Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207990
Identifier: 126207990
GI number: 126207990
Start: 574385
End: 574756
Strand: Direct
Name: 126207990
Synonym: APL_0506
Alternate gene names: NA
Gene position: 574385-574756 (Clockwise)
Preceding gene: 126207989
Following gene: 126207991
Centisome position: 25.25
GC content: 41.67
Gene sequence:
>372_bases ATGTTAGATGGATTTACTAAGGCAATGGGATTGTTGGTTGGTGGATTAGCTTTGCTGGTGGTTGCCCTTGGCGGTTGGTC GCTTTATCAATCATCAAAGATTGACACTTTGAATGCCGAAGTTAAAGCAAAGGATTCATTGATAGCAGAACAGCAAGCAG TAAACCAAGAGTTGATAACTCAACTGGAAACCGAAAAGCAAGCGGTTGAATATCAGCAAAAGATTACTAACGAATTAAAA GCACAGATGGAAACGGAGCGTGAGAATGTTAAAACAATTCTTATCAAAGAGCCGTGTGGCGGTGTTGCTATGCCTAGTGC TGTTATCGACAGTATTAAGCGGTTGCACTCAGTCGGCAGTAACAAAGACTAA
Upstream 100 bases:
>100_bases GGTTTGTAGGATTGGCGGTGCGGTTATGGGACTAAGTAATTTAGGTGGCGAAAGCGTAAACAGAAGAGCCTAAACCGCAC CGCTATTTAAGGTGGTGTTT
Downstream 100 bases:
>100_bases TTATATGTATCCGCCAGCTGCTTATTTAGTGCAGTGTGAGCGGTCAGAGTTTAGTGGCAAAACATATGCAGATGCTATTG ATTACTTGATGATTGTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLDGFTKAMGLLVGGLALLVVALGGWSLYQSSKIDTLNAEVKAKDSLIAEQQAVNQELITQLETEKQAVEYQQKITNELK AQMETERENVKTILIKEPCGGVAMPSAVIDSIKRLHSVGSNKD
Sequences:
>Translated_123_residues MLDGFTKAMGLLVGGLALLVVALGGWSLYQSSKIDTLNAEVKAKDSLIAEQQAVNQELITQLETEKQAVEYQQKITNELK AQMETERENVKTILIKEPCGGVAMPSAVIDSIKRLHSVGSNKD >Mature_123_residues MLDGFTKAMGLLVGGLALLVVALGGWSLYQSSKIDTLNAEVKAKDSLIAEQQAVNQELITQLETEKQAVEYQQKITNELK AQMETERENVKTILIKEPCGGVAMPSAVIDSIKRLHSVGSNKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13373; Mature: 13373
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGFTKAMGLLVGGLALLVVALGGWSLYQSSKIDTLNAEVKAKDSLIAEQQAVNQELIT CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QLETEKQAVEYQQKITNELKAQMETERENVKTILIKEPCGGVAMPSAVIDSIKRLHSVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC NKD CCC >Mature Secondary Structure MLDGFTKAMGLLVGGLALLVVALGGWSLYQSSKIDTLNAEVKAKDSLIAEQQAVNQELIT CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QLETEKQAVEYQQKITNELKAQMETERENVKTILIKEPCGGVAMPSAVIDSIKRLHSVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC NKD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA