Click here to switch to the map view.

The map label for this gene is opsX [H]

Identifier: 126207674

GI number: 126207674

Start: 205638

End: 206684

Strand: Reverse

Name: opsX [H]

Synonym: APL_0186

Alternate gene names: 126207674

Gene position: 206684-205638 (Counterclockwise)

Preceding gene: 126207675

Following gene: 126207673

Centisome position: 9.09

GC content: 43.17

Gene sequence:

>1047_bases
ATGAAAAAACAACCGCTTAATATCTGTATTTTACGTCTGTCCGCCATTGGTGACGTATGCCACACTCTTGCCGTCGTACA
GGCGATTCAACGTCAATATCCCGACGCCAAAATCAGTTGGATTATCGGCAAAACCGAAGCAATGCTAATGCAAGGTTTGG
AAAATATCGAGCTGATTCCTTATGATAAAAAAACAGGCTGGAAAGGAATATTTACACTTTGGAAAACATTAGCCAACAAG
CGGTTCGATTTTTTGCTAAACATGCAAACCGCTTTTCGTGCCTCAATAATTTCGTTAGGTATTAAAGCGACGAAGAAAAT
CGGTTTTAATCGAGATCGCGCGCGTGAAATGCAATGGCTTTTTACTAATGAAAAAGTGGAAATGACCGCTTCTCCGCACG
TTTTGGACGGGCAAATGATGTTCGCCAAAGCAATCGGTGTAACCGATTTAACGCCTCGTTGGTCGCTACCTGTAAGTCAG
TCCGATCTGGATTACAGTGCCGCTTTTATTGATAAAAGCAAGAAAAACGTACTGATTGCGCCTTGTTCCAGTAAACAGGA
AAAAGATTGGGGAGCGGAACACAATGCGGAAATCGCCAAATGGCTTGCCGCACAAAATATCAATGTGCTTATTGCCGGCT
CGCCTTCCGCTTATGAAACGGAAACCGCAGCTAAAATTCAACAACTTACGCCGAATTGTATCAATATTGCCGGGAAAACC
AGCTTAAAACAGCTTGCCGCATTAATTAAGCAAGTTGATTTGGTTATCTCGCCGGATACCGGTGCGGCACATATTGCGAC
TACGCAAGGCACGCCGGTTATCGGCTTATATGCGATTCACAATCCTCGTCGTACTGCGCCTTATAATGATCGGCACAATG
TTGTTTCGGTTTATGATCAAGCGGTCTTAGATTATTACGGAAAACCGTGGTATGAACTGCCTTGGGCAACCAAAGCCAAG
AGTAAATCCGGCGAAAAATTAATGGAACGAATCTCTGTCGATGATGTGAAGAAAAAAATAGTTGAAACGCTTGCTGTAAA
ATTGTAA

Upstream 100 bases:

>100_bases
AAAAGTTGAATAAGCACTTTTTAATCAGACCGAACCCACGCAAAAGCGTGGGTTTTTACTATTCGATATCAATGAATTAC
TTTAAAGATCGCAAATTCTA

Downstream 100 bases:

>100_bases
AGTAACGCTGTATTTAAAATTTTACAGACAAGGAAATAAAAATGAACACCGTAGTTAATCAGGATAGTTTGCATAATGTG
AATATTGTTGATGAAAAAGT

Product: ADP-heptose:LPS heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKKQPLNICILRLSAIGDVCHTLAVVQAIQRQYPDAKISWIIGKTEAMLMQGLENIELIPYDKKTGWKGIFTLWKTLANK
RFDFLLNMQTAFRASIISLGIKATKKIGFNRDRAREMQWLFTNEKVEMTASPHVLDGQMMFAKAIGVTDLTPRWSLPVSQ
SDLDYSAAFIDKSKKNVLIAPCSSKQEKDWGAEHNAEIAKWLAAQNINVLIAGSPSAYETETAAKIQQLTPNCINIAGKT
SLKQLAALIKQVDLVISPDTGAAHIATTQGTPVIGLYAIHNPRRTAPYNDRHNVVSVYDQAVLDYYGKPWYELPWATKAK
SKSGEKLMERISVDDVKKKIVETLAVKL

