Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
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Accession | NC_009075 |
Length | 3,127,456 |
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The map label for this gene is 126442663
Identifier: 126442663
GI number: 126442663
Start: 353274
End: 354398
Strand: Reverse
Name: 126442663
Synonym: BURPS668_A0386
Alternate gene names: NA
Gene position: 354398-353274 (Counterclockwise)
Preceding gene: 284159970
Following gene: 126443105
Centisome position: 11.33
GC content: 70.84
Gene sequence:
>1125_bases TTGCGTCGCCGGCAACCGGCGCGCGCTCGGCGGCGGGGAAGCGGCGCACGCCCGCCGGAGGGAACGGATGATGACGATCG ATGTCCGATCGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTT GGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTTGGCGCTCGGCGCTCGGC GCTCGGCGCTCGGCGCTCGGCGCTCGGCGCTTGGCGAATGGCGCTCGGGGAGTGGCGCTCGGCGAGTGGCGAGTAATCGA CGCATCAGGGCGGCGGCGCCTGGTCGGCATGCGGCGCGCCGCGCATCGGCATGGCGCTCGCGCGGCTCGCACGCCGCGGA CCGCCGGTGACAGGCGACGAACGGGCGCCGGCGGGAGAACGCGCGCGGCGTCGCCGGCGCGAGCGGACGTAAGCGCACAC AAGCGGGCGCGAGCGGGCACGAGCGGGCGCCGGCGCGCTTCGCCGGCCGCCCCGCCGCTAGTGCGCCGGCACGACGAATT TCCTTGCGTATCGCCCGCCCCCTTTCTAGAGTGGAGCGCAAAGAGCCGGATTGCATCGGCGGCGCGCGCACCGCGCCGCA TTGTTCAACATATCCATTCAATCGATAGCGAAGGAACGTCGATGACCGACATCGTGGACCATGCGCGCGGCGCCCTGCGC GCGCAACCCTTCAGCATGCTGCTCGGCACCGAGCTCGTGCATATCGGCGGCGAAGAGGCGTCGCTGCGCCTGCCGATTCG CGACGAGCTCAGGCAGCAGTACGGCTTCGTCCACGGCGGCGTCATCAGCTATCTCGCGGACAACGCGCTCACGTTCGCGG GCGCGCTCGCGCTCGGGCCGCGCGTCGTCACGGGGGAATACAAGATCAATTACCTGCGCCCGGCCGTCGTCGGCACGCTG ATTGCGCGCGCGAAGCTGATTTATGCGGGACGGAATCAGGCGACCTGCCAATGCCATGTGTTCGTGATCGACGGCGATCA CGAGCGGCTCGTCGCGGTCGCGCAGGGCACGATCAATCGGGTCGGTGACGGGCGCGAGCCGGGCGCGGCCGAAGAAAAGG CATAA
Upstream 100 bases:
>100_bases GCGCGCTTTCGCTATCTACCAGATTTGGTAGTCCCCGCGGGCGGGCGACCGGCGCGACGCGCGTTGCGGCGCGCCCATCG CACAATGCCCGGCCGGATCG
Downstream 100 bases:
>100_bases CGCGGCGGCAAGGCCGCCGCACGCCCGATCGCCGCGCCCCGCGCCCGCGGCGTCAGAACGCGTCGCCCGGCACGCGCACC CAGCCCTCCATCAGCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase; Phenylacetic Acid Degradation Protein PaaI; Domain 1 Protein; Thioesterase Family Protein; Phenylacetic Acid Degradation Protein PaaD; Thioesterase/Thiol Ester Dehydrase-Isomerase
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MRRRQPARARRRGSGARPPEGTDDDDRCPIGAWRLALGAWRLALGAWRLALGAWRLALGAWRLALGAWRLALGAWRSALG ARRSALGARRLANGARGVALGEWRVIDASGRRRLVGMRRAAHRHGARAARTPRTAGDRRRTGAGGRTRAASPARADVSAH KRARAGTSGRRRASPAAPPLVRRHDEFPCVSPAPFLEWSAKSRIASAARAPRRIVQHIHSIDSEGTSMTDIVDHARGALR AQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGPRVVTGEYKINYLRPAVVGTL IARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINRVGDGREPGAAEEKA
Sequences:
>Translated_374_residues MRRRQPARARRRGSGARPPEGTDDDDRCPIGAWRLALGAWRLALGAWRLALGAWRLALGAWRLALGAWRLALGAWRSALG ARRSALGARRLANGARGVALGEWRVIDASGRRRLVGMRRAAHRHGARAARTPRTAGDRRRTGAGGRTRAASPARADVSAH KRARAGTSGRRRASPAAPPLVRRHDEFPCVSPAPFLEWSAKSRIASAARAPRRIVQHIHSIDSEGTSMTDIVDHARGALR AQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGPRVVTGEYKINYLRPAVVGTL IARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINRVGDGREPGAAEEKA >Mature_374_residues MRRRQPARARRRGSGARPPEGTDDDDRCPIGAWRLALGAWRLALGAWRLALGAWRLALGAWRLALGAWRLALGAWRSALG ARRSALGARRLANGARGVALGEWRVIDASGRRRLVGMRRAAHRHGARAARTPRTAGDRRRTGAGGRTRAASPARADVSAH KRARAGTSGRRRASPAAPPLVRRHDEFPCVSPAPFLEWSAKSRIASAARAPRRIVQHIHSIDSEGTSMTDIVDHARGALR AQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGPRVVTGEYKINYLRPAVVGTL IARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINRVGDGREPGAAEEKA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40442; Mature: 40442
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRQPARARRRGSGARPPEGTDDDDRCPIGAWRLALGAWRLALGAWRLALGAWRLALGA CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRLALGAWRLALGAWRSALGARRSALGARRLANGARGVALGEWRVIDASGRRRLVGMRRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHH AHRHGARAARTPRTAGDRRRTGAGGRTRAASPARADVSAHKRARAGTSGRRRASPAAPPL HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH VRRHDEFPCVSPAPFLEWSAKSRIASAARAPRRIVQHIHSIDSEGTSMTDIVDHARGALR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGP CCHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC RVVTGEYKINYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINR EEEECCEEEEEEHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCEEEEEHHHHHHH VGDGREPGAAEEKA CCCCCCCCCCCCCC >Mature Secondary Structure MRRRQPARARRRGSGARPPEGTDDDDRCPIGAWRLALGAWRLALGAWRLALGAWRLALGA CCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRLALGAWRLALGAWRSALGARRSALGARRLANGARGVALGEWRVIDASGRRRLVGMRRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHH AHRHGARAARTPRTAGDRRRTGAGGRTRAASPARADVSAHKRARAGTSGRRRASPAAPPL HHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCH VRRHDEFPCVSPAPFLEWSAKSRIASAARAPRRIVQHIHSIDSEGTSMTDIVDHARGALR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AQPFSMLLGTELVHIGGEEASLRLPIRDELRQQYGFVHGGVISYLADNALTFAGALALGP CCHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC RVVTGEYKINYLRPAVVGTLIARAKLIYAGRNQATCQCHVFVIDGDHERLVAVAQGTINR EEEECCEEEEEEHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEECCCCEEEEEHHHHHHH VGDGREPGAAEEKA CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA