| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is pykA [H]
Identifier: 126207675
GI number: 126207675
Start: 206772
End: 208211
Strand: Reverse
Name: pykA [H]
Synonym: APL_0187
Alternate gene names: 126207675
Gene position: 208211-206772 (Counterclockwise)
Preceding gene: 126207679
Following gene: 126207674
Centisome position: 9.15
GC content: 43.96
Gene sequence:
>1440_bases ATGTCTAGAAAACTCAGAAGAACAAAAATTGTTTGTACAATGGGTCCAGCTACCGATCGTGGTAATAATTTAGAAAAAGT TATCGCTGCAGGTGCGAATATGGTTCGTATGAACTTCTCGCACGGTGTGCCGGAAGATCACATCGAACGTGCAAATAAAG TGCGTGAAATTGCAGCTAGATTAGGTAAAACCGTAGCGATTTTAGGCGATTTACAGGGGCCTAAAATTCGTGTTTCTACA TTCAAAGACGGTAAAATTTTCTTAAATATCGGTGACAAATTCACTTTAGATGCGGATTTACCGCGTGGTGAAGGTCATCA AGATGCGGTCGGCTTAGACTATAAAAACTTACCGAACGATGTCGTACCGGGTGATATTCTTTTATTAGATGACGGTAACG TACAATTAAAAGTTCTTTCGGTTGAAGGCGTGAAAGTGCATACGGAAGTGACTGTCGGTGGCCCGTTATCGAATAACAAA GGTATCAATAAGTTAGGCGGCGGTTTATCTGCACCGGCATTAACGGAAAAAGATAAAGAAGACATTAAACTTGCGGCTAA AATCGGTGTAGATTACTTAGCGGTATCATTCCCTCAATCAAGTGCGGATTTAGACTATGCGCGTCAATTGGCACGTGAAG CGGGATTAGAAGCGAAAATCGTGGCGAAAGTGGAACGTGCGGAAACCGTTGCAACCGAAGAAGCGATGGATGACATTATT TTAGGTTCTGACGTGGTAATGGTTGCACGTGGCGACTTAGGTGTTGAAATCGGTGATGCGGCGTTAGTCGGCGTACAAAA ACGTTTAATTCGTCGTGCTCGTAAATTAAACCGCGTAGTCATTACCGCTACCCAAATGATGGAATCGATGATCAAAAAAC CGATGCCGACACGTGCCGAAGTTATGGACGTAGCGAATGCGGTATTAGACGGTACGGATGCGGTAATGCTTTCCGGTGAA ACGGCAAACGGCGATTATCCGGTTGAAACGGTTAAATCAATGGCGGAAGTCTGTTTAGGTGCGGAAACGATGCCGAGCAT CAACATCTCTCGTCACCGTATGGAAGGTACATTCGCAACGATTGATGAAGCGGTTGCTATGTCTGCGATGTACACCGCTA ACCACTTGGAAGGCGTATCTGCGCTTATCGCTTTAACCCACTCGGGCGAAACGGCGAAATTAATGAGTCGTATCAGTTCA GGTTTACCGATTTATGCGTTATCTCGTAATCAACAAGCATTAAATCGTACCGCGCTTTATCGCGGCGTAACACCGGTATT CTATGATGAAGAAAGCCGTACTTTCGAAGGTGCGAAAAAAGCTATCGCTCTATTAAAAGAGAAAGGCTATTTAATGTCCG GCGATTTAGTATTATTAACTCAAGGTGACGAGTTAAAAGAAGGCGGTACGAACACCAGCCGTTTATTAAAAGTTGAATAA
Upstream 100 bases:
>100_bases ACGATTTAAGCGTATAATACTCTGCGTTTAAGGCGTTAAAATACCGCCGATGAAAAGAATTTTCAATTTCTAAATAATCA ATAATTACGGAGTCTAATCA
Downstream 100 bases:
>100_bases GCACTTTTTAATCAGACCGAACCCACGCAAAAGCGTGGGTTTTTACTATTCGATATCAATGAATTACTTTAAAGATCGCA AATTCTAATGAAAAAACAAC
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSRKLRRTKIVCTMGPATDRGNNLEKVIAAGANMVRMNFSHGVPEDHIERANKVREIAARLGKTVAILGDLQGPKIRVST FKDGKIFLNIGDKFTLDADLPRGEGHQDAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLSVEGVKVHTEVTVGGPLSNNK GINKLGGGLSAPALTEKDKEDIKLAAKIGVDYLAVSFPQSSADLDYARQLAREAGLEAKIVAKVERAETVATEEAMDDII LGSDVVMVARGDLGVEIGDAALVGVQKRLIRRARKLNRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGE TANGDYPVETVKSMAEVCLGAETMPSINISRHRMEGTFATIDEAVAMSAMYTANHLEGVSALIALTHSGETAKLMSRISS GLPIYALSRNQQALNRTALYRGVTPVFYDEESRTFEGAKKAIALLKEKGYLMSGDLVLLTQGDELKEGGTNTSRLLKVE
Sequences:
>Translated_479_residues MSRKLRRTKIVCTMGPATDRGNNLEKVIAAGANMVRMNFSHGVPEDHIERANKVREIAARLGKTVAILGDLQGPKIRVST FKDGKIFLNIGDKFTLDADLPRGEGHQDAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLSVEGVKVHTEVTVGGPLSNNK GINKLGGGLSAPALTEKDKEDIKLAAKIGVDYLAVSFPQSSADLDYARQLAREAGLEAKIVAKVERAETVATEEAMDDII LGSDVVMVARGDLGVEIGDAALVGVQKRLIRRARKLNRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGE TANGDYPVETVKSMAEVCLGAETMPSINISRHRMEGTFATIDEAVAMSAMYTANHLEGVSALIALTHSGETAKLMSRISS GLPIYALSRNQQALNRTALYRGVTPVFYDEESRTFEGAKKAIALLKEKGYLMSGDLVLLTQGDELKEGGTNTSRLLKVE >Mature_478_residues SRKLRRTKIVCTMGPATDRGNNLEKVIAAGANMVRMNFSHGVPEDHIERANKVREIAARLGKTVAILGDLQGPKIRVSTF KDGKIFLNIGDKFTLDADLPRGEGHQDAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLSVEGVKVHTEVTVGGPLSNNKG INKLGGGLSAPALTEKDKEDIKLAAKIGVDYLAVSFPQSSADLDYARQLAREAGLEAKIVAKVERAETVATEEAMDDIIL GSDVVMVARGDLGVEIGDAALVGVQKRLIRRARKLNRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGET ANGDYPVETVKSMAEVCLGAETMPSINISRHRMEGTFATIDEAVAMSAMYTANHLEGVSALIALTHSGETAKLMSRISSG LPIYALSRNQQALNRTALYRGVTPVFYDEESRTFEGAKKAIALLKEKGYLMSGDLVLLTQGDELKEGGTNTSRLLKVE
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=494, Percent_Identity=37.246963562753, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI33286420, Length=494, Percent_Identity=37.246963562753, Blast_Score=271, Evalue=1e-72, Organism=Homo sapiens, GI33286418, Length=494, Percent_Identity=36.8421052631579, Blast_Score=266, Evalue=4e-71, Organism=Homo sapiens, GI10835121, Length=498, Percent_Identity=35.5421686746988, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI32967597, Length=498, Percent_Identity=35.5421686746988, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI310128732, Length=291, Percent_Identity=35.7388316151203, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI310128730, Length=291, Percent_Identity=35.7388316151203, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=34.5991561181435, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=34.5991561181435, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI310128738, Length=216, Percent_Identity=33.7962962962963, Blast_Score=99, Evalue=6e-21, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=74.5833333333333, Blast_Score=724, Evalue=0.0, Organism=Escherichia coli, GI1787965, Length=475, Percent_Identity=38.1052631578947, Blast_Score=293, Evalue=1e-80, Organism=Caenorhabditis elegans, GI17544584, Length=490, Percent_Identity=38.1632653061225, Blast_Score=285, Evalue=4e-77, Organism=Caenorhabditis elegans, GI17506831, Length=493, Percent_Identity=37.1196754563895, Blast_Score=247, Evalue=9e-66, Organism=Caenorhabditis elegans, GI71984406, Length=493, Percent_Identity=37.1196754563895, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17506829, Length=493, Percent_Identity=37.1196754563895, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71984413, Length=493, Percent_Identity=37.1196754563895, Blast_Score=246, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6319279, Length=489, Percent_Identity=37.2188139059305, Blast_Score=259, Evalue=5e-70, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=33.8775510204082, Blast_Score=243, Evalue=3e-65, Organism=Drosophila