Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is irlS [H]
Identifier: 126445789
GI number: 126445789
Start: 1147794
End: 1149188
Strand: Reverse
Name: irlS [H]
Synonym: BMA10247_A1179
Alternate gene names: 126445789
Gene position: 1149188-1147794 (Counterclockwise)
Preceding gene: 126445741
Following gene: 126447722
Centisome position: 48.85
GC content: 69.03
Gene sequence:
>1395_bases ATGATCAGACGCCTGCTGCCCCGCACGCTGCGCGCGCGCCTGACGGCGCTCATCATCCTGTCGACCGCGGCGACGCTCGC GCTGAGCGGCGTCGCGCTCTACAGCGCGCTGCACAACCGGCTCGTCGGCATGTCGTCGTACGAGATGTCGGCGACGCTCG CGGCGATGCGCACGCATCTCGCGAACGTCGCGAACGTCGACGATATCCCGCGCAAATCGGATCTGTGGATCGATCAACTG CACGGCCATCAGAATCTGGATCTCGCGATCTACGACACCGACGGCCGCCTGCGCTTCGCCACGCGCGGCTTCGTCGCGCC GCGGCCCGCGCTCGGCGCGCCGCAAACGCGCGTGCCGGCGAGCGCCGCGCCCGCCGGCGCGACGTTCAGCTATCTCGCGG ACGACGCGCCGCTGCGCGGCGGGAACCCGCGCACCGCGCGCATCGTCGTGCAGTACGACGGCAAGAACGATCATGCGCTG CTGCGCGCATACGCGTACACGGTCGTCGTGATCGAGGTGCTCGCGGTCGTGCTGACGGCGGCGCTCGCCTACGGCATCGC GATGCTCGGCCTGAGCCCGCTGCGGCGGCTCGTCGCGCGCGCCGAGCAGATGTCGTCGAGCCGGCTCGCGCAGCCGCTGC CGGAGCTCGACACGTCGGGCGAGCTCAAGGAAATGGAGCACGCGTTCAACGCCATGCTCAAGCGCCTCGACGAATCGTTC GTCCGGCTGAGCCAGTTCTCGTCGAATCTCGCGCACGACATGCGCACGCCGCTCACGAACCTGCTCGCCGAGGCGCAGGT CGCGCTATCGAAGCCGCGCACGGCCGACGAATATCGCGACGTGATCGAATCGAGCATCGACGAGTATCAGCGTCTGTCGC GCATGATCGAGGACATGCTGTTCCTCGCGCGCTCCGACAACGCGCAGAGCCATCTGGCGATCCGCACGCTCGACGCGGCG GCACAAGCCGAGCGCGTCGCCGGCTATTACGAGCCGATGGCCGAGGATGCCGAAGTGAGCATCGTCGTGCGCGGCAAGGC CGAGGTTCGGGCGGACGCGCTGCTCTATCACCGCGCGCTCAGCAACCTGATCAGCAACGCGCTCAATCACGCGCCGCGCG GCTCGACGATCACGATCGAATGCGCGCAAGCCGCCGACGCGGCGACGATCAGCGTATCGGACACGGGCCGCGGCATCGAG GCGCCGCACCGCGAACGGATCTTCGAGCGGTTCTACCGCGTCGATCCGGCGCGGCACAATTCGGCGTCCGGCACGGGGCT CGGCCTGGCGATCGTGCGCTCGATCATGGAAAACCACGGCGGCACGTGCGGCGTCGACAGCGAGCCGCACGTGCGCACGA CGTTCTGGCTGAAGTTTCCCGCGCACGCGGCCTGA
Upstream 100 bases:
>100_bases TGCGCTCGAAGATCGACGACGCGTACGAGCCGAAGCTGATCCACACGGTGCGCGGGATGGGCTACGTGCTCGAAGTCAGA AGCGCGAGCGCGCCGAGCCG
Downstream 100 bases:
>100_bases TCCGCCGCGTCAGCGGCGTCAGCGGCGCTAGCGGAATCAGCGGCGGCCCGCGGGCGCGGACGCGCCCGGGCGCGCGGGCT GCCCGGCTTCGGTCGCCCGC
Product: sensor histidine kinase IrlS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MIRRLLPRTLRARLTALIILSTAATLALSGVALYSALHNRLVGMSSYEMSATLAAMRTHLANVANVDDIPRKSDLWIDQL HGHQNLDLAIYDTDGRLRFATRGFVAPRPALGAPQTRVPASAAPAGATFSYLADDAPLRGGNPRTARIVVQYDGKNDHAL LRAYAYTVVVIEVLAVVLTAALAYGIAMLGLSPLRRLVARAEQMSSSRLAQPLPELDTSGELKEMEHAFNAMLKRLDESF VRLSQFSSNLAHDMRTPLTNLLAEAQVALSKPRTADEYRDVIESSIDEYQRLSRMIEDMLFLARSDNAQSHLAIRTLDAA AQAERVAGYYEPMAEDAEVSIVVRGKAEVRADALLYHRALSNLISNALNHAPRGSTITIECAQAADAATISVSDTGRGIE APHRERIFERFYRVDPARHNSASGTGLGLAIVRSIMENHGGTCGVDSEPHVRTTFWLKFPAHAA
Sequences:
>Translated_464_residues MIRRLLPRTLRARLTALIILSTAATLALSGVALYSALHNRLVGMSSYEMSATLAAMRTHLANVANVDDIPRKSDLWIDQL HGHQNLDLAIYDTDGRLRFATRGFVAPRPALGAPQTRVPASAAPAGATFSYLADDAPLRGGNPRTARIVVQYDGKNDHAL LRAYAYTVVVIEVLAVVLTAALAYGIAMLGLSPLRRLVARAEQMSSSRLAQPLPELDTSGELKEMEHAFNAMLKRLDESF VRLSQFSSNLAHDMRTPLTNLLAEAQVALSKPRTADEYRDVIESSIDEYQRLSRMIEDMLFLARSDNAQSHLAIRTLDAA AQAERVAGYYEPMAEDAEVSIVVRGKAEVRADALLYHRALSNLISNALNHAPRGSTITIECAQAADAATISVSDTGRGIE APHRERIFERFYRVDPARHNSASGTGLGLAIVRSIMENHGGTCGVDSEPHVRTTFWLKFPAHAA >Mature_464_residues MIRRLLPRTLRARLTALIILSTAATLALSGVALYSALHNRLVGMSSYEMSATLAAMRTHLANVANVDDIPRKSDLWIDQL HGHQNLDLAIYDTDGRLRFATRGFVAPRPALGAPQTRVPASAAPAGATFSYLADDAPLRGGNPRTARIVVQYDGKNDHAL LRAYAYTVVVIEVLAVVLTAALAYGIAMLGLSPLRRLVARAEQMSSSRLAQPLPELDTSGELKEMEHAFNAMLKRLDESF VRLSQFSSNLAHDMRTPLTNLLAEAQVALSKPRTADEYRDVIESSIDEYQRLSRMIEDMLFLARSDNAQSHLAIRTLDAA AQAERVAGYYEPMAEDAEVSIVVRGKAEVRADALLYHRALSNLISNALNHAPRGSTITIECAQAADAATISVSDTGRGIE APHRERIFERFYRVDPARHNSASGTGLGLAIVRSIMENHGGTCGVDSEPHVRTTFWLKFPAHAA
