Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

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The map label for this gene is omp32 [H]

Identifier: 126446819

GI number: 126446819

Start: 1027439

End: 1028554

Strand: Direct

Name: omp32 [H]

Synonym: BMA10247_A1086

Alternate gene names: 126446819

Gene position: 1027439-1028554 (Clockwise)

Preceding gene: 126446187

Following gene: 126445776

Centisome position: 43.67

GC content: 66.13

Gene sequence:

>1116_bases
ATGGGTTTTCAATCGAGGAAAATGATGGTCGCGCTCGTCGCGGCCGGGCCGGCGCTCGCTTGCGCGCAGACGAGCGTCAC
GCTGTACGGCCGCGTCGATGGCGGCGTCGAATATCTGAATCACATCGCGAAGCCGTCGGGCGGCAGCGCGTCGCGCTGGA
GCGCCGAGAGCGGCGACTGGGGCACGAGCATGTTCGGCCTGAAGGGCGCCGAGGATCTGGGCGGCCGCACGTCGGCGATC
TTCAATCTGGAAACCGCGTTCCAGGTGATGAACGGCACCACGGGCGGCGGCCGGATGTGGTCGCGGCGCGCGTACGTCGG
CTTGAAGAACGACACGTGGGGCACGCTGCAGGCGGGCCGAAACCTCTTCATCGACAGCGACGGCGTGTGGGAATTCGATC
CGTTCGTCCAGCAGGCGTTCTCGTCGGCGTCGCTCGTGCGCGGGCGCAACTGGCAGCAGACGAGCAACAACGTCGAGTAT
CACAGCCCGGTGTTCGGCGGCTTCGACGTGCAGGCGCAGTACGCGTTCGGCAATCAGTCGCGCGGCTTCAACTACGGCGC
GCAGGGCGACTTCGGCCGCTCGGAGGGCGTGATGGTCTCGTATCACTCGCCGCTGCTCGACGTGCGCGGCATCTATGACG
AACTGCGCGACAGCAACGGCCGGATGAGCAACATCTTCTCCAGCTCGCGCGAGTATTTCATCGGCGCGAACGTGAAGGTG
CAGAAATTCAAGATCCAGGGGGCGTACACGCATTACTCGGCGCCCGATACGCCGGCGGGCCTCGCGGACCGCGCCGATCA
CTTCTGGCTCGGCGCGACCTATCAGGCAGACCCGCAATGGGCGGTGACGGGCGGCGGCTACTATGTGCGCGTGCGCGGCG
GCGACGGCGGCGACGCGTCGCACGATCCGTCCGGCCACGCGATCATGTATGCGCTCGGGACCACTTACAATCTGTCGAAG
CGCACGTTCCTCTACGGCACGCTCGCCTACGTGCGCAACGGCGGGAATTCGAATTTCTCGCTGCTCGCGACGCCGCGCGA
CGCGACGCCGAACACGAGCCCGCTCGCCGGAGAATCGCAAACGGGCGCGTATGTCGGGATGATGCATACGTTCTGA

Upstream 100 bases:

>100_bases
GCCCTGTGCGCGGCTGGCCCCGGACGCTATTCGCTCGATCGCGGCTGAGCGGCGCGCCGGACGTGTTTTGAACCTGAGAG
AAGACAACAGGCGGAGAACA

Downstream 100 bases:

>100_bases
CGCGCGAAGCGCGCGAGGCGGGAAAGCAAGGGCTTCGGCGTGTCGGCCGAAGCTTTTTTTCACCTTCCGCATTGCCGCGC
CTGCGCGCGAACGGGCCCGC

Product: putative outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MGFQSRKMMVALVAAGPALACAQTSVTLYGRVDGGVEYLNHIAKPSGGSASRWSAESGDWGTSMFGLKGAEDLGGRTSAI
FNLETAFQVMNGTTGGGRMWSRRAYVGLKNDTWGTLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNVEY
HSPVFGGFDVQAQYAFGNQSRGFNYGAQGDFGRSEGVMVSYHSPLLDVRGIYDELRDSNGRMSNIFSSSREYFIGANVKV
QKFKIQGAYTHYSAPDTPAGLADRADHFWLGATYQADPQWAVTGGGYYVRVRGGDGGDASHDPSGHAIMYALGTTYNLSK
RTFLYGTLAYVRNGGNSNFSLLATPRDATPNTSPLAGESQTGAYVGMMHTF

Sequences:

>Translated_371_residues
MGFQSRKMMVALVAAGPALACAQTSVTLYGRVDGGVEYLNHIAKPSGGSASRWSAESGDWGTSMFGLKGAEDLGGRTSAI
FNLETAFQVMNGTTGGGRMWSRRAYVGLKNDTWGTLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNVEY
HSPVFGGFDVQAQYAFGNQSRGFNYGAQGDFGRSEGVMVSYHSPLLDVRGIYDELRDSNGRMSNIFSSSREYFIGANVKV
QKFKIQGAYTHYSAPDTPAGLADRADHFWLGATYQADPQWAVTGGGYYVRVRGGDGGDASHDPSGHAIMYALGTTYNLSK
RTFLYGTLAYVRNGGNSNFSLLATPRDATPNTSPLAGESQTGAYVGMMHTF
>Mature_370_residues
GFQSRKMMVALVAAGPALACAQTSVTLYGRVDGGVEYLNHIAKPSGGSASRWSAESGDWGTSMFGLKGAEDLGGRTSAIF
NLETAFQVMNGTTGGGRMWSRRAYVGLKNDTWGTLQAGRNLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNVEYH
SPVFGGFDVQAQYAFGNQSRGFNYGAQGDFGRSEGVMVSYHSPLLDVRGIYDELRDSNGRMSNIFSSSREYFIGANVKVQ
KFKIQGAYTHYSAPDTPAGLADRADHFWLGATYQADPQWAVTGGGYYVRVRGGDGGDASHDPSGHAIMYALGTTYNLSKR
TFLYGTLAYVRNGGNSNFSLLATPRDATPNTSPLAGESQTGAYVGMMHTF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40103; Mature: 39972

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFQSRKMMVALVAAGPALACAQTSVTLYGRVDGGVEYLNHIAKPSGGSASRWSAESGDW
CCCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GTSMFGLKGAEDLGGRTSAIFNLETAFQVMNGTTGGGRMWSRRAYVGLKNDTWGTLQAGR
CCEECCCCCCHHCCCCEEEEEEHHHHHHHHCCCCCCCCEECCEEEEEECCCCCEEHHCCC
NLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNVEYHSPVFGGFDVQAQYAFGNQS
EEEECCCCCEECCHHHHHHHCCHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCC
RGFNYGAQGDFGRSEGVMVSYHSPLLDVRGIYDELRDSNGRMSNIFSSSREYFIGANVKV
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCEEE
QKFKIQGAYTHYSAPDTPAGLADRADHFWLGATYQADPQWAVTGGGYYVRVRGGDGGDAS
EEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCEEEEEEECCCCCCCC
HDPSGHAIMYALGTTYNLSKRTFLYGTLAYVRNGGNSNFSLLATPRDATPNTSPLAGESQ
CCCCCCEEEEEECCEEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC
TGAYVGMMHTF
CCEEEEEEECC
>Mature Secondary Structure 
GFQSRKMMVALVAAGPALACAQTSVTLYGRVDGGVEYLNHIAKPSGGSASRWSAESGDW
CCCCCEEEEEEEECCCCEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCC
GTSMFGLKGAEDLGGRTSAIFNLETAFQVMNGTTGGGRMWSRRAYVGLKNDTWGTLQAGR
CCEECCCCCCHHCCCCEEEEEEHHHHHHHHCCCCCCCCEECCEEEEEECCCCCEEHHCCC
NLFIDSDGVWEFDPFVQQAFSSASLVRGRNWQQTSNNVEYHSPVFGGFDVQAQYAFGNQS
EEEECCCCCEECCHHHHHHHCCHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEEECCCC
RGFNYGAQGDFGRSEGVMVSYHSPLLDVRGIYDELRDSNGRMSNIFSSSREYFIGANVKV
CCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCEEE
QKFKIQGAYTHYSAPDTPAGLADRADHFWLGATYQADPQWAVTGGGYYVRVRGGDGGDAS
EEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCEEEEEEECCCCCCCC
HDPSGHAIMYALGTTYNLSKRTFLYGTLAYVRNGGNSNFSLLATPRDATPNTSPLAGESQ
CCCCCCEEEEEECCEEECCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCC
TGAYVGMMHTF
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]