Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is 126445953
Identifier: 126445953
GI number: 126445953
Start: 2039779
End: 2041440
Strand: Direct
Name: 126445953
Synonym: BMA10247_A2111
Alternate gene names: NA
Gene position: 2039779-2041440 (Clockwise)
Preceding gene: 126447079
Following gene: 126445707
Centisome position: 86.7
GC content: 68.65
Gene sequence:
>1662_bases ATGAAACGCAACAGTAAGCAGTTCGAAATCGGCGCATGGCTGGGCGCATGCGCGCTCGCCTTCGCCGGCGCGGCCTCGGC CGCCGCCGTCCAGGATCGCGATCACGACAGCCGCCCCGTCGACGCGAAGCGCGTGCTGCTGGTGAGCATTGATGGTCTGC ACGAGCAGGACCTCGCGCGCTGCATCGGCGCGAATACGTGCCCGAATCTCGCGCTGCTCGCGAAGTCGGGGGTCACGTAC ACGAACGCGCGCACGCCGGGGCTGTCGGATTCGTTCCCGGGCCTGGCCGCGCTGGTGACGGGCGGTTCGCCGAAGAGCGC GGGCCTCTTCTACGACGTGTCGTACGATCGCACGCTGTACGCGCCGTCGGATGCGACGTGCTCGGGCAAGCAAGGCTGGA ACGTCGTGTTCGACGAAACAACCGGCATCGACGCGATGAACGGCGGCGCGCTCACGCATCTCGACGGCGGCGGCGCGTTC AACCCGCAGGCGATCCCGCACGCGCGCGTGAACGGCCAGTGCGTGAGCGTCTATCCGCACGACTACGTGAAGACGAACAC GGTGTTCGAAGTCGTCAAGGAACATCTGCGCGGCTCGCACACCGCATGGGCGGACAAGCACGCGTGGGGCTACGACTGGG TGAACGGCCCGTCGGGCAAGGGCGTCGACGATCTCGCGCGCACCGAGATCAACTCGATCGATCCGGCCACGGGCACCCCC TACACCGACATCTATACGCATACCGAAAAGTTCGACGACTATCACGTGCAGGCGATCGTCAACCAGATCGACGGCAAGAA CTCGACGGGCACCGCGGCCGCGCCCGTGCCGACCCTGTTCGGCACGAACTTCCAGACGCTGTCGGTCGCGCAGAAGGCCA CCGTCGCGTCGGGCGGCGGCTATCTCGACGCGAGCTTCACGCCGGGGCCGGAAGTCGCGAACGCGATCGCGTACGTCGAC GGCGCGCTCGGCCGCATCGTCGCCGAGCTCAGGCAGCGCGGGCTGTACGATTCGACGGTGGTGATCGTCACCGCGAAGCA CGGCCAGTCGCCGACCGACCATACGAAGCTCGTGAAGCACGGCGACACGCTCACCGCGCTGCTCGAGGCGAACGGCTTCG TCGATCCGAACGGCAACTTCGGCCAGAACAACACCGCGTCGGGCAACCCGAACGACGGCACGGGCCTCGTCGGCACGGGC TTCGTGCAGACCGACGACGTCGGCCTCGTCTGGCTGCGCGACCCGCGCCAGTTGAGCGCGGCCGTCGCGACACTGAAGGC GAATCTCGGCTGCAACGCGCCGGGGATCTGCGCGGACGGCCCGCAGGCGTACATCCTGTATGGCCCGAGCGTCGCCGAGC GCTTCGGCGATCCGGCGCTCGGCCGCACGCCGGACATCGTCGTGCAGCCGAACCCGGGTGTGATCTACACGTCGAGCAAG AAGAAGGACGAAGAGCACGGCGGCAACGCGCCGGACGACAGCCACCTCGGCCTGCTCGTGTCATACGCGGGCTTGCGCCA GGGCCGCACGATCGACGCGCCGGTGCTGACGACGCAGGTCGCGCCGACGATCCTGCGCTCGCTCGGCCTCGAGCCGCGCC TGCTGCACGCGGTCGCGCTCGAAGGCACGCGCGTGCTGCCGGGCCTTGGCCTCGAGCGCTGA
Upstream 100 bases:
>100_bases GACAGACAAACGAAAGCGGCGCGTCACGACGCGTTAGCAATCCCCGTGCAAATTGCGGCTCCGGGTGTGGGACACAGCCG TTCTAACGACGAGGTCAACG
Downstream 100 bases:
>100_bases CGCAAGCGCCACGGGAGTGCGCCGGCGCCGGGCGAGGCCGGCGCGCCCCATGGCCGGCGGCCGCCCCGACGCGGCCCGAC CCGCCGCGACGGAACTCGCC
Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLARCIGANTCPNLALLAKSGVTY TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER
Sequences:
>Translated_553_residues MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLARCIGANTCPNLALLAKSGVTY TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER >Mature_553_residues MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLARCIGANTCPNLALLAKSGVTY TNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLYAPSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAF NPQAIPHARVNGQCVSVYPHDYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGGYLDASFTPGPEVANAIAYVD GALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKHGDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTG FVQTDDVGLVWLRDPRQLSAAVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVALEGTRVLPGLGLER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58032; Mature: 58032
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLAR CCCCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHH CIGANTCPNLALLAKSGVTYTNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLY HHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEE APSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAFNPQAIPHARVNGQCVSVYPH CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC DYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGG CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHEEECCCC YLDASFTPGPEVANAIAYVDGALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKH EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC GDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTGFVQTDDVGLVWLRDPRQLSA CCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEEECCHHHHHH AVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEECCCCEEEECCC KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVAL CCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC EGTRVLPGLGLER CCCEECCCCCCCC >Mature Secondary Structure MKRNSKQFEIGAWLGACALAFAGAASAAAVQDRDHDSRPVDAKRVLLVSIDGLHEQDLAR CCCCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHH CIGANTCPNLALLAKSGVTYTNARTPGLSDSFPGLAALVTGGSPKSAGLFYDVSYDRTLY HHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCEEE APSDATCSGKQGWNVVFDETTGIDAMNGGALTHLDGGGAFNPQAIPHARVNGQCVSVYPH CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC DYVKTNTVFEVVKEHLRGSHTAWADKHAWGYDWVNGPSGKGVDDLARTEINSIDPATGTP CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC YTDIYTHTEKFDDYHVQAIVNQIDGKNSTGTAAAPVPTLFGTNFQTLSVAQKATVASGGG CHHEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHEEECCCC YLDASFTPGPEVANAIAYVDGALGRIVAELRQRGLYDSTVVIVTAKHGQSPTDHTKLVKH EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC GDTLTALLEANGFVDPNGNFGQNNTASGNPNDGTGLVGTGFVQTDDVGLVWLRDPRQLSA CCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCEEECEEEECCEEEEEECCHHHHHH AVATLKANLGCNAPGICADGPQAYILYGPSVAERFGDPALGRTPDIVVQPNPGVIYTSSK HHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCEEEECCCCEEEECCC KKDEEHGGNAPDDSHLGLLVSYAGLRQGRTIDAPVLTTQVAPTILRSLGLEPRLLHAVAL CCHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEEECC EGTRVLPGLGLER CCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA