| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175706
Identifier: 126175706
GI number: 126175706
Start: 4116322
End: 4117506
Strand: Direct
Name: 126175706
Synonym: Sbal_3509
Alternate gene names: NA
Gene position: 4116322-4117506 (Clockwise)
Preceding gene: 126175705
Following gene: 126175707
Centisome position: 80.28
GC content: 49.45
Gene sequence:
>1185_bases ATGAAAACACTCAGTATTGTATGGGCAGTGGTTGGGTTAATGCTGATCGGCGGCTGCGACCAAACGCCACAGGCTCAAAG CACTCAATCCAAATCCATGGCCAATGTGGTAGGCACAACCTCTGCTAATCAAGATGATTTAGCTTTTACGCCTATTGTTC CCGGCTATAAATTTGAATTTCCGCGