The gene/protein map for NC_009053 is currently unavailable.
Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

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The map label for this gene is ydfG [C]

Identifier: 126207952

GI number: 126207952

Start: 539525

End: 540274

Strand: Direct

Name: ydfG [C]

Synonym: APL_0468

Alternate gene names: 126207952

Gene position: 539525-540274 (Clockwise)

Preceding gene: 126207951

Following gene: 126207953

Centisome position: 23.72

GC content: 42.8

Gene sequence:

>750_bases
ATGAAAACAGCATTAGTGACCGGTGCAACGGCAGGATTCGGTTTAGCAATTTGTAAATTATTGATTCAATCAGGTTATAA
AGTGATTGGTACCGGCAGACGTAAGGAACGCCTTGACGAATTACATTCGCAATTAGGCAATAATTTTTTACCGCTTGCGT
TTGATGTCAGTGATGATGCGGCAACCACTCAGGCGTTAAATAACCGTCCGGCAGGCTGGCAAGCGGTGGATTTATTAGTC
AATAATGCCGGATTAGCATTAGGGTTGGAGCCGGCTTATAAAACCGATTTAAAAGATTGGTATCAGATGATCGATACCAA
TATTAAAGGGCTTGTAACGGTTACTCGTTTGATTTTACCGGAAATGGTAGAACGTAATAGCGGACATATCATCAATTTAG
GTTCAATCGCCGGTAATTATCCTTATCCGGGCGGTAATGTTTATGGCGGCACAAAAGCCTTTGTTAAACAATTCAGCCTG
AATTTACGTGCGGATTTAGCCGGTACGAAAGTGCGTGTAACGAATGTAGAACCCGGTTTATGCGGCGGTACGGAATTTTC
CAATGTACGCTTTAAAGGCGATGACGACAAAGCCGCAAAAGTATATGAAAACGTGAACTATGTCGCACCGGAAGATATTG
CCAATATTGTGTTATGGCTAAACCAACAACCGGAACACGTTAATATTAACCGTATTGAAGTGATGCCGACCGCACAAACT
TTCTCACCACTTGCGGTGGCAAGAGGTTAA

Upstream 100 bases:

>100_bases
ATGAGGTTTAAGCTAACAAGCGGTTGTATTTTGTGAAAAATTTGCAAAATATGACCGCTTGTTATTTATATGATTTAAAA
ATGATAAGAGGACAAACACA

Downstream 100 bases:

>100_bases
TTTCTAACTTGTTACCCCTCTTTGCTAAAGAGGGGAGTTTATAACTCATTGAGTTATAAGGTTTCAAACCGTTCTTACAC
CAATATTTCTCTTCTTTAAT

Product: NADP-dependent dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKTALVTGATAGFGLAICKLLIQSGYKVIGTGRRKERLDELHSQLGNNFLPLAFDVSDDAATTQALNNRPAGWQAVDLLV
NNAGLALGLEPAYKTDLKDWYQMIDTNIKGLVTVTRLILPEMVERNSGHIINLGSIAGNYPYPGGNVYGGTKAFVKQFSL
NLRADLAGTKVRVTNVEPGLCGGTEFSNVRFKGDDDKAAKVYENVNYVAPEDIANIVLWLNQQPEHVNINRIEVMPTAQT
FSPLAVARG

Sequences:

>Translated_249_residues
MKTALVTGATAGFGLAICKLLIQSGYKVIGTGRRKERLDELHSQLGNNFLPLAFDVSDDAATTQALNNRPAGWQAVDLLV
NNAGLALGLEPAYKTDLKDWYQMIDTNIKGLVTVTRLILPEMVERNSGHIINLGSIAGNYPYPGGNVYGGTKAFVKQFSL
NLRADLAGTKVRVTNVEPGLCGGTEFSNVRFKGDDDKAAKVYENVNYVAPEDIANIVLWLNQQPEHVNINRIEVMPTAQT
FSPLAVARG
>Mature_249_residues
MKTALVTGATAGFGLAICKLLIQSGYKVIGTGRRKERLDELHSQLGNNFLPLAFDVSDDAATTQALNNRPAGWQAVDLLV
NNAGLALGLEPAYKTDLKDWYQMIDTNIKGLVTVTRLILPEMVERNSGHIINLGSIAGNYPYPGGNVYGGTKAFVKQFSL
NLRADLAGTKVRVTNVEPGLCGGTEFSNVRFKGDDDKAAKVYENVNYVAPEDIANIVLWLNQQPEHVNINRIEVMPTAQT
FSPLAVARG

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=249, Percent_Identity=32.1285140562249, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI7705855, Length=193, Percent_Identity=32.1243523316062, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI20149619, Length=189, Percent_Identity=30.1587301587302, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI32483357, Length=230, Percent_Identity=28.695652173913, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI157739938, Length=185, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI40548397, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI214010158, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI214010156, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI22758144, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI150247226, Length=196, Percent_Identity=30.1020408163265, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4557649, Length=214, Percent_Identity=29.4392523364486, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI7657478, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI40254992, Length=180, Percent_Identity=28.8888888888889, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI22507405, Length=181, Percent_Identity=30.939226519337, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI7706318, Length=182, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI5031737, Length=225, Percent_Identity=28.4444444444444, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4504503, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4758504, Length=232, Percent_Identity=26.2931034482759, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI126723191, Length=177, Percent_Identity=27.683615819209, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI126723750, Length=237, Percent_Identity=26.5822784810127, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI7705925, Length=178, Percent_Identity=28.0898876404494, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI19923817, Length=187, Percent_Identity=25.1336898395722, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI19743808, Length=181, Percent_Identity=29.2817679558011, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=28.2722513089005, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1787820, Length=244, Percent_Identity=61.4754098360656, Blast_Score=313, Evalue=5e-87,
Organism=Escherichia coli, GI1787335, Length=221, Percent_Identity=31.2217194570136, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI87082100, Length=183, Percent_Identity=34.4262295081967, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786812, Length=244, Percent_Identity=27.0491803278689, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI2367175, Length=239, Percent_Identity=25.9414225941423, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789208, Length=237, Percent_Identity=25.3164556962025, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1790717, Length=181, Percent_Identity=25.9668508287293, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=186, Percent_Identity=30.6451612903226, Blast_Score=89, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17562904, Length=244, Percent_Identity=30.327868852459, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=240, Percent_Identity=27.9166666666667, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=189, Percent_Identity=32.8042328042328, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17560220, Length=245, Percent_Identity=29.3877551020408, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=237, Percent_Identity=29.535864978903, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=187, Percent_Identity=27.807486631016, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17565030, Length=245, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=188, Percent_Identity=30.8510638297872, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=239, Percent_Identity=28.8702928870293, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=239, Percent_Identity=26.3598326359833, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=188, Percent_Identity=30.3191489361702, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=229, Percent_Identity=27.5109170305677, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17560676, Length=199, Percent_Identity=27.1356783919598, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=236, Percent_Identity=26.6949152542373, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=240, Percent_Identity=25, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=238, Percent_Identity=27.3109243697479, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=245, Percent_Identity=24.0816326530612, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=239, Percent_Identity=24.6861924686192, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=228, Percent_Identity=27.6315789473684, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25152911, Length=205, Percent_Identity=27.8048780487805, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=230, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=257, Percent_Identity=35.0194552529183, Blast_Score=153, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6322067, Length=183, Percent_Identity=32.7868852459016, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6322226, Length=191, Percent_Identity=26.7015706806283, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=27, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319635, Length=186, Percent_Identity=24.1935483870968, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI116007236, Length=252, Percent_Identity=30.1587301587302, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281364494, Length=254, Percent_Identity=28.740157480315, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24641232, Length=256, Percent_Identity=29.6875, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24641388, Length=254, Percent_Identity=30.3149606299213, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24643142, Length=177, Percent_Identity=34.4632768361582, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24663911, Length=253, Percent_Identity=27.6679841897233, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI21358495, Length=240, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI23397609, Length=181, Percent_Identity=31.4917127071823, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28571526, Length=209, Percent_Identity=31.1004784688995, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21357041, Length=204, Percent_Identity=30.8823529411765, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28571387, Length=253, Percent_Identity=28.0632411067194, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI116007234, Length=254, Percent_Identity=28.740157480315, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648693, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355889, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI116007238, Length=185, Percent_Identity=32.4324324324324, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI161076933, Length=182, Percent_Identity=28.021978021978, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24584748, Length=182, Percent_Identity=28.021978021978, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI28574402, Length=185, Percent_Identity=31.3513513513514, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24584744, Length=185, Percent_Identity=31.3513513513514, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355631, Length=170, Percent_Identity=31.1764705882353, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24644339, Length=183, Percent_Identity=28.9617486338798, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648944, Length=240, Percent_Identity=25.8333333333333, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007232, Length=187, Percent_Identity=32.0855614973262, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355319, Length=197, Percent_Identity=25.3807106598985, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27004; Mature: 27004

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MKTALVTGATAGFGLAICKLLIQSGYKVIGTGRRKERLDELHSQLGNNFLPLAFDVSDDA
CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCH
ATTQALNNRPAGWQAVDLLVNNAGLALGLEPAYKTDLKDWYQMIDTNIKGLVTVTRLILP
HHHHHHCCCCCCHHEEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EMVERNSGHIINLGSIAGNYPYPGGNVYGGTKAFVKQFSLNLRADLAGTKVRVTNVEPGL
HHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEECCCCC
CGGTEFSNVRFKGDDDKAAKVYENVNYVAPEDIANIVLWLNQQPEHVNINRIEVMPTAQT
CCCCCCCCEEEECCCCHHHHHHHCCCCCCHHHHCEEEEEECCCCCEECCEEEEEEECCCC
FSPLAVARG
CCCCCCCCC
>Mature Secondary Structure
MKTALVTGATAGFGLAICKLLIQSGYKVIGTGRRKERLDELHSQLGNNFLPLAFDVSDDA
CCCEEEECCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCH
ATTQALNNRPAGWQAVDLLVNNAGLALGLEPAYKTDLKDWYQMIDTNIKGLVTVTRLILP
HHHHHHCCCCCCHHEEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EMVERNSGHIINLGSIAGNYPYPGGNVYGGTKAFVKQFSLNLRADLAGTKVRVTNVEPGL
HHHHCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEECCCCC
CGGTEFSNVRFKGDDDKAAKVYENVNYVAPEDIANIVLWLNQQPEHVNINRIEVMPTAQT
CCCCCCCCEEEECCCCHHHHHHHCCCCCCHHHHCEEEEEECCCCCEECCEEEEEEECCCC
FSPLAVARG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]