Sequences:

>Translated_348_residues
MKKQPLNICILRLSAIGDVCHTLAVVQAIQRQYPDAKISWIIGKTEAMLMQGLENIELIPYDKKTGWKGIFTLWKTLANK
RFDFLLNMQTAFRASIISLGIKATKKIGFNRDRAREMQWLFTNEKVEMTASPHVLDGQMMFAKAIGVTDLTPRWSLPVSQ
SDLDYSAAFIDKSKKNVLIAPCSSKQEKDWGAEHNAEIAKWLAAQNINVLIAGSPSAYETETAAKIQQLTPNCINIAGKT
SLKQLAALIKQVDLVISPDTGAAHIATTQGTPVIGLYAIHNPRRTAPYNDRHNVVSVYDQAVLDYYGKPWYELPWATKAK
SKSGEKLMERISVDDVKKKIVETLAVKL
>Mature_348_residues
MKKQPLNICILRLSAIGDVCHTLAVVQAIQRQYPDAKISWIIGKTEAMLMQGLENIELIPYDKKTGWKGIFTLWKTLANK
RFDFLLNMQTAFRASIISLGIKATKKIGFNRDRAREMQWLFTNEKVEMTASPHVLDGQMMFAKAIGVTDLTPRWSLPVSQ
SDLDYSAAFIDKSKKNVLIAPCSSKQEKDWGAEHNAEIAKWLAAQNINVLIAGSPSAYETETAAKIQQLTPNCINIAGKT
SLKQLAALIKQVDLVISPDTGAAHIATTQGTPVIGLYAIHNPRRTAPYNDRHNVVSVYDQAVLDYYGKPWYELPWATKAK
SKSGEKLMERISVDDVKKKIVETLAVKL

Specific function: Heptose Transfer To The Lipopolysaccharide Core. It Transfers The Innnermost Heptose To [4'-P](3-Deoxy-D-Manno- Octulosonic Acid)2-IVa. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=325, Percent_Identity=23.3846153846154, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1790050, Length=312, Percent_Identity=24.0384615384615, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1790062, Length=286, Percent_Identity=22.027972027972, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38830; Mature: 38830

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQPLNICILRLSAIGDVCHTLAVVQAIQRQYPDAKISWIIGKTEAMLMQGLENIELIP
CCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCEEEE
YDKKTGWKGIFTLWKTLANKRFDFLLNMQTAFRASIISLGIKATKKIGFNRDRAREMQWL
CCCCCCCHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEE
FTNEKVEMTASPHVLDGQMMFAKAIGVTDLTPRWSLPVSQSDLDYSAAFIDKSKKNVLIA
EECCEEEEECCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE
PCSSKQEKDWGAEHNAEIAKWLAAQNINVLIAGSPSAYETETAAKIQQLTPNCINIAGKT
CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCH
SLKQLAALIKQVDLVISPDTGAAHIATTQGTPVIGLYAIHNPRRTAPYNDRHNVVSVYDQ
HHHHHHHHHHHHCEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
AVLDYYGKPWYELPWATKAKSKSGEKLMERISVDDVKKKIVETLAVKL
HHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKQPLNICILRLSAIGDVCHTLAVVQAIQRQYPDAKISWIIGKTEAMLMQGLENIELIP
CCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCEEEE
YDKKTGWKGIFTLWKTLANKRFDFLLNMQTAFRASIISLGIKATKKIGFNRDRAREMQWL
CCCCCCCHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEE
FTNEKVEMTASPHVLDGQMMFAKAIGVTDLTPRWSLPVSQSDLDYSAAFIDKSKKNVLIA
EECCEEEEECCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE
PCSSKQEKDWGAEHNAEIAKWLAAQNINVLIAGSPSAYETETAAKIQQLTPNCINIAGKT
CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCH
SLKQLAALIKQVDLVISPDTGAAHIATTQGTPVIGLYAIHNPRRTAPYNDRHNVVSVYDQ
HHHHHHHHHHHHCEEECCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
AVLDYYGKPWYELPWATKAKSKSGEKLMERISVDDVKKKIVETLAVKL
HHHHHCCCCCEECCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]