Specific function: Member of the two-component regulatory system irlR/irlS. May be involved in invasion of eukaryotic cells and heavy-metal resistance. Probably activates irlR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=332, Percent_Identity=36.144578313253, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1788279, Length=286, Percent_Identity=33.9160839160839, Blast_Score=174, Evalue=9e-45, Organism=Escherichia coli, GI1786600, Length=203, Percent_Identity=29.5566502463054, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1790346, Length=272, Percent_Identity=30.8823529411765, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1787894, Length=307, Percent_Identity=28.6644951140065, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI145693157, Length=255, Percent_Identity=25.4901960784314, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1790861, Length=266, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=27.4678111587983, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789403, Length=450, Percent_Identity=25.3333333333333, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788393, Length=253, Percent_Identity=23.7154150197628, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=227, Percent_Identity=28.1938325991189, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789808, Length=295, Percent_Identity=28.4745762711864, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788713, Length=226, Percent_Identity=21.6814159292035, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1789149, Length=233, Percent_Identity=24.8927038626609, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788549, Length=233, Percent_Identity=27.4678111587983, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082128, Length=225, Percent_Identity=28, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1790551, Length=289, Percent_Identity=25.6055363321799, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI48994928, Length=223, Percent_Identity=25.5605381165919, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081816, Length=235, Percent_Identity=25.1063829787234, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR006290 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 50653; Mature: 50653
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRLLPRTLRARLTALIILSTAATLALSGVALYSALHNRLVGMSSYEMSATLAAMRTHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ANVANVDDIPRKSDLWIDQLHGHQNLDLAIYDTDGRLRFATRGFVAPRPALGAPQTRVPA HHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC SAAPAGATFSYLADDAPLRGGNPRTARIVVQYDGKNDHALLRAYAYTVVVIEVLAVVLTA CCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ALAYGIAMLGLSPLRRLVARAEQMSSSRLAQPLPELDTSGELKEMEHAFNAMLKRLDESF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VRLSQFSSNLAHDMRTPLTNLLAEAQVALSKPRTADEYRDVIESSIDEYQRLSRMIEDML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLARSDNAQSHLAIRTLDAAAQAERVAGYYEPMAEDAEVSIVVRGKAEVRADALLYHRAL HHHCCCCCCHHEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHH SNLISNALNHAPRGSTITIECAQAADAATISVSDTGRGIEAPHRERIFERFYRVDPARHN HHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC SASGTGLGLAIVRSIMENHGGTCGVDSEPHVRTTFWLKFPAHAA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MIRRLLPRTLRARLTALIILSTAATLALSGVALYSALHNRLVGMSSYEMSATLAAMRTHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ANVANVDDIPRKSDLWIDQLHGHQNLDLAIYDTDGRLRFATRGFVAPRPALGAPQTRVPA HHHCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCC SAAPAGATFSYLADDAPLRGGNPRTARIVVQYDGKNDHALLRAYAYTVVVIEVLAVVLTA CCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH ALAYGIAMLGLSPLRRLVARAEQMSSSRLAQPLPELDTSGELKEMEHAFNAMLKRLDESF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VRLSQFSSNLAHDMRTPLTNLLAEAQVALSKPRTADEYRDVIESSIDEYQRLSRMIEDML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLARSDNAQSHLAIRTLDAAAQAERVAGYYEPMAEDAEVSIVVRGKAEVRADALLYHRAL HHHCCCCCCHHEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHH SNLISNALNHAPRGSTITIECAQAADAATISVSDTGRGIEAPHRERIFERFYRVDPARHN HHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCC SASGTGLGLAIVRSIMENHGGTCGVDSEPHVRTTFWLKFPAHAA CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9393784 [H]