Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is glgP [H]
Identifier: 126207834
GI number: 126207834
Start: 390609
End: 393113
Strand: Direct
Name: glgP [H]
Synonym: APL_0350
Alternate gene names: 126207834
Gene position: 390609-393113 (Clockwise)
Preceding gene: 126207833
Following gene: 126207837
Centisome position: 17.17
GC content: 43.59
Gene sequence:
>2505_bases ATGGGCAATAAGGCTTTAAGTCCGGAGAATATTCAACAAGTTAAAGACGCTATTTTATATAAAATGGTGTTTGCGTTAGG GGTCGAGCCGCGTGAAGCGAGTAAACGTAACTGGCTGAATGCAGCATTACGTGTCGTACGTGATCTCTCGACCGAATCAT GGTTACAAACTCGCCGCAGTCAAGTGGCGAACGGTAGTCGTCGCGTATATTATCTTTCAATGGAATTCTTAATGGGACGT ACTTTCTCCAATGCGATGATTGCGGAAGGCGTATATGAGTTGATTGACGCGGCGTTAAAAGAACTCGGTCAAAATTTGGA AGATATTATTAACGAAGAGGGTGATCCGGGTTTAGGTAACGGCGGTTTAGGTCGTTTAGCGGCTTGTTATATGGACAGCC TTGCTGCAATGAAAATTCCGGCGATCGGTTACGGTATTCGTTACGAATACGGTATGTTCCGCCAAGAAATTCGTAACGGC GAGCAGGTAGAACAGCCGGATCAATGGTTGGAAAACGAATTTGCGTGGCCGTATTTACGTTCCAGTAAACGTTTCCCGAT TCGTTTCGGCGGACGAGTATGGAATGAAGGTTCAAAAGTCGTATGGCAACCGGACGAAGAAATTGTTGCCCAAGCACACG ATCAATTGATTCCGGGTTTCGAAACTACCGCAACCAATAGTTTACGTTTATGGTCTGCGCATGCTTCAGGTAAGGGGTTC GGTTTAGCGGACTTTAACCGCGGTGATTATTTCTCTGCAATGAGCCACCAGAATCTTTCAGAGAATGTCTCTCGCGTACT TTATCCGGACGATTCAACTTATAACGGACGTGAATTACGTTTACGCCAAGAGTATTTCCTCTGTTCCGCTTCCGTGCAGG ATATTATCCGTCGCCATGAAACGGAATGCGGTTCTTGTGTTAATTTAGTCGATAAAGTGGCGATTCATTTAAACGATACT CACCCGACCCTTGCCGTGCCGGAACTCATGCGTATTCTGATTGATGAAAAAGGTTATAGCTGGGAGCAAGCGTGGAGTAT GACGCGCAAAATTTTCTACTATACCAATCATACGCTAATGAGCGAAGCATTAGAAACATGGCCGGTAGAAATGTTAGGGC GTATTTTACCTCGTCATTTAGGCATTATTTTTGAGATCAACGAATGGTTCTTAAACGAAGTACGTGAAAAATTCCCGGGC GATGAAGATTTGGTGCAACGTGTATCATTAATTGATGAACACGGTGATCGCAGAGTACGTATGGCCTGGGTGGCGGTAGT CGCTTCAACCAAAGTAAACGGTGTAGCGAAAATTCACTCGGATTTAATGGTCGAATCCATTTTTGCCGACTTCGCGCGTA TTTATCCGGATCGTTTTACTAACGTAACAAACGGGGTAACGCCTCGCCGTTGGTTAAGAATTGCCAACCCAGGCTTAGCG AATATCTTGGATAAACGTATCGGTACGAATTGGCTGACAAACCTGAGCGAATTAGAAAAATTCAACGTATTTATCGATGA TGCGGACGTCCAAGCCGAAGTTGCGGCGGTAAAATATGAGAACAAACGTAAATTAGCGGAGTATGTTGAGAAAAACTTAG GGATTACGCTTAACCCTGAAGCGATTTTTGACGTACAAGTAAAACGTATTCATAAATATAAACGCCAACAGCTAAACGTA TTACACATTATTACGTTATATAACCGTATCTTAAAAAATCCGAATGCGGATTGGACGCCTCGTGTGTTTATCTTTGCCGG TAAAGCGGCAAGTGCTTATTATGCCGCGAAGAAAGTGATTCGTTTAATTAATGATGTCGCAAATGTCATCAATAATGATG AACGTATTCGCGATTTAATTAAGGTAGTATTTATTCCGAACTACGGCGTATCACTGGCGCAAATGATTATTCCGGCGGCG GACGTTTCAGAGCAAATTTCATTGGCGGGTACCGAGGCATCGGGTACTTCGAATATGAAATTCGCACTTAACGGCGCTTT AACTATCGGCACGTTAGACGGTGCGAACGTAGAAATTCTTGATTGTGTCGGTAAAGATAATATCTTTATTTTCGGTAATA CGGTTGAGCAAGTGGAAGAATTGCGTCGTAACGGCTACTCGCCGTATCATTATTATGAAACGGACGGGGAGTTAAACGAA GCGGTTTCACAAATCTTAAACGGTAAATTCTCGCCGGATGATCCGTATCGTTATCAAGATCTGATTCTCAATTCGGGCGA CTATTACCAAGCTTGTGCGGATTTCCGCAGCTATGTGGAAGCGCAGGAAAAAGTCGCGGCGGCTTATCGTAATAAGAAAG CTTGGACGCGTTCGGCAATTATCAATATTGCGAATATGGGTTATTTCTCATCGGATCGTTCGGTGCTGGATTACGCTCGT GATATTTGGCATATTGAACCGATGGACGAATTACAGCTTAAAGATAATGCCGATCTCAAAAGCATTCTTGAAAGTTCGAA TAAACTGTTAGGTTCTCGTAAATAG
