLSRILLVILFVIFGWEKLLNFSGTAQFMAAEGTPLPSIAAVVAVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCHHHHHHHHHH
MEFFVGIALLLGFCTRPIALLLGLYTLGTAFIGHHYWSMPAAEQMNMMIHFYKNIAITGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LLALCAAGPGRYSLDRG
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]