Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is napA [H]
Identifier: 126445760
GI number: 126445760
Start: 1058936
End: 1060168
Strand: Reverse
Name: napA [H]
Synonym: BMA10247_A1126
Alternate gene names: 126445760
Gene position: 1060168-1058936 (Counterclockwise)
Preceding gene: 126447224
Following gene: 126447790
Centisome position: 45.06
GC content: 66.59
Gene sequence:
>1233_bases ATGAACAGCATCTTCGTCTTCCTGTCGCAGGCCCTGCTGATCGTCGCAGTGCCGCCATTGCTGATGAACTACCTGCGCGT CGGGGCGGTCGTGCCGCTCGTCGTCGTGCAGATCGTGTTCGGCGTCGTGATCGGCCCGTCGGGCCTCGGACGCCTGTCGC CCGAAACCTATACGGCGCTCTTTCCTCCCGATTCGCTGACGTTCCTGTCGCACGTCTCGGCGATCGCGCTGTTCTTCTTC GCGATCGTCACCGGCCTGCATCTCGACGCCACGGGGCTGCGGGGCCACGGCCGCAAGCTCGGCTTCATCTCGACGGCGAG CATGCTCGCGCCGATGTCGCTCGGCGTGCTCGCGGGGATCGCGATCAGCGCGCGATACCCGCAAGCGCTCGATCCGCATG CGTCCGTCGCCGAATTCGTCGCCGGCATCGGCATCTGCTGCGGCGTGACCGCGCTGCCCGTTCTCGCGGCGATCCTGCGC GAGACGAACCTCACCTCGCGCCGCCTCGGACAGTTCTCGCTCGCGCTCGCCGCGGTCAACGACGGCATGCTGTGGATTCT GCTCGCCGCGTTCCTCTCGGTGACGGGCGCGAACGCGGCGAACGGCGGCAGACTTTTCATTACCTCGGCTCTCATCGTGC TGTATTTCGTGTCGATCCTGTTCGTCGTGCGTCCGTTGCTGCTCGTGCTGGCGAACCGGCTCCGGACGTCCGTCGATACG CAAATCCTCATCGCATGCGCCGTGGCCGTCGCGTCGGCCGCCGCCACCGACCGCCTCGGCCTGCACTACCTGCTCGGCGC GTTCATCGCCGGCGCGATCATCCCCGGCGCATGGCGCGACGCCTTGCTCGAACGCATGCAGCCGGTCACCGTCAACGTCC TCACCCCGTTCTTTTTCATCAGCACCGGGTTGCGCGTGCTGATCGACGTCGACGCCCCGGGCTTTCTGCAGATCACGCTG ATCATCACGCTCTGCACCGCGATCGGAAAAATCGCCGGCACCACGCTCGCGGCCCGCATGACCGGCGAATCCTGGGGATT CTGTCTCGGGCTCGGGTTCCTCGCCCAGGCCAAGGGGCTGATGGAACTCGTCGTCGCGACGATCCTGCTCGACTCTCACG TGATCTCGCGCACCGTGTTCTCCGCGCTGATCCTGATGGCGCTGATCAGCACGGCTTTCGCGATGCCGCTGCTGCGATTG AAACCGGTGCGCGGCGCGGCGCTGTCCGCGTGA
Upstream 100 bases:
>100_bases CGGCGGGCGCGGCGTTCGTCCGGTCGGCGCGCCACGGCCACGGCTGCGGCCGCGCGAAAGAAACGACGTTGCCCGCGCAA CAACATCAACGGGAGTAAGC
Downstream 100 bases:
>100_bases CACGCGCGGGCTTCGCGCCGCTTCGCCGGGGATTCGGGGCACCGCGAAAACCGGCGAATTCGCCATATTTCGGCCAAGTA TATCGATAGCATTTCGGCGT
Product: monovalent cation:proton antiporter-2 (CPA2) family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MNSIFVFLSQALLIVAVPPLLMNYLRVGAVVPLVVVQIVFGVVIGPSGLGRLSPETYTALFPPDSLTFLSHVSAIALFFF AIVTGLHLDATGLRGHGRKLGFISTASMLAPMSLGVLAGIAISARYPQALDPHASVAEFVAGIGICCGVTALPVLAAILR ETNLTSRRLGQFSLALAAVNDGMLWILLAAFLSVTGANAANGGRLFITSALIVLYFVSILFVVRPLLLVLANRLRTSVDT QILIACAVAVASAAATDRLGLHYLLGAFIAGAIIPGAWRDALLERMQPVTVNVLTPFFFISTGLRVLIDVDAPGFLQITL IITLCTAIGKIAGTTLAARMTGESWGFCLGLGFLAQAKGLMELVVATILLDSHVISRTVFSALILMALISTAFAMPLLRL KPVRGAALSA
Sequences:
>Translated_410_residues MNSIFVFLSQALLIVAVPPLLMNYLRVGAVVPLVVVQIVFGVVIGPSGLGRLSPETYTALFPPDSLTFLSHVSAIALFFF AIVTGLHLDATGLRGHGRKLGFISTASMLAPMSLGVLAGIAISARYPQALDPHASVAEFVAGIGICCGVTALPVLAAILR ETNLTSRRLGQFSLALAAVNDGMLWILLAAFLSVTGANAANGGRLFITSALIVLYFVSILFVVRPLLLVLANRLRTSVDT QILIACAVAVASAAATDRLGLHYLLGAFIAGAIIPGAWRDALLERMQPVTVNVLTPFFFISTGLRVLIDVDAPGFLQITL IITLCTAIGKIAGTTLAARMTGESWGFCLGLGFLAQAKGLMELVVATILLDSHVISRTVFSALILMALISTAFAMPLLRL KPVRGAALSA >Mature_410_residues MNSIFVFLSQALLIVAVPPLLMNYLRVGAVVPLVVVQIVFGVVIGPSGLGRLSPETYTALFPPDSLTFLSHVSAIALFFF AIVTGLHLDATGLRGHGRKLGFISTASMLAPMSLGVLAGIAISARYPQALDPHASVAEFVAGIGICCGVTALPVLAAILR ETNLTSRRLGQFSLALAAVNDGMLWILLAAFLSVTGANAANGGRLFITSALIVLYFVSILFVVRPLLLVLANRLRTSVDT QILIACAVAVASAAATDRLGLHYLLGAFIAGAIIPGAWRDALLERMQPVTVNVLTPFFFISTGLRVLIDVDAPGFLQITL IITLCTAIGKIAGTTLAARMTGESWGFCLGLGFLAQAKGLMELVVATILLDSHVISRTVFSALILMALISTAFAMPLLRL KPVRGAALSA
Specific function: This is a Na(+)/H(+) antiporter. It can mediate sodium uptake when a transmembrane pH gradient is applied [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322367, Length=411, Percent_Identity=31.3868613138686, Blast_Score=151, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 43003; Mature: 43003
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIFVFLSQALLIVAVPPLLMNYLRVGAVVPLVVVQIVFGVVIGPSGLGRLSPETYTAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE FPPDSLTFLSHVSAIALFFFAIVTGLHLDATGLRGHGRKLGFISTASMLAPMSLGVLAGI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH AISARYPQALDPHASVAEFVAGIGICCGVTALPVLAAILRETNLTSRRLGQFSLALAAVN HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC DGMLWILLAAFLSVTGANAANGGRLFITSALIVLYFVSILFVVRPLLLVLANRLRTSVDT CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QILIACAVAVASAAATDRLGLHYLLGAFIAGAIIPGAWRDALLERMQPVTVNVLTPFFFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH STGLRVLIDVDAPGFLQITLIITLCTAIGKIAGTTLAARMTGESWGFCLGLGFLAQAKGL HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH MELVVATILLDSHVISRTVFSALILMALISTAFAMPLLRLKPVRGAALSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNSIFVFLSQALLIVAVPPLLMNYLRVGAVVPLVVVQIVFGVVIGPSGLGRLSPETYTAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE FPPDSLTFLSHVSAIALFFFAIVTGLHLDATGLRGHGRKLGFISTASMLAPMSLGVLAGI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH AISARYPQALDPHASVAEFVAGIGICCGVTALPVLAAILRETNLTSRRLGQFSLALAAVN HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC DGMLWILLAAFLSVTGANAANGGRLFITSALIVLYFVSILFVVRPLLLVLANRLRTSVDT CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QILIACAVAVASAAATDRLGLHYLLGAFIAGAIIPGAWRDALLERMQPVTVNVLTPFFFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHH STGLRVLIDVDAPGFLQITLIITLCTAIGKIAGTTLAARMTGESWGFCLGLGFLAQAKGL HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHH MELVVATILLDSHVISRTVFSALILMALISTAFAMPLLRLKPVRGAALSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1312090; 1325937 [H]