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The map label for this gene is ycgN [C]

Identifier: 126207951

GI number: 126207951

Start: 538989

End: 539435

Strand: Direct

Name: ycgN [C]

Synonym: APL_0467

Alternate gene names: 126207951

Gene position: 538989-539435 (Clockwise)

Preceding gene: 126207949

Following gene: 126207952

Centisome position: 23.7

GC content: 38.93

Gene sequence:

>447_bases
ATGACGAACCAATTAACCCCGAACTTTTGGCAAACAAAAAGCCTACTTGAAATGAATGATGCCGAATGGGAAGCATTGTG
TGACGGTTGTGGAAAATGTTGTTACCGCAAATATATTCAAGGCAGAGGAAAGCGAGAGCGTTTGTATTATACTTCGGTCG
CTTGTAATTTACTGGACGTGGATAACGGACGTTGTACCAATTATCCGAATCGTTTCAAAATTGAACGGGATTGTACCAAA
TTAACCAAGAAAAATTTGCCTGATTTCGGTTGGTTGCCGAAAACTTGTGCTTATCGTTTACTTTATGAAGGTAAGCCGTT
ATTTGATTGGCATCCGTTGATCTCTAACGATCCGCAATCGGTAAAAAAAGCGAATATTCTCATTCCAAACGGCATTCACG
AAAAAGATGTGATAGATTGGTTTGAATTTGTGATTGATGAGGTTTAA

Upstream 100 bases:

>100_bases
CAAAAAAATAAGCGCAAACGTTTGCTTTTTTAAAACCCCGCTAGAATATGCTAAAATACATTTAAAATAAAGAACTGTAA
CGGCTATTTAACAAAAAAAG

Downstream 100 bases:

>100_bases
GCTAACAAGCGGTTGTATTTTGTGAAAAATTTGCAAAATATGACCGCTTGTTATTTATATGATTTAAAAATGATAAGAGG
ACAAACACAATGAAAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTNQLTPNFWQTKSLLEMNDAEWEALCDGCGKCCYRKYIQGRGKRERLYYTSVACNLLDVDNGRCTNYPNRFKIERDCTK
LTKKNLPDFGWLPKTCAYRLLYEGKPLFDWHPLISNDPQSVKKANILIPNGIHEKDVIDWFEFVIDEV

Sequences:

>Translated_148_residues
MTNQLTPNFWQTKSLLEMNDAEWEALCDGCGKCCYRKYIQGRGKRERLYYTSVACNLLDVDNGRCTNYPNRFKIERDCTK
LTKKNLPDFGWLPKTCAYRLLYEGKPLFDWHPLISNDPQSVKKANILIPNGIHEKDVIDWFEFVIDEV
>Mature_147_residues
TNQLTPNFWQTKSLLEMNDAEWEALCDGCGKCCYRKYIQGRGKRERLYYTSVACNLLDVDNGRCTNYPNRFKIERDCTKL
TKKNLPDFGWLPKTCAYRLLYEGKPLFDWHPLISNDPQSVKKANILIPNGIHEKDVIDWFEFVIDEV

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=140, Percent_Identity=47.1428571428571, Blast_Score=142, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 17391; Mature: 17260

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQLTPNFWQTKSLLEMNDAEWEALCDGCGKCCYRKYIQGRGKRERLYYTSVACNLLDV
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHEEEEEC
DNGRCTNYPNRFKIERDCTKLTKKNLPDFGWLPKTCAYRLLYEGKPLFDWHPLISNDPQS
CCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
VKKANILIPNGIHEKDVIDWFEFVIDEV
HHHCCEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNQLTPNFWQTKSLLEMNDAEWEALCDGCGKCCYRKYIQGRGKRERLYYTSVACNLLDV
CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHEEEEEC
DNGRCTNYPNRFKIERDCTKLTKKNLPDFGWLPKTCAYRLLYEGKPLFDWHPLISNDPQS
CCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
VKKANILIPNGIHEKDVIDWFEFVIDEV
HHHCCEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]