melanogaster, GI24648964, Length=497, Percent_Identity=38.2293762575453, Blast_Score=280, Evalue=1e-75, Organism=Drosophila melanogaster, GI28571814, Length=497, Percent_Identity=38.2293762575453, Blast_Score=280, Evalue=2e-75, Organism=Drosophila melanogaster, GI24648966, Length=411, Percent_Identity=37.956204379562, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24581235, Length=493, Percent_Identity=31.8458417849899, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI24646914, Length=283, Percent_Identity=34.982332155477, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51513; Mature: 51382
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKLRRTKIVCTMGPATDRGNNLEKVIAAGANMVRMNFSHGVPEDHIERANKVREIAAR CCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH LGKTVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPRGEGHQDAVGLDYKNLPND HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCHHCCCCC VVPGDILLLDDGNVQLKVLSVEGVKVHTEVTVGGPLSNNKGINKLGGGLSAPALTEKDKE CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHH DIKLAAKIGVDYLAVSFPQSSADLDYARQLAREAGLEAKIVAKVERAETVATEEAMDDII HHEEHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHE LGSDVVMVARGDLGVEIGDAALVGVQKRLIRRARKLNRVVITATQMMESMIKKPMPTRAE ECCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHCCCCCHHH VMDVANAVLDGTDAVMLSGETANGDYPVETVKSMAEVCLGAETMPSINISRHRMEGTFAT HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHH IDEAVAMSAMYTANHLEGVSALIALTHSGETAKLMSRISSGLPIYALSRNQQALNRTALY HHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHH RGVTPVFYDEESRTFEGAKKAIALLKEKGYLMSGDLVLLTQGDELKEGGTNTSRLLKVE HCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCEEEEECCCHHHCCCCCCCEEEEEC >Mature Secondary Structure SRKLRRTKIVCTMGPATDRGNNLEKVIAAGANMVRMNFSHGVPEDHIERANKVREIAAR CCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH LGKTVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPRGEGHQDAVGLDYKNLPND HCCEEEEEECCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCCCHHCCCCC VVPGDILLLDDGNVQLKVLSVEGVKVHTEVTVGGPLSNNKGINKLGGGLSAPALTEKDKE CCCCCEEEEECCCEEEEEEEECCEEEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCHH DIKLAAKIGVDYLAVSFPQSSADLDYARQLAREAGLEAKIVAKVERAETVATEEAMDDII HHEEHHHHCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHE LGSDVVMVARGDLGVEIGDAALVGVQKRLIRRARKLNRVVITATQMMESMIKKPMPTRAE ECCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHCCCCCHHH VMDVANAVLDGTDAVMLSGETANGDYPVETVKSMAEVCLGAETMPSINISRHRMEGTFAT HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHH IDEAVAMSAMYTANHLEGVSALIALTHSGETAKLMSRISSGLPIYALSRNQQALNRTALY HHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHH RGVTPVFYDEESRTFEGAKKAIALLKEKGYLMSGDLVLLTQGDELKEGGTNTSRLLKVE HCCCCEEECCCCCHHHHHHHHHHHHHHCCCEEECCEEEEECCCHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]