Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is 126207789
Identifier: 126207789
GI number: 126207789
Start: 337552
End: 338358
Strand: Direct
Name: 126207789
Synonym: APL_0305
Alternate gene names: NA
Gene position: 337552-338358 (Clockwise)
Preceding gene: 126207788
Following gene: 126207790
Centisome position: 14.84
GC content: 38.29
Gene sequence:
>807_bases ATGGCGCTTTTTATGCGTTTAGCCGGAGAACTGCCGTTAGCCGAGAAAGCGATTTTCCGTAACGCAATCACGGCATTGAT TAGCGGTTACATTATTTGGCGAAATAAACAATCGTTTTTAGGCCAAGCGGAAAACAGAACGTTATTATTACTGCGTTCTA TTACCGGATTGCTTGGTATTTTATGCGGCGTTTATATTATCGATCACTTAGTATTAAGCGATGTAGATATGATCGGTAAG CTCACTTCTTTTATTTTAATCGTCTTTTCAGCCGTTTTTCTAAAGGAAAAAGCTTCTTACGTACAATGGGGATTGTGTTT GTCGGCATTTGTCGGTGCGCTATTTATTATTAAACCGGCATTTGAGATAAAGTTTTTCCCTTATGTCATCGGGATAATCG GTGCGGTTTTTGCGGCATTGGCTTATCTTTGCTTACGTCTTCTCGGTAAAAGAGCTAAACCTGAAACCTCAAATACGATC GTTTTTTTCTTCTCCGCATTTTCCACTATCGTATTATTACCCTTTGTTTTTTTAGATTTCGTCCCCATAACTGCAATTCA ATTTAATTATTTACTATTATCCGGAATCACCGCAACCGTCGGACAGTTTTGTGTGACATTGGCATATAAATATGCGGCGG CTAAAGATATTTCCATTTATAGTTATGCTTCGGTATTATTCAGCGCGTTTCTTGGCGCAACTATATTTGAACAATTTCCG GACGGTTGGAGTGTTTTGGGCTATTTAATTATCTTTAGCTCAGGTTTTCTGATGTTTATGTTCACGCGAACAAAGAGAAA GATTTAA
Upstream 100 bases:
>100_bases ACATTTATCTGTAATTATAATGATAAATTTTTGGAATCATATTTCCCCGTTAATGAAGGGAATTATTTGTATTTTATTAT CGGCGTTAGGCTTTTCTCTG
Downstream 100 bases:
>100_bases TTATTTTTTCAGCTTTTTAAGCTAAAATATTATCACTTGTAGTGAATATTCTTTTTATGAATGGAAATTAAGGAATCATA TGCAATTTATTGGAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MALFMRLAGELPLAEKAIFRNAITALISGYIIWRNKQSFLGQAENRTLLLLRSITGLLGILCGVYIIDHLVLSDVDMIGK LTSFILIVFSAVFLKEKASYVQWGLCLSAFVGALFIIKPAFEIKFFPYVIGIIGAVFAALAYLCLRLLGKRAKPETSNTI VFFFSAFSTIVLLPFVFLDFVPITAIQFNYLLLSGITATVGQFCVTLAYKYAAAKDISIYSYASVLFSAFLGATIFEQFP DGWSVLGYLIIFSSGFLMFMFTRTKRKI
Sequences:
>Translated_268_residues MALFMRLAGELPLAEKAIFRNAITALISGYIIWRNKQSFLGQAENRTLLLLRSITGLLGILCGVYIIDHLVLSDVDMIGK LTSFILIVFSAVFLKEKASYVQWGLCLSAFVGALFIIKPAFEIKFFPYVIGIIGAVFAALAYLCLRLLGKRAKPETSNTI VFFFSAFSTIVLLPFVFLDFVPITAIQFNYLLLSGITATVGQFCVTLAYKYAAAKDISIYSYASVLFSAFLGATIFEQFP DGWSVLGYLIIFSSGFLMFMFTRTKRKI >Mature_267_residues ALFMRLAGELPLAEKAIFRNAITALISGYIIWRNKQSFLGQAENRTLLLLRSITGLLGILCGVYIIDHLVLSDVDMIGKL TSFILIVFSAVFLKEKASYVQWGLCLSAFVGALFIIKPAFEIKFFPYVIGIIGAVFAALAYLCLRLLGKRAKPETSNTIV FFFSAFSTIVLLPFVFLDFVPITAIQFNYLLLSGITATVGQFCVTLAYKYAAAKDISIYSYASVLFSAFLGATIFEQFPD GWSVLGYLIIFSSGFLMFMFTRTKRKI
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323909, Length=241, Percent_Identity=24.4813278008299, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29814; Mature: 29683
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFMRLAGELPLAEKAIFRNAITALISGYIIWRNKQSFLGQAENRTLLLLRSITGLLGI CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCCHHHHHHHHHHHHHH LCGVYIIDHLVLSDVDMIGKLTSFILIVFSAVFLKEKASYVQWGLCLSAFVGALFIIKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH FEIKFFPYVIGIIGAVFAALAYLCLRLLGKRAKPETSNTIVFFFSAFSTIVLLPFVFLDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH VPITAIQFNYLLLSGITATVGQFCVTLAYKYAAAKDISIYSYASVLFSAFLGATIFEQFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC DGWSVLGYLIIFSSGFLMFMFTRTKRKI CHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure ALFMRLAGELPLAEKAIFRNAITALISGYIIWRNKQSFLGQAENRTLLLLRSITGLLGI HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHCCCCCCHHHHHHHHHHHHHH LCGVYIIDHLVLSDVDMIGKLTSFILIVFSAVFLKEKASYVQWGLCLSAFVGALFIIKPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH FEIKFFPYVIGIIGAVFAALAYLCLRLLGKRAKPETSNTIVFFFSAFSTIVLLPFVFLDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH VPITAIQFNYLLLSGITATVGQFCVTLAYKYAAAKDISIYSYASVLFSAFLGATIFEQFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC DGWSVLGYLIIFSSGFLMFMFTRTKRKI CHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA