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The map label for this gene is 126207613

Identifier: 126207613

GI number: 126207613

Start: 141986

End: 142360

Strand: Reverse

Name: 126207613

Synonym: APL_0125

Alternate gene names: NA

Gene position: 142360-141986 (Counterclockwise)

Preceding gene: 126207614

Following gene: 126207612

Centisome position: 6.26

GC content: 35.73

Gene sequence:

>375_bases
ATGAAACAGTTAAAATCTTATTGGTCATTGGCAGTTTTTTCGCTTTTTTTAACCGCTTGCGGCAGTAATCCGCAAAGTTA
TATCAAAGGGAAATCCGCTCCGATTGTAAATGTTGAAGCTCAAATTGCGACACAGATTGAAATTGATGCGAAAAGTGAAA
AAGTTTCCGTTACGAATTTAACTGAGTATCCGCTTAACTTATCCTATAAATTGTTTTGGTATGATAATCAAGGCATTACA
CAAACCAATAACAATATATCGATGCAACCTTGGTTGAGTTTATGGCTAAATGGTAAACAGTCACAAACACTTTCACTTGA
AAAACCAACCGCTGAAAGCAGCAATTATCGTATCTATTTACGTGGTAACCGATGA

Upstream 100 bases:

>100_bases
ATTGTGAACTGTAACGTACACGGCGGTCAGGAAGTATTCCATATCCATATGCATTTAGTCGGCGGCGAGCCTTTAGGCAA
AATGTTAAACAACAAATAGT

Downstream 100 bases:

>100_bases
ATGCACTTGATTGGCTTGAAAGCCAACAACAAGCGGTCGTTTTTTGCAAAAATTTAGCAGGTTTGACCGCTTGCAGCCAA
CAGATTCAGCTCGCCTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKQLKSYWSLAVFSLFLTACGSNPQSYIKGKSAPIVNVEAQIATQIEIDAKSEKVSVTNLTEYPLNLSYKLFWYDNQGIT
QTNNNISMQPWLSLWLNGKQSQTLSLEKPTAESSNYRIYLRGNR

Sequences:

>Translated_124_residues
MKQLKSYWSLAVFSLFLTACGSNPQSYIKGKSAPIVNVEAQIATQIEIDAKSEKVSVTNLTEYPLNLSYKLFWYDNQGIT
QTNNNISMQPWLSLWLNGKQSQTLSLEKPTAESSNYRIYLRGNR
>Mature_124_residues
MKQLKSYWSLAVFSLFLTACGSNPQSYIKGKSAPIVNVEAQIATQIEIDAKSEKVSVTNLTEYPLNLSYKLFWYDNQGIT
QTNNNISMQPWLSLWLNGKQSQTLSLEKPTAESSNYRIYLRGNR

Specific function: Unknown

COG id: COG5633

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010824 [H]

Pfam domain/function: PF07233 DUF1425 [H]

EC number: NA

Molecular weight: Translated: 14116; Mature: 14116

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLKSYWSLAVFSLFLTACGSNPQSYIKGKSAPIVNVEAQIATQIEIDAKSEKVSVTNL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEE
TEYPLNLSYKLFWYDNQGITQTNNNISMQPWLSLWLNGKQSQTLSLEKPTAESSNYRIYL
ECCCCCCEEEEEEECCCCCEECCCCEEECCEEEEEECCCCCCEEEEECCCCCCCCEEEEE
RGNR
EECC
>Mature Secondary Structure
MKQLKSYWSLAVFSLFLTACGSNPQSYIKGKSAPIVNVEAQIATQIEIDAKSEKVSVTNL
CCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEEEEEEEEEEECCCCEEEEEEE
TEYPLNLSYKLFWYDNQGITQTNNNISMQPWLSLWLNGKQSQTLSLEKPTAESSNYRIYL
ECCCCCCEEEEEEECCCCCEECCCCEEECCEEEEEECCCCCCEEEEECCCCCCCCEEEEE
RGNR
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]