Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445956
Identifier: 126445956
GI number: 126445956
Start: 1954296
End: 1954457
Strand: Reverse
Name: 126445956
Synonym: BMA10247_A2020
Alternate gene names: NA
Gene position: 1954457-1954296 (Counterclockwise)
Preceding gene: 126447851
Following gene: 126446608
Centisome position: 83.07
GC content: 70.37
Gene sequence:
>162_bases GTGGCCGCGCCGTTTCGTCAATGCTCGGTGCCGGGGTTGATCGTCGGCTGTCGTTGCGAGGCGGCGCGCGCCGCTCGGCG GGCAACGCGCCGCATCGCGCGGCGGCGTGCTGCGGCGTGCAAGAGGCGCGGGCATGTAATGTCTTGGTGCTTTGGTGTCT AG
Upstream 100 bases:
>100_bases CGGACCGGATCGATGAAAGCCTGACGCCCGGCGCGGCAACGCACCGGGCGGGCGGCAGCGCCCGTTCGGACCGGCGATTG AAACGGCGCGGCACCGCAAG
Downstream 100 bases:
>100_bases TGGCTTGCTCGAGGCGCGCGACGCGCATCGGCGAATGTCGCGAGTGTCGGCATGGTGGCAACACGCGCAGCCGCCCGTTT CGTCGCTCGCGTCGAGGCGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MAAPFRQCSVPGLIVGCRCEAARAARRATRRIARRRAAACKRRGHVMSWCFGV
Sequences:
>Translated_53_residues MAAPFRQCSVPGLIVGCRCEAARAARRATRRIARRRAAACKRRGHVMSWCFGV >Mature_52_residues AAPFRQCSVPGLIVGCRCEAARAARRATRRIARRRAAACKRRGHVMSWCFGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5889; Mature: 5758
Theoretical pI: Translated: 12.36; Mature: 12.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 13.2 %Cys+Met (Translated Protein) 9.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPFRQCSVPGLIVGCRCEAARAARRATRRIARRRAAACKRRGHVMSWCFGV CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure AAPFRQCSVPGLIVGCRCEAARAARRATRRIARRRAAACKRRGHVMSWCFGV CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA