Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is menC [H]
Identifier: 126207837
GI number: 126207837
Start: 395906
End: 396868
Strand: Direct
Name: menC [H]
Synonym: APL_0353
Alternate gene names: 126207837
Gene position: 395906-396868 (Clockwise)
Preceding gene: 126207834
Following gene: 126207838
Centisome position: 17.41
GC content: 46.0
Gene sequence:
>963_bases ATGAGAAAAGCCGAACTTTACCGCTATGCGATTCCTTGTCAAACCGGCGTGGTATTACGCAAGCAACCGCTCATTCAACG AGAAGGGCTGATTCTTAAACTGGAAGAAAACGGCAAAATCGGCTTAGGCGAAATTGCTCCCTTGCCCGGTTTTAGTCAAG AAACATTAGCCGATGCGGAAATGCAAGCGAAGATGTGGTTAGCGAATCAAACCGATGATTTGGAAGAATTATTTCCTTCG GTTGCGTTTGGTATTAGTTGTGCATTGGCTGAATTGCGTAATGAATTGATTACTCAGGGAAAGTTTGCTTCGGCAATTTT ATGCGACGGTAATTTTACGCAGTTTGCGCAAAAAATCGCACGAATTCCGCAGCCGCTCGGCAAAATCAAAATCGGCTTCG AGCCGGAAAAGGAAGGCGAGTTGGCAAATAGGTTGTTGGAACAATTCCCACATCTTACCTTGCGTTTGGATGCCAATCGC AGTTTTTCGTTGGCGCAAGCGGTCGGATTTGGTAAAAAAATTGCAAAATCGAACCGCTTGCGTATCCAATTTATTGAAGA ACCCTGTTTTACCCCCTCGTTCTCTCGTCAATTCGCACAAGCAACCGGTATTGCGATAGCGTGGGATGAAAGCGTACGTG AAGCGGGATTCAACGTAAAAGCGGAAGATTATTTGAAAGCGATAGTGATTAAACCGACCCTTACCGGCTCGCTTGCCAAA TGTGTGAATTTAATCAAGCAGGCACATACGCAAGGATTGAAAGCGGTTATCAGTTCTAGCCTTGAAAGCAGTTTGGGATT ATCGCAGTTGGCAAGAATTGCCGCACAATACACACCGGAAACGGTAGCGGGGCTAGACACGCTCGGCTTAATGCAAGTGC AGCTGGTTCGAGCGTGGCAGGGGGCGGATTTACCTTTAGCGGGATTACAAAGTCGGTTTTTGCAAAAAATTGCTGAAATT TGA
Upstream 100 bases:
>100_bases AATATTCTTTTAATTTTAGCTTAAACGGGCTTTTTTTTCCAGTTTCAATTATATGCGGCAAGCGGTAGAATTTAGGCAAA ATTTTACAAACGGACAGAAA
Downstream 100 bases:
>100_bases CCGCTTGTTTTATATAAGTTAAGACCGGCTTAGTGTTATTTTTTCAACACGGTTTGAATTAACAGCAAAATTGCCGCCGC ATCATCAACCAAACCGAGCG
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRKAELYRYAIPCQTGVVLRKQPLIQREGLILKLEENGKIGLGEIAPLPGFSQETLADAEMQAKMWLANQTDDLEELFPS VAFGISCALAELRNELITQGKFASAILCDGNFTQFAQKIARIPQPLGKIKIGFEPEKEGELANRLLEQFPHLTLRLDANR SFSLAQAVGFGKKIAKSNRLRIQFIEEPCFTPSFSRQFAQATGIAIAWDESVREAGFNVKAEDYLKAIVIKPTLTGSLAK CVNLIKQAHTQGLKAVISSSLESSLGLSQLARIAAQYTPETVAGLDTLGLMQVQLVRAWQGADLPLAGLQSRFLQKIAEI
Sequences:
>Translated_320_residues MRKAELYRYAIPCQTGVVLRKQPLIQREGLILKLEENGKIGLGEIAPLPGFSQETLADAEMQAKMWLANQTDDLEELFPS VAFGISCALAELRNELITQGKFASAILCDGNFTQFAQKIARIPQPLGKIKIGFEPEKEGELANRLLEQFPHLTLRLDANR SFSLAQAVGFGKKIAKSNRLRIQFIEEPCFTPSFSRQFAQATGIAIAWDESVREAGFNVKAEDYLKAIVIKPTLTGSLAK CVNLIKQAHTQGLKAVISSSLESSLGLSQLARIAAQYTPETVAGLDTLGLMQVQLVRAWQGADLPLAGLQSRFLQKIAEI >Mature_320_residues MRKAELYRYAIPCQTGVVLRKQPLIQREGLILKLEENGKIGLGEIAPLPGFSQETLADAEMQAKMWLANQTDDLEELFPS VAFGISCALAELRNELITQGKFASAILCDGNFTQFAQKIARIPQPLGKIKIGFEPEKEGELANRLLEQFPHLTLRLDANR SFSLAQAVGFGKKIAKSNRLRIQFIEEPCFTPSFSRQFAQATGIAIAWDESVREAGFNVKAEDYLKAIVIKPTLTGSLAK CVNLIKQAHTQGLKAVISSSLESSLGLSQLARIAAQYTPETVAGLDTLGLMQVQLVRAWQGADLPLAGLQSRFLQKIAEI
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=310, Percent_Identity=50.9677419354839, Blast_Score=290, Evalue=9e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 35141; Mature: 35141
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKAELYRYAIPCQTGVVLRKQPLIQREGLILKLEENGKIGLGEIAPLPGFSQETLADAE CCCCHHEEEECCCCCCEEECCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH MQAKMWLANQTDDLEELFPSVAFGISCALAELRNELITQGKFASAILCDGNFTQFAQKIA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH RIPQPLGKIKIGFEPEKEGELANRLLEQFPHLTLRLDANRSFSLAQAVGFGKKIAKSNRL HCCCCHHCEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCE RIQFIEEPCFTPSFSRQFAQATGIAIAWDESVREAGFNVKAEDYLKAIVIKPTLTGSLAK EEEEECCCCCCCHHHHHHHHHCCEEEEECHHHHHCCCCCCHHHHHEEEEECCCCCHHHHH CVNLIKQAHTQGLKAVISSSLESSLGLSQLARIAAQYTPETVAGLDTLGLMQVQLVRAWQ HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GADLPLAGLQSRFLQKIAEI CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRKAELYRYAIPCQTGVVLRKQPLIQREGLILKLEENGKIGLGEIAPLPGFSQETLADAE CCCCHHEEEECCCCCCEEECCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHH MQAKMWLANQTDDLEELFPSVAFGISCALAELRNELITQGKFASAILCDGNFTQFAQKIA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH RIPQPLGKIKIGFEPEKEGELANRLLEQFPHLTLRLDANRSFSLAQAVGFGKKIAKSNRL HCCCCHHCEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCE RIQFIEEPCFTPSFSRQFAQATGIAIAWDESVREAGFNVKAEDYLKAIVIKPTLTGSLAK EEEEECCCCCCCHHHHHHHHHCCEEEEECHHHHHCCCCCCHHHHHEEEEECCCCCHHHHH CVNLIKQAHTQGLKAVISSSLESSLGLSQLARIAAQYTPETVAGLDTLGLMQVQLVRAWQ HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GADLPLAGLQSRFLQKIAEI CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA