Click here to switch to the map view.

The map label for this gene is sanA [H]

Identifier: 126207926

GI number: 126207926

Start: 499069

End: 499758

Strand: Direct

Name: sanA [H]

Synonym: APL_0442

Alternate gene names: 126207926

Gene position: 499069-499758 (Clockwise)

Preceding gene: 126207924

Following gene: 126207927

Centisome position: 21.94

GC content: 32.46

Gene sequence:

>690_bases
ATGGAATTAACTCAAGCAACAGAAAGTTTGCCAAAGACGTCTTTATGGAAAAGGTGTCTTTCAATCTGCCCTCGTATTGC
GTTAGTCAGCTTTGCAATAGTGTTTCTTTTAAGTATTACTGTTTTTGTTATTGATTATGCGACGGGTATTTATGTAAAAG
ATAATATTTATACCGATATTGAAAAATTACCGAAACATCGAAATGCCGTTGTTTTAGGGACATCGAAATTTTATGCAAAG
GGTACACCGAATTTATATTATAAATATCGTTTAGAAGCGGCAGTTCAATTAATTAATAAAGGTAAAGCAAAGAAGTTATT
AGTCAGTGGGGATAATAAAACACCTTATTATAACGAGCCGAAAGTAATGTTAAACGACTTATATAATATGGGCATTCCGA
AAAATATGATTGAACAGGATTTTGCAGGATATCGTACTTTAGATTCAATAGTCAGGGCAAGTAAGGTCTATAAATTAGAG
CCTTTTATTATTGTTTCTCAGCAATTTCATTGTGAACGAGCATTATTTATTGCGAAATATCATAATATTAATGCAGTTTG
TTTTGCGGCTAAATATCCGGAAGGACATATTAAAGTCAGATTAAGAGAATTTTTGGCAAGAATCGGTATGATTTGGGATT
TCCTAGTTTGGACCAAGCCGGAAACATTAGATAAAGTAAAATCGAAATAG

Upstream 100 bases:

>100_bases
ATTTTTTGAACCTTTCAGAACTTATGTAGTCTATCGGTGGTCAAATTAACAAATACTTAAAATTAGACCGCTTGTTCTTA
ATGAAACAAATGGGAATCGA

Downstream 100 bases:

>100_bases
AGATAAAAGTACTAAATTCAGGTTCTCATTTAAATGGTGTGAACAAATATATTTAATATTGTTATTATTTTTTAAGCTGA
TTCATTTTGAATCGGCTTTT

Product: SanA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MELTQATESLPKTSLWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAK
GTPNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYKLE
PFIIVSQQFHCERALFIAKYHNINAVCFAAKYPEGHIKVRLREFLARIGMIWDFLVWTKPETLDKVKSK

Sequences:

>Translated_229_residues
MELTQATESLPKTSLWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAK
GTPNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYKLE
PFIIVSQQFHCERALFIAKYHNINAVCFAAKYPEGHIKVRLREFLARIGMIWDFLVWTKPETLDKVKSK
>Mature_229_residues
MELTQATESLPKTSLWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDIEKLPKHRNAVVLGTSKFYAK
GTPNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEPKVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYKLE
PFIIVSQQFHCERALFIAKYHNINAVCFAAKYPEGHIKVRLREFLARIGMIWDFLVWTKPETLDKVKSK

Specific function: Participates in the barrier function of the cell envelope [H]

COG id: COG2949

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788466, Length=164, Percent_Identity=46.9512195121951, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI1789468, Length=200, Percent_Identity=34.5, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 26389; Mature: 26389

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTQATESLPKTSLWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDI
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHH
EKLPKHRNAVVLGTSKFYAKGTPNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEP
HHCCCCCCEEEEECCCEEECCCCCEEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
KVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYKLEPFIIVSQQFHCERALFIAKY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHEE
HNINAVCFAAKYPEGHIKVRLREFLARIGMIWDFLVWTKPETLDKVKSK
CCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MELTQATESLPKTSLWKRCLSICPRIALVSFAIVFLLSITVFVIDYATGIYVKDNIYTDI
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHH
EKLPKHRNAVVLGTSKFYAKGTPNLYYKYRLEAAVQLINKGKAKKLLVSGDNKTPYYNEP
HHCCCCCCEEEEECCCEEECCCCCEEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
KVMLNDLYNMGIPKNMIEQDFAGYRTLDSIVRASKVYKLEPFIIVSQQFHCERALFIAKY
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEECCCHHHHHHHHHHEE
HNINAVCFAAKYPEGHIKVRLREFLARIGMIWDFLVWTKPETLDKVKSK
CCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]