Click here to switch to the map view.

The map label for this gene is 126207708

Identifier: 126207708

GI number: 126207708

Start: 243658

End: 244332

Strand: Direct

Name: 126207708

Synonym: APL_0220

Alternate gene names: NA

Gene position: 243658-244332 (Clockwise)

Preceding gene: 126207707

Following gene: 126207709

Centisome position: 10.71

GC content: 41.78

Gene sequence:

>675_bases
ATGAAAAAATTACTTATGACTACGTTATGTGTTACGGCATTAGGTTTAGCAGGTTGTGCAACTGAAGGTTCTAGAGCTAT
TGCACCGACAGTAACACAAGCAGCCAGTACGGCTACAAATTATCACGGTGTAAAATCGGCTATTTCGGTTGGTAAGTTTG
ATAATAAATCTAGCTTCCAAAACGGCGTGTTTTCAGATGGGCAAGATCAGCTCGGTAATCAATCAAAAACTATTCTCGTT
TCTCACTTACAGCAAACCGGGCGTTTTTCAGTACTTGATCGAACCAATATGAGCGAAGCAGCCGCCGAAGCAAAAATTAA
AGGACAAAAACAAAACCTCAAAGGTGCGACTTATGTGATTACGGGGGATGTTACGGAATTTGGTCGTAAGACTGTCGGCG
ATCACCAATTATTCGGTATTTTAGGACGAGGCAAAGAGCAAGTCGCTTATGCGAAAGTGACTCTTAATGTTGTGAATGTA
AATACGTCGGAAGTGGTTTATTCGGTGCAAGGCGCAGGCGAATATAATCTATCGAATCGCGAAGTTTTAGGATTTGGCGG
CACTGCAGGTTATGACTCAACCTTAAATGGCAAAGTACTGGATTTAGCTATTCGAGAAGCGGTAAATAACTTAGTAAACG
GTATTGAAGCCGGACATTGGACTCCTGCTAAATAA

Upstream 100 bases:

>100_bases
TTGTTTATGTATAAGTAAAGTCAATTTTGTATGTTTTAAAAATATTCTTTACATGTTATAATTTGAACTGTGTTTTATTT
AAGCAAAAGGGAAGTTCTAA

Downstream 100 bases:

>100_bases
GGGACAGGCATGAAGAAAATAAACATAATAATGTTTGCTTTAATAACGGTAGTTTTATCCGCTTGTTCTTCAAGGTCTGT
CGATACCAATACATATTATT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKKLLMTTLCVTALGLAGCATEGSRAIAPTVTQAASTATNYHGVKSAISVGKFDNKSSFQNGVFSDGQDQLGNQSKTILV
SHLQQTGRFSVLDRTNMSEAAAEAKIKGQKQNLKGATYVITGDVTEFGRKTVGDHQLFGILGRGKEQVAYAKVTLNVVNV
NTSEVVYSVQGAGEYNLSNREVLGFGGTAGYDSTLNGKVLDLAIREAVNNLVNGIEAGHWTPAK

Sequences:

>Translated_224_residues
MKKLLMTTLCVTALGLAGCATEGSRAIAPTVTQAASTATNYHGVKSAISVGKFDNKSSFQNGVFSDGQDQLGNQSKTILV
SHLQQTGRFSVLDRTNMSEAAAEAKIKGQKQNLKGATYVITGDVTEFGRKTVGDHQLFGILGRGKEQVAYAKVTLNVVNV
NTSEVVYSVQGAGEYNLSNREVLGFGGTAGYDSTLNGKVLDLAIREAVNNLVNGIEAGHWTPAK
>Mature_224_residues
MKKLLMTTLCVTALGLAGCATEGSRAIAPTVTQAASTATNYHGVKSAISVGKFDNKSSFQNGVFSDGQDQLGNQSKTILV
SHLQQTGRFSVLDRTNMSEAAAEAKIKGQKQNLKGATYVITGDVTEFGRKTVGDHQLFGILGRGKEQVAYAKVTLNVVNV
NTSEVVYSVQGAGEYNLSNREVLGFGGTAGYDSTLNGKVLDLAIREAVNNLVNGIEAGHWTPAK

Specific function: Unknown

COG id: COG1462

COG function: function code M; Uncharacterized protein involved in formation of curli polymers

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005534
- InterPro:   IPR007195 [H]

Pfam domain/function: PF03783 CsgG [H]

EC number: NA

Molecular weight: Translated: 23645; Mature: 23645

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLMTTLCVTALGLAGCATEGSRAIAPTVTQAASTATNYHGVKSAISVGKFDNKSSFQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
NGVFSDGQDQLGNQSKTILVSHLQQTGRFSVLDRTNMSEAAAEAKIKGQKQNLKGATYVI
CCCCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEE
TGDVTEFGRKTVGDHQLFGILGRGKEQVAYAKVTLNVVNVNTSEVVYSVQGAGEYNLSNR
ECCHHHHHHHCCCCHHEEEECCCCCCCEEEEEEEEEEEECCHHHEEEEECCCCCCCCCCC
EVLGFGGTAGYDSTLNGKVLDLAIREAVNNLVNGIEAGHWTPAK
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKLLMTTLCVTALGLAGCATEGSRAIAPTVTQAASTATNYHGVKSAISVGKFDNKSSFQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
NGVFSDGQDQLGNQSKTILVSHLQQTGRFSVLDRTNMSEAAAEAKIKGQKQNLKGATYVI
CCCCCCCHHHHCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCEEEEE
TGDVTEFGRKTVGDHQLFGILGRGKEQVAYAKVTLNVVNVNTSEVVYSVQGAGEYNLSNR
ECCHHHHHHHCCCCHHEEEECCCCCCCEEEEEEEEEEEECCHHHEEEEECCCCCCCCCCC
EVLGFGGTAGYDSTLNGKVLDLAIREAVNNLVNGIEAGHWTPAK
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]