Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
---|---|
Accession | NC_009053 |
Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is djlA [H]
Identifier: 126207790
GI number: 126207790
Start: 338438
End: 339298
Strand: Direct
Name: djlA [H]
Synonym: APL_0306
Alternate gene names: 126207790
Gene position: 338438-339298 (Clockwise)
Preceding gene: 126207789
Following gene: 126207791
Centisome position: 14.88
GC content: 43.32
Gene sequence:
>861_bases ATGCAATTTATTGGAAAAATTATCGGTTTTTTTATCGGGTATAAGTTGTTCGGCGGTATTTTCGGCGGTTTACTCGGCGT ATTTATCGGACATTTGGCGGATAAGAAACTTTATGAATTAGGTTCGGTTCGTTCGTCAATTTTCGGTAAGAATTTGACTC GTCAATCCTTATTTACCCAAACGACCTTTGCGGTATTAGGGCATATTGCGAAAGCAAAAGGCAGAGTAACGGAAGACGAT ATTCATTTGGCTCGTTTGCTTATGGCTCGCCTTAAATTGGATGCGAATGCACAGCAACTCGCTCAACAAGCGTTTACACT GGGTAAAGAAGCGGATTTCCCGTTACGCCAAGTTATTCAAGAGTTTAGAGAGGCTTGCGGTCAGCGTGCCGATTTATTGC GTTTCTTTGTCGAAGTACAAATGCAAGCGGCGTTACAAGACGGGCAGTTAGATTCAAATGAACAGCAGATTCTATTTACC ATTGCCGAAACAATGGGGATGAGCCGTTTCCAATTCGAGCAAATGATCGCAATGGTGATGGCGGCGCAACAATTCCGTTC CGGCGGTTTTTATCAACAATCTCAACAACAAAGCGGTTCATATCATCAATCTCAGGGCAATTACGGCGGCTACCGCCCAA GCGGTCCGAATGTTAAAGATGCCTACACGGTATTAGGTGTGACGGAAAACGATGATCAAAATACGGTTAAACGTGCGTAT CGTAAGTTAATGAACGAACATCACCCGGATAAATTGGCGGCGAAAGGTTTACCGGATGAAATGATGGAATTAGCGAAAGA AAAAGCACAGCAAATTCAGGCGGCTTACGATTTGATTTGTAAGACGAAAGGTTGGAAATAA
Upstream 100 bases:
>100_bases CGAACAAAGAGAAAGATTTAATTATTTTTTCAGCTTTTTAAGCTAAAATATTATCACTTGTAGTGAATATTCTTTTTATG AATGGAAATTAAGGAATCAT
Downstream 100 bases:
>100_bases TAAAAACATCTCAAGCGGTCGTTTTTGGTAAAAATTTTGCAAAAATCGACCGCTTACTTTTTGAATCGAATAAGTAAAAA TTGAATGATAAATAATATAC
Product: Dna-J like membrane chaperone protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MQFIGKIIGFFIGYKLFGGIFGGLLGVFIGHLADKKLYELGSVRSSIFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEDD IHLARLLMARLKLDANAQQLAQQAFTLGKEADFPLRQVIQEFREACGQRADLLRFFVEVQMQAALQDGQLDSNEQQILFT IAETMGMSRFQFEQMIAMVMAAQQFRSGGFYQQSQQQSGSYHQSQGNYGGYRPSGPNVKDAYTVLGVTENDDQNTVKRAY RKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYDLICKTKGWK
Sequences:
>Translated_286_residues MQFIGKIIGFFIGYKLFGGIFGGLLGVFIGHLADKKLYELGSVRSSIFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEDD IHLARLLMARLKLDANAQQLAQQAFTLGKEADFPLRQVIQEFREACGQRADLLRFFVEVQMQAALQDGQLDSNEQQILFT IAETMGMSRFQFEQMIAMVMAAQQFRSGGFYQQSQQQSGSYHQSQGNYGGYRPSGPNVKDAYTVLGVTENDDQNTVKRAY RKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYDLICKTKGWK >Mature_286_residues MQFIGKIIGFFIGYKLFGGIFGGLLGVFIGHLADKKLYELGSVRSSIFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEDD IHLARLLMARLKLDANAQQLAQQAFTLGKEADFPLRQVIQEFREACGQRADLLRFFVEVQMQAALQDGQLDSNEQQILFT IAETMGMSRFQFEQMIAMVMAAQQFRSGGFYQQSQQQSGSYHQSQGNYGGYRPSGPNVKDAYTVLGVTENDDQNTVKRAY RKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYDLICKTKGWK
Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig
COG id: COG1076
COG function: function code O; DnaJ-domain-containing proteins 1
Gene ontology:
Cell location: Cell inner membrane; Single-pass type III membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Escherichia coli, GI1786241, Length=286, Percent_Identity=48.2517482517483, Blast_Score=255, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 - InterPro: IPR007791 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]
EC number: NA
Molecular weight: Translated: 32126; Mature: 32126
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFIGKIIGFFIGYKLFGGIFGGLLGVFIGHLADKKLYELGSVRSSIFGKNLTRQSLFTQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TTFAVLGHIAKAKGRVTEDDIHLARLLMARLKLDANAQQLAQQAFTLGKEADFPLRQVIQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHH EFREACGQRADLLRFFVEVQMQAALQDGQLDSNEQQILFTIAETMGMSRFQFEQMIAMVM HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AAQQFRSGGFYQQSQQQSGSYHQSQGNYGGYRPSGPNVKDAYTVLGVTENDDQNTVKRAY HHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHH RKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYDLICKTKGWK HHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQFIGKIIGFFIGYKLFGGIFGGLLGVFIGHLADKKLYELGSVRSSIFGKNLTRQSLFTQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TTFAVLGHIAKAKGRVTEDDIHLARLLMARLKLDANAQQLAQQAFTLGKEADFPLRQVIQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHH EFREACGQRADLLRFFVEVQMQAALQDGQLDSNEQQILFTIAETMGMSRFQFEQMIAMVM HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AAQQFRSGGFYQQSQQQSGSYHQSQGNYGGYRPSGPNVKDAYTVLGVTENDDQNTVKRAY HHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCHHHHHHHH RKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYDLICKTKGWK HHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA