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The map label for this gene is rseA [H]

Identifier: 126207879

GI number: 126207879

Start: 449684

End: 450307

Strand: Direct

Name: rseA [H]

Synonym: APL_0395

Alternate gene names: 126207879

Gene position: 449684-450307 (Clockwise)

Preceding gene: 126207878

Following gene: 126207880

Centisome position: 19.77

GC content: 41.83

Gene sequence:

>624_bases
ATGCAACAAAATGAAACCCTTTCCGCTTTTATGGACGGGAAAAAAGTTGATGATGCGTTCATCGACGAGTTATGCGAAAG
TCCCGAATTAAAGCAAAAATGGGCAAGATACCATGCCGTAAGTAGTGTTTTGCACGGTGATGAGATTATTCTTGGTCGTG
ATTTTTCAGCAAAAATGGAAGCGTTACTGGAAAATGAAGAAATCGAATCTCAGCCGTCCGTTCAGGAAACTACGACTGCT
CCTCAGGGTAAATTAATCAAATTAAAACGCTGGAGTATGCCGCTTATGCAAGCGGGTATCGCCGCATCGGTGTGCTTGGT
TGCGGTGCTCGGCGTAAATATGATGAATGAGAAAAACGAACTTGCACAAGCGAGCCAACCCGTATTACAGACACAGCCGT
TTAGCGATTCGGTTCAACCGGTAAGCTATAATGCACCGAGCAAAGATGTCGCGACTCTCGATAAATTAGAAAGTCAGCAA
CACAAAATCAATGCGTTATTACAAGCTCAACAGTTACAAAGTAAACTGGATGTCGAAGCGATGAATACGTCTAAAGAGAA
AGAACAAAAAGAAAAGGCTCAAACATCATCGACCGATAAAAAATCAGAGTTAGAAAAGAATTAA

Upstream 100 bases:

>100_bases
GTCGGTACGGTTCGTTCGCGTATCTTTAGAGCAAGAGAAGCGATTGATGCAAAGGTCAATCCGCTAATGCAACAGATTTA
AGATTCAATCGGAGTTTATT

Downstream 100 bases:

>100_bases
CGAGCTTATAAAATAGTCGAATGAATTTGTTGTTGTAATAAATTAAATCTACTAACGAAGAAAGCGGTAAGATTTAGCGA
ATTTTTTGAGAAAATTTGCT

Product: putative sigma-E factor negative regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MQQNETLSAFMDGKKVDDAFIDELCESPELKQKWARYHAVSSVLHGDEIILGRDFSAKMEALLENEEIESQPSVQETTTA
PQGKLIKLKRWSMPLMQAGIAASVCLVAVLGVNMMNEKNELAQASQPVLQTQPFSDSVQPVSYNAPSKDVATLDKLESQQ
HKINALLQAQQLQSKLDVEAMNTSKEKEQKEKAQTSSTDKKSELEKN

Sequences:

>Translated_207_residues
MQQNETLSAFMDGKKVDDAFIDELCESPELKQKWARYHAVSSVLHGDEIILGRDFSAKMEALLENEEIESQPSVQETTTA
PQGKLIKLKRWSMPLMQAGIAASVCLVAVLGVNMMNEKNELAQASQPVLQTQPFSDSVQPVSYNAPSKDVATLDKLESQQ
HKINALLQAQQLQSKLDVEAMNTSKEKEQKEKAQTSSTDKKSELEKN
>Mature_207_residues
MQQNETLSAFMDGKKVDDAFIDELCESPELKQKWARYHAVSSVLHGDEIILGRDFSAKMEALLENEEIESQPSVQETTTA
PQGKLIKLKRWSMPLMQAGIAASVCLVAVLGVNMMNEKNELAQASQPVLQTQPFSDSVQPVSYNAPSKDVATLDKLESQQ
HKINALLQAQQLQSKLDVEAMNTSKEKEQKEKAQTSSTDKKSELEKN

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=192, Percent_Identity=32.2916666666667, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 23021; Mature: 23021

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQNETLSAFMDGKKVDDAFIDELCESPELKQKWARYHAVSSVLHGDEIILGRDFSAKME
CCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH
ALLENEEIESQPSVQETTTAPQGKLIKLKRWSMPLMQAGIAASVCLVAVLGVNMMNEKNE
HHHHHHHHCCCCCCHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
LAQASQPVLQTQPFSDSVQPVSYNAPSKDVATLDKLESQQHKINALLQAQQLQSKLDVEA
HHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MNTSKEKEQKEKAQTSSTDKKSELEKN
HCCHHHHHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure
MQQNETLSAFMDGKKVDDAFIDELCESPELKQKWARYHAVSSVLHGDEIILGRDFSAKME
CCCCHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHH
ALLENEEIESQPSVQETTTAPQGKLIKLKRWSMPLMQAGIAASVCLVAVLGVNMMNEKNE
HHHHHHHHCCCCCCHHHCCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
LAQASQPVLQTQPFSDSVQPVSYNAPSKDVATLDKLESQQHKINALLQAQQLQSKLDVEA
HHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MNTSKEKEQKEKAQTSSTDKKSELEKN
HCCHHHHHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]