Upstream 100 bases:
>100_bases CATTGGCTCAAGATTTCGGCTGGGCGAGAGCGGCGGCTTCATATCAGGCGATTTATCAAGAAATCGTATAACGGATTTTA TTTATATTTAGGAGTGACAA
Downstream 100 bases:
>100_bases CAGAAATTTAAGCGGTCTGTTTTTCGTAAGATTTTGCAAGAAACGGACCGCTTGTATTAGCGATAAAAAAGCCGTTTGTG TAAGACAAACGGCTTTCTTT
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MGNKALSPENIQQVKDAILYKMVFALGVEPREASKRNWLNAALRVVRDLSTESWLQTRRSQVANGSRRVYYLSMEFLMGR TFSNAMIAEGVYELIDAALKELGQNLEDIINEEGDPGLGNGGLGRLAACYMDSLAAMKIPAIGYGIRYEYGMFRQEIRNG EQVEQPDQWLENEFAWPYLRSSKRFPIRFGGRVWNEGSKVVWQPDEEIVAQAHDQLIPGFETTATNSLRLWSAHASGKGF GLADFNRGDYFSAMSHQNLSENVSRVLYPDDSTYNGRELRLRQEYFLCSASVQDIIRRHETECGSCVNLVDKVAIHLNDT HPTLAVPELMRILIDEKGYSWEQAWSMTRKIFYYTNHTLMSEALETWPVEMLGRILPRHLGIIFEINEWFLNEVREKFPG DEDLVQRVSLIDEHGDRRVRMAWVAVVASTKVNGVAKIHSDLMVESIFADFARIYPDRFTNVTNGVTPRRWLRIANPGLA NILDKRIGTNWLTNLSELEKFNVFIDDADVQAEVAAVKYENKRKLAEYVEKNLGITLNPEAIFDVQVKRIHKYKRQQLNV LHIITLYNRILKNPNADWTPRVFIFAGKAASAYYAAKKVIRLINDVANVINNDERIRDLIKVVFIPNYGVSLAQMIIPAA DVSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEILDCVGKDNIFIFGNTVEQVEELRRNGYSPYHYYETDGELNE AVSQILNGKFSPDDPYRYQDLILNSGDYYQACADFRSYVEAQEKVAAAYRNKKAWTRSAIINIANMGYFSSDRSVLDYAR DIWHIEPMDELQLKDNADLKSILESSNKLLGSRK
Sequences:
>Translated_834_residues MGNKALSPENIQQVKDAILYKMVFALGVEPREASKRNWLNAALRVVRDLSTESWLQTRRSQVANGSRRVYYLSMEFLMGR TFSNAMIAEGVYELIDAALKELGQNLEDIINEEGDPGLGNGGLGRLAACYMDSLAAMKIPAIGYGIRYEYGMFRQEIRNG EQVEQPDQWLENEFAWPYLRSSKRFPIRFGGRVWNEGSKVVWQPDEEIVAQAHDQLIPGFETTATNSLRLWSAHASGKGF GLADFNRGDYFSAMSHQNLSENVSRVLYPDDSTYNGRELRLRQEYFLCSASVQDIIRRHETECGSCVNLVDKVAIHLNDT HPTLAVPELMRILIDEKGYSWEQAWSMTRKIFYYTNHTLMSEALETWPVEMLGRILPRHLGIIFEINEWFLNEVREKFPG DEDLVQRVSLIDEHGDRRVRMAWVAVVASTKVNGVAKIHSDLMVESIFADFARIYPDRFTNVTNGVTPRRWLRIANPGLA NILDKRIGTNWLTNLSELEKFNVFIDDADVQAEVAAVKYENKRKLAEYVEKNLGITLNPEAIFDVQVKRIHKYKRQQLNV LHIITLYNRILKNPNADWTPRVFIFAGKAASAYYAAKKVIRLINDVANVINNDERIRDLIKVVFIPNYGVSLAQMIIPAA DVSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEILDCVGKDNIFIFGNTVEQVEELRRNGYSPYHYYETDGELNE AVSQILNGKFSPDDPYRYQDLILNSGDYYQACADFRSYVEAQEKVAAAYRNKKAWTRSAIINIANMGYFSSDRSVLDYAR DIWHIEPMDELQLKDNADLKSILESSNKLLGSRK >Mature_833_residues GNKALSPENIQQVKDAILYKMVFALGVEPREASKRNWLNAALRVVRDLSTESWLQTRRSQVANGSRRVYYLSMEFLMGRT FSNAMIAEGVYELIDAALKELGQNLEDIINEEGDPGLGNGGLGRLAACYMDSLAAMKIPAIGYGIRYEYGMFRQEIRNGE QVEQPDQWLENEFAWPYLRSSKRFPIRFGGRVWNEGSKVVWQPDEEIVAQAHDQLIPGFETTATNSLRLWSAHASGKGFG LADFNRGDYFSAMSHQNLSENVSRVLYPDDSTYNGRELRLRQEYFLCSASVQDIIRRHETECGSCVNLVDKVAIHLNDTH PTLAVPELMRILIDEKGYSWEQAWSMTRKIFYYTNHTLMSEALETWPVEMLGRILPRHLGIIFEINEWFLNEVREKFPGD EDLVQRVSLIDEHGDRRVRMAWVAVVASTKVNGVAKIHSDLMVESIFADFARIYPDRFTNVTNGVTPRRWLRIANPGLAN ILDKRIGTNWLTNLSELEKFNVFIDDADVQAEVAAVKYENKRKLAEYVEKNLGITLNPEAIFDVQVKRIHKYKRQQLNVL HIITLYNRILKNPNADWTPRVFIFAGKAASAYYAAKKVIRLINDVANVINNDERIRDLIKVVFIPNYGVSLAQMIIPAAD VSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEILDCVGKDNIFIFGNTVEQVEELRRNGYSPYHYYETDGELNEA VSQILNGKFSPDDPYRYQDLILNSGDYYQACADFRSYVEAQEKVAAAYRNKKAWTRSAIINIANMGYFSSDRSVLDYARD IWHIEPMDELQLKDNADLKSILESSNKLLGSRK
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=835, Percent_Identity=46.9461077844311, Blast_Score=753, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=809, Percent_Identity=46.8479604449938, Blast_Score=751, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=810, Percent_Identity=47.1604938271605, Blast_Score=745, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=717, Percent_Identity=48.2566248256625, Blast_Score=705, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=663, Percent_Identity=48.1146304675716, Blast_Score=662, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=802, Percent_Identity=61.7206982543641, Blast_Score=1025, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=792, Percent_Identity=46.5909090909091, Blast_Score=723, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=814, Percent_Identity=48.034398034398, Blast_Score=788, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=814, Percent_Identity=48.034398034398, Blast_Score=788, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=811, Percent_Identity=45.8692971639951, Blast_Score=684, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=808, Percent_Identity=48.6386138613861, Blast_Score=778, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=808, Percent_Identity=48.6386138613861, Blast_Score=778, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94955; Mature: 94824
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKALSPENIQQVKDAILYKMVFALGVEPREASKRNWLNAALRVVRDLSTESWLQTRRS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QVANGSRRVYYLSMEFLMGRTFSNAMIAEGVYELIDAALKELGQNLEDIINEEGDPGLGN HHCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC GGLGRLAACYMDSLAAMKIPAIGYGIRYEYGMFRQEIRNGEQVEQPDQWLENEFAWPYLR CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHH SSKRFPIRFGGRVWNEGSKVVWQPDEEIVAQAHDQLIPGFETTATNSLRLWSAHASGKGF CCCCCCEEECCEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC GLADFNRGDYFSAMSHQNLSENVSRVLYPDDSTYNGRELRLRQEYFLCSASVQDIIRRHE CCCCCCCCCHHHHHHCCCHHHHHHEEECCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHC TECGSCVNLVDKVAIHLNDTHPTLAVPELMRILIDEKGYSWEQAWSMTRKIFYYTNHTLM CCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECHHHH SEALETWPVEMLGRILPRHLGIIFEINEWFLNEVREKFPGDEDLVQRVSLIDEHGDRRVR HHHHHHCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEH MAWVAVVASTKVNGVAKIHSDLMVESIFADFARIYPDRFTNVTNGVTPRRWLRIANPGLA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHEEECCCCHH NILDKRIGTNWLTNLSELEKFNVFIDDADVQAEVAAVKYENKRKLAEYVEKNLGITLNPE HHHHHHHCCHHHHCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC AIFDVQVKRIHKYKRQQLNVLHIITLYNRILKNPNADWTPRVFIFAGKAASAYYAAKKVI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHH RLINDVANVINNDERIRDLIKVVFIPNYGVSLAQMIIPAADVSEQISLAGTEASGTSNMK HHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHEECCCCCCCCCCEE FALNGALTIGTLDGANVEILDCVGKDNIFIFGNTVEQVEELRRNGYSPYHYYETDGELNE EEEECEEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHHH AVSQILNGKFSPDDPYRYQDLILNSGDYYQACADFRSYVEAQEKVAAAYRNKKAWTRSAI HHHHHHCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH INIANMGYFSSDRSVLDYARDIWHIEPMDELQLKDNADLKSILESSNKLLGSRK HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure GNKALSPENIQQVKDAILYKMVFALGVEPREASKRNWLNAALRVVRDLSTESWLQTRRS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QVANGSRRVYYLSMEFLMGRTFSNAMIAEGVYELIDAALKELGQNLEDIINEEGDPGLGN HHCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCC GGLGRLAACYMDSLAAMKIPAIGYGIRYEYGMFRQEIRNGEQVEQPDQWLENEFAWPYLR CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHH SSKRFPIRFGGRVWNEGSKVVWQPDEEIVAQAHDQLIPGFETTATNSLRLWSAHASGKGF CCCCCCEEECCEEECCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC GLADFNRGDYFSAMSHQNLSENVSRVLYPDDSTYNGRELRLRQEYFLCSASVQDIIRRHE CCCCCCCCCHHHHHHCCCHHHHHHEEECCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHC TECGSCVNLVDKVAIHLNDTHPTLAVPELMRILIDEKGYSWEQAWSMTRKIFYYTNHTLM CCHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECHHHH SEALETWPVEMLGRILPRHLGIIFEINEWFLNEVREKFPGDEDLVQRVSLIDEHGDRRVR HHHHHHCCHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEH MAWVAVVASTKVNGVAKIHSDLMVESIFADFARIYPDRFTNVTNGVTPRRWLRIANPGLA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHEEECCCCHH NILDKRIGTNWLTNLSELEKFNVFIDDADVQAEVAAVKYENKRKLAEYVEKNLGITLNPE HHHHHHHCCHHHHCHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCC AIFDVQVKRIHKYKRQQLNVLHIITLYNRILKNPNADWTPRVFIFAGKAASAYYAAKKVI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHH RLINDVANVINNDERIRDLIKVVFIPNYGVSLAQMIIPAADVSEQISLAGTEASGTSNMK HHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHEECCCCCCCCCCEE FALNGALTIGTLDGANVEILDCVGKDNIFIFGNTVEQVEELRRNGYSPYHYYETDGELNE EEEECEEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEECCCCHHHH AVSQILNGKFSPDDPYRYQDLILNSGDYYQACADFRSYVEAQEKVAAAYRNKKAWTRSAI HHHHHHCCCCCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH INIANMGYFSSDRSVLDYARDIWHIEPMDELQLKDNADLKSILESSNKLLGSRK HHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]