Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is 126446123
Identifier: 126446123
GI number: 126446123
Start: 1123599
End: 1124507
Strand: Reverse
Name: 126446123
Synonym: BMA10247_A1148
Alternate gene names: NA
Gene position: 1124507-1123599 (Counterclockwise)
Preceding gene: 126446757
Following gene: 126447835
Centisome position: 47.8
GC content: 72.5
Gene sequence:
>909_bases GTGCGGCCTTTCATCAGATCATTCGTGGTTCTATTCATGTCCGGCAACACCTTCTGGCTCGCGGCTCCGTGGGCCGCCCT CTTCGTCGCCGCGCTCGCGGCCGTCTGGTTTCCGAAGCTGCGCGCGGCAAGCGTCGGCCTCGGCGCGCTCGGCTACGCGG GCGCGTTCGCGAGCGGCCTGATCGCGCCCGTCGCGCTCGCGCCGATCGCGCTTCTCGCCGCCGCCGCGTACGCGGTCGCG CCGCGGCGCCATGCGGCCGTTCGCGTCGCCGGGCACGCGGTGTTCGTCGCACTCGCGCTCGCGCTGATGCTCCACTGGCT GCCCGGCTTCCACAACCCGCGCGTGATCGGCCCCGTGCGCTTCACGCCCGACGCCGCGCCGTTCACGATGTATCTGAATC TCGACAAGCCGCTCGTCGGCTTCTGGCTGCTGTGGGTGCTGCCGTGGCTGCGGCCGATCGACGATCGCGCGCGCGCATGG CGCGCGGGCATCGTCGCGGCGGCCGCGACGTCCGCGGTGTGCCTCGTGTTCGCGCTCGGCGTCGGCCTCGTCGGCTGGGC GCCGAAGTGGCCCGAATCCGCATGGCTGTGGCTCGCGAACAATCTGCTGTTCGTCTGCTTCGCCGAGGAAGCGCTGTTCC GCGGCTATCTGCAAGGCGGGCTGAGCCGACTGCTCGCGAACCGCGTGCCGGCCGCGGGCACGGTCGCGCTCGTCGCGGCC GCGCTGCTGTTCGGCGCCGCGCACGCCGCGGGCGGCTGGCAATGGGTCGCGCTCGCCACCGTCGCGGGCGTCGGCTACGG GCTCGCTTATCGCGCAGGCGGGTTGCAGGCGGCCGTGCTCGCGCACGTCGGCCTGAATCTCGCGCATTTCGGGCTCTTCA CGTATCCGATGCTCGCGGTGGCCCGCTGA
Upstream 100 bases:
>100_bases CGCCCGGGCCCCGCACGGGCGGCATGAGCGCCGTCCGACGCGCGGGCCGCACGCCGGCGCGGCCCGCGCGGGCGGACCGC CGCCGCAAACGCGTTATGAT
Downstream 100 bases:
>100_bases CGCGTCTCGGCGTGCGCGGCGCAACCGGGCCGCGCGCGACGCGCGTTTCGCGCCGGCGGCGAAGCCCGCCTGCATCGCGG CCGCCCGCCCGGCGCCTGTC
Product: CAAX protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease; CAAX Amino Terminal Protease Family; Membrane Associated Protease; Caax Amino Terminal Protease Family; CAAX Amino Terminal Protease; CAAX Protease Family Protein; Membrane-Associated Protease
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRPFIRSFVVLFMSGNTFWLAAPWAALFVAALAAVWFPKLRAASVGLGALGYAGAFASGLIAPVALAPIALLAAAAYAVA PRRHAAVRVAGHAVFVALALALMLHWLPGFHNPRVIGPVRFTPDAAPFTMYLNLDKPLVGFWLLWVLPWLRPIDDRARAW RAGIVAAAATSAVCLVFALGVGLVGWAPKWPESAWLWLANNLLFVCFAEEALFRGYLQGGLSRLLANRVPAAGTVALVAA ALLFGAAHAAGGWQWVALATVAGVGYGLAYRAGGLQAAVLAHVGLNLAHFGLFTYPMLAVAR
Sequences:
>Translated_302_residues MRPFIRSFVVLFMSGNTFWLAAPWAALFVAALAAVWFPKLRAASVGLGALGYAGAFASGLIAPVALAPIALLAAAAYAVA PRRHAAVRVAGHAVFVALALALMLHWLPGFHNPRVIGPVRFTPDAAPFTMYLNLDKPLVGFWLLWVLPWLRPIDDRARAW RAGIVAAAATSAVCLVFALGVGLVGWAPKWPESAWLWLANNLLFVCFAEEALFRGYLQGGLSRLLANRVPAAGTVALVAA ALLFGAAHAAGGWQWVALATVAGVGYGLAYRAGGLQAAVLAHVGLNLAHFGLFTYPMLAVAR >Mature_302_residues MRPFIRSFVVLFMSGNTFWLAAPWAALFVAALAAVWFPKLRAASVGLGALGYAGAFASGLIAPVALAPIALLAAAAYAVA PRRHAAVRVAGHAVFVALALALMLHWLPGFHNPRVIGPVRFTPDAAPFTMYLNLDKPLVGFWLLWVLPWLRPIDDRARAW RAGIVAAAATSAVCLVFALGVGLVGWAPKWPESAWLWLANNLLFVCFAEEALFRGYLQGGLSRLLANRVPAAGTVALVAA ALLFGAAHAAGGWQWVALATVAGVGYGLAYRAGGLQAAVLAHVGLNLAHFGLFTYPMLAVAR
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31882; Mature: 31882
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPFIRSFVVLFMSGNTFWLAAPWAALFVAALAAVWFPKLRAASVGLGALGYAGAFASGL CCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IAPVALAPIALLAAAAYAVAPRRHAAVRVAGHAVFVALALALMLHWLPGFHNPRVIGPVR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEE FTPDAAPFTMYLNLDKPLVGFWLLWVLPWLRPIDDRARAWRAGIVAAAATSAVCLVFALG ECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGLVGWAPKWPESAWLWLANNLLFVCFAEEALFRGYLQGGLSRLLANRVPAAGTVALVAA HHHHCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALLFGAAHAAGGWQWVALATVAGVGYGLAYRAGGLQAAVLAHVGLNLAHFGLFTYPMLAV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH AR CC >Mature Secondary Structure MRPFIRSFVVLFMSGNTFWLAAPWAALFVAALAAVWFPKLRAASVGLGALGYAGAFASGL CCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH IAPVALAPIALLAAAAYAVAPRRHAAVRVAGHAVFVALALALMLHWLPGFHNPRVIGPVR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECEE FTPDAAPFTMYLNLDKPLVGFWLLWVLPWLRPIDDRARAWRAGIVAAAATSAVCLVFALG ECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGLVGWAPKWPESAWLWLANNLLFVCFAEEALFRGYLQGGLSRLLANRVPAAGTVALVAA HHHHCCCCCCCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALLFGAAHAAGGWQWVALATVAGVGYGLAYRAGGLQAAVLAHVGLNLAHFGLFTYPMLAV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA