Definition Burkholderia mallei NCTC 10247 chromosome II, complete genome.
Accession NC_009079
Length 2,352,693

Click here to switch to the map view.

The map label for this gene is yycE [H]

Identifier: 126447079

GI number: 126447079

Start: 2038809

End: 2039198

Strand: Direct

Name: yycE [H]

Synonym: BMA10247_A2110

Alternate gene names: 126447079

Gene position: 2038809-2039198 (Clockwise)

Preceding gene: 126446120

Following gene: 126445953

Centisome position: 86.66

GC content: 66.67

Gene sequence:

>390_bases
ATGAATCCTCCCGTTCTGCGCGTCGCCCGGCCGACCAACGATATCGACACGCTCGTGCGTTTCTACACGAAGGCGCTCGG
CTTCGACGTCGTCGCCCGCTTCGAGAATCACGAAGGCTTCGACGGCGCGATCGTCGGCCGCGCCGGCTATCCGTGGCAAA
TCGAATTCACGCATCAGCACGGCGTGACGGTCGCGCGCGCACCGACCGCCGAGCATCTGCTCGTCTTTTATCTGCCCGAT
CGCGGCGCGTGGACCGAGGCCGTCGCGCGAATGCGCGCGTACGACGCGACGCCGTGCCGCTCGGAGAATCCGTACTGGGA
CCGCGAAGGCGTGACGTTCGAGGACCCGGACGGCTACCGGATCGTCCTGCAAAACGCGCAGCCGGCCTGA

Upstream 100 bases:

>100_bases
GGCGACGTTGCGCAGGGGCGCCGCCGCGTTTTCGGCCTATGCTGAAAACGCAGCTGCGCAACACCCCGTTCGTCGACTCT
TCGAAAACAGGAGTGCCGTG

Downstream 100 bases:

>100_bases
ACGCTCGCACGCGGCCGCGCCCGGACCGCGCGCGGCGGGTGGTGCGCGCGCGATGCGGCGCACAGCCGCGCGCCGGCAGC
CGCCGCGTGCGGCGCGCGGC

Product: glyoxalase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLPD
RGAWTEAVARMRAYDATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA

Sequences:

>Translated_129_residues
MNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLPD
RGAWTEAVARMRAYDATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA
>Mature_129_residues
MNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLPD
RGAWTEAVARMRAYDATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14637; Mature: 14637

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQH
CCCCEEEEECCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCEEEECCCCCCEEEEEECCC
GVTVARAPTAEHLLVFYLPDRGAWTEAVARMRAYDATPCRSENPYWDREGVTFEDPDGYR
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEE
IVLQNAQPA
EEEECCCCC
>Mature Secondary Structure
MNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQH
CCCCEEEEECCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCEEEECCCCCCEEEEEECCC
GVTVARAPTAEHLLVFYLPDRGAWTEAVARMRAYDATPCRSENPYWDREGVTFEDPDGYR
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCEE
IVLQNAQPA
EEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1312531; 7584024; 9384377 [H]