| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is impA [C]
Identifier: 126207844
GI number: 126207844
Start: 401808
End: 402263
Strand: Reverse
Name: impA [C]
Synonym: APL_0360
Alternate gene names: 126207844
Gene position: 402263-401808 (Counterclockwise)
Preceding gene: 126207845
Following gene: 126207841
Centisome position: 17.69
GC content: 38.38
Gene sequence:
>456_bases ATGGCTTCAATTCGACCGCTTACCCGTGAGTTACCATATCAACCGTTACCGATGTACCGAGATATGAATAGTGAACGTTC AATCAAATTAGATCTGAATTCACTTTGTATTAAACGTCCGACCGAAACTTTTTTCATTCAAGTGAAAAACCCGAATTTAA TCGCTTGGGGAATCGAGTTGGACGATTTACTTATCGTTGAGCAATCCGAACAATATTTAGTTAATGATCTGATTGTGATT GAGAAAAATGGAGAATATAAGTTTTATCAATTTTTTAACGAAATTGAGAATAGCGTAGGAACTCGAGAAATCATTCTTTT CTCACTGGATGTCAGAGAACCTAATTTACGCATTACCGACTGGCAGGAAATTGAGATTGCAGGCGTGATCACGAATGTAG TACACCAAATGCGCCATAAATCCGCACAAACGGCAGCAAGAAAATATGCGGCATAG
Upstream 100 bases:
>100_bases ACTGGATATTTTTACAAAAAATAGTAGAAACAGGATTGACACTGTTTTTTTAATCAGTAAAATCACCTGTATAAACACAC AGTTTTAGAGGATGTAAAAA
Downstream 100 bases:
>100_bases AAAAAAGTCGTCAAATAACCTCTTTGACGACTTTTCATATAAACGTAATTAGAGAACGCGACGAGATTGCGTATAATTTC TCGCCCAATAACGTTCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MASIRPLTRELPYQPLPMYRDMNSERSIKLDLNSLCIKRPTETFFIQVKNPNLIAWGIELDDLLIVEQSEQYLVNDLIVI EKNGEYKFYQFFNEIENSVGTREIILFSLDVREPNLRITDWQEIEIAGVITNVVHQMRHKSAQTAARKYAA
Sequences:
>Translated_151_residues MASIRPLTRELPYQPLPMYRDMNSERSIKLDLNSLCIKRPTETFFIQVKNPNLIAWGIELDDLLIVEQSEQYLVNDLIVI EKNGEYKFYQFFNEIENSVGTREIILFSLDVREPNLRITDWQEIEIAGVITNVVHQMRHKSAQTAARKYAA >Mature_150_residues ASIRPLTRELPYQPLPMYRDMNSERSIKLDLNSLCIKRPTETFFIQVKNPNLIAWGIELDDLLIVEQSEQYLVNDLIVIE KNGEYKFYQFFNEIENSVGTREIILFSLDVREPNLRITDWQEIEIAGVITNVVHQMRHKSAQTAARKYAA
Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]
COG id: COG1974
COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S24 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019759 - InterPro: IPR015927 - InterPro: IPR011056 [H]
Pfam domain/function: PF00717 Peptidase_S24 [H]
EC number: 3.4.21.- [C]
Molecular weight: Translated: 17675; Mature: 17543
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIRPLTRELPYQPLPMYRDMNSERSIKLDLNSLCIKRPTETFFIQVKNPNLIAWGIEL CCCCCCCHHHCCCCCCCHHCCCCCCCEEEEEHHHEEECCCCCEEEEEECCCCEEEEECCC DDLLIVEQSEQYLVNDLIVIEKNGEYKFYQFFNEIENSVGTREIILFSLDVREPNLRITD CEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECC WQEIEIAGVITNVVHQMRHKSAQTAARKYAA CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASIRPLTRELPYQPLPMYRDMNSERSIKLDLNSLCIKRPTETFFIQVKNPNLIAWGIEL CCCCCCHHHCCCCCCCHHCCCCCCCEEEEEHHHEEECCCCCEEEEEECCCCEEEEECCC DDLLIVEQSEQYLVNDLIVIEKNGEYKFYQFFNEIENSVGTREIILFSLDVREPNLRITD CEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEECC WQEIEIAGVITNVVHQMRHKSAQTAARKYAA CCEEEHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]