Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is yxjG [H]
Identifier: 126207803
GI number: 126207803
Start: 355682
End: 356770
Strand: Direct
Name: yxjG [H]
Synonym: APL_0319
Alternate gene names: 126207803
Gene position: 355682-356770 (Clockwise)
Preceding gene: 126207802
Following gene: 126207807
Centisome position: 15.64
GC content: 43.16
Gene sequence:
>1089_bases ATGGCAGCAAAAAATTTACCTTTTCATGCGGATACGGTCGGTTCGTATTTAAGAACGGATGCGTGGAAAAAAGCACATGC GGATTATAAAGCCGGCACGATTTCACTTGAAGCGCGCGATGCGATTGTTGAAGAAGAAGTAAAAAAATTAGTACAAGCAC AATTAGATGCCGGTATTCAAGTGGTAACAGACGGTGAGTTCCATCGTTCTTGGTGGCACATCGATTTCTTAGAGAATTTA AACGGTATCGAAGGTTATGTACCGGAGAAAGCGTATGCGTTTAAAGGCGTAGCGGTACGTCCGTACAACACGCGTTGTTG CGGTAAAGTTTCTTGGAATCCGAATCATCCGTTCCTTGAGCATTTCAAAAAATTTAATGCGATTGTCGCCGGTAGAGCGG TAGCAAAATTTACTATTCCAAGCCCGAACCAATTAATGTATCCGGTGCAATGGGATCACGGTATCTATGCAACCCGTGAA GAATTTGCCAAAGATGTACAACAGGCTTATAAAGATGCGATTAAAGCGTTCTATGATGCGGGGTGTCGCTATTTACAGAT TGATGACGTATATTGGGGATCACTCTGCAACAATTACCAACAACCGACCTTTGAAGCGGATAAAGCGCAAGCGGTTGCCA ATATTCAAGCGATTTTAGCGGACAAACCGGCTGATTTAACCATCACGACTCACGTTTGTCGCGGTAACTATAAATCTTCT TATTTATTAGAAGGCGCTTATGACCCGATTGCGGACGGTTTATTCGGTCAAACCAATTATGACGGTTACTTCTTAGAATA TGATGATGAACGTTCAGGCGGTTTCGAGCCGTTAAAACATTTTGCGAATAATAAAGGTCGCGTGGTGTTAGGTTTAATCA GTTCTAAATTCCCGGAATTGGAAGATAAAGAAGCGATTAAAGCACGTATCGCTGAAGCGGCGAAATATGTACCGCTTGAA CAGCTTTGTTTAAGCCCACAATGCGGTTTTGCTTCAACCGAAGAAGGCAATGTGATGACCGAAGAGCAGCAATGGGCAAA AGTGCGTCACGTTGAAGAAATTGCGAAAGAAGTGTGGGGCGAAGATTAA
Upstream 100 bases:
>100_bases TCGAAAAAGTTTCACATTAATTTGAATGATTTCCCTTGAGTGATGCAGTTCGTTCGCTTACGATAACTGCGAAATATCAC ATTAACGGAGTACCCTAGTT
Downstream 100 bases:
>100_bases TTTCATTTAGTCTGAATAACGAGATAAAAGTGAATTAGGTGCAACCCTAATTCATTTTTTTGTTACTTAAGCGAAGTTAT TTTAAACGTGAAAAGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MAAKNLPFHADTVGSYLRTDAWKKAHADYKAGTISLEARDAIVEEEVKKLVQAQLDAGIQVVTDGEFHRSWWHIDFLENL NGIEGYVPEKAYAFKGVAVRPYNTRCCGKVSWNPNHPFLEHFKKFNAIVAGRAVAKFTIPSPNQLMYPVQWDHGIYATRE EFAKDVQQAYKDAIKAFYDAGCRYLQIDDVYWGSLCNNYQQPTFEADKAQAVANIQAILADKPADLTITTHVCRGNYKSS YLLEGAYDPIADGLFGQTNYDGYFLEYDDERSGGFEPLKHFANNKGRVVLGLISSKFPELEDKEAIKARIAEAAKYVPLE QLCLSPQCGFASTEEGNVMTEEQQWAKVRHVEEIAKEVWGED
Sequences:
>Translated_362_residues MAAKNLPFHADTVGSYLRTDAWKKAHADYKAGTISLEARDAIVEEEVKKLVQAQLDAGIQVVTDGEFHRSWWHIDFLENL NGIEGYVPEKAYAFKGVAVRPYNTRCCGKVSWNPNHPFLEHFKKFNAIVAGRAVAKFTIPSPNQLMYPVQWDHGIYATRE EFAKDVQQAYKDAIKAFYDAGCRYLQIDDVYWGSLCNNYQQPTFEADKAQAVANIQAILADKPADLTITTHVCRGNYKSS YLLEGAYDPIADGLFGQTNYDGYFLEYDDERSGGFEPLKHFANNKGRVVLGLISSKFPELEDKEAIKARIAEAAKYVPLE QLCLSPQCGFASTEEGNVMTEEQQWAKVRHVEEIAKEVWGED >Mature_361_residues AAKNLPFHADTVGSYLRTDAWKKAHADYKAGTISLEARDAIVEEEVKKLVQAQLDAGIQVVTDGEFHRSWWHIDFLENLN GIEGYVPEKAYAFKGVAVRPYNTRCCGKVSWNPNHPFLEHFKKFNAIVAGRAVAKFTIPSPNQLMYPVQWDHGIYATREE FAKDVQQAYKDAIKAFYDAGCRYLQIDDVYWGSLCNNYQQPTFEADKAQAVANIQAILADKPADLTITTHVCRGNYKSSY LLEGAYDPIADGLFGQTNYDGYFLEYDDERSGGFEPLKHFANNKGRVVLGLISSKFPELEDKEAIKARIAEAAKYVPLEQ LCLSPQCGFASTEEGNVMTEEQQWAKVRHVEEIAKEVWGED
Specific function: Unknown
COG id: COG0620
COG function: function code E; Methionine synthase II (cobalamin-independent)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxjH [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002629 [H]
Pfam domain/function: PF01717 Meth_synt_2 [H]
EC number: NA
Molecular weight: Translated: 40846; Mature: 40715
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKNLPFHADTVGSYLRTDAWKKAHADYKAGTISLEARDAIVEEEVKKLVQAQLDAGIQ CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEE VVTDGEFHRSWWHIDFLENLNGIEGYVPEKAYAFKGVAVRPYNTRCCGKVSWNPNHPFLE EEECCCHHHHEEEEEHHHCCCCCCCCCCCCHHEECCEEECCCCCCCCEECCCCCCCHHHH HFKKFNAIVAGRAVAKFTIPSPNQLMYPVQWDHGIYATREEFAKDVQQAYKDAIKAFYDA HHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC GCRYLQIDDVYWGSLCNNYQQPTFEADKAQAVANIQAILADKPADLTITTHVCRGNYKSS CCEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC YLLEGAYDPIADGLFGQTNYDGYFLEYDDERSGGFEPLKHFANNKGRVVLGLISSKFPEL EEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC EDKEAIKARIAEAAKYVPLEQLCLSPQCGFASTEEGNVMTEEQQWAKVRHVEEIAKEVWG CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCC ED CC >Mature Secondary Structure AAKNLPFHADTVGSYLRTDAWKKAHADYKAGTISLEARDAIVEEEVKKLVQAQLDAGIQ CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEE VVTDGEFHRSWWHIDFLENLNGIEGYVPEKAYAFKGVAVRPYNTRCCGKVSWNPNHPFLE EEECCCHHHHEEEEEHHHCCCCCCCCCCCCHHEECCEEECCCCCCCCEECCCCCCCHHHH HFKKFNAIVAGRAVAKFTIPSPNQLMYPVQWDHGIYATREEFAKDVQQAYKDAIKAFYDA HHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC GCRYLQIDDVYWGSLCNNYQQPTFEADKAQAVANIQAILADKPADLTITTHVCRGNYKSS CCEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC YLLEGAYDPIADGLFGQTNYDGYFLEYDDERSGGFEPLKHFANNKGRVVLGLISSKFPEL EEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCC EDKEAIKARIAEAAKYVPLEQLCLSPQCGFASTEEGNVMTEEQQWAKVRHVEEIAKEVWG CHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCC ED CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377; 10568751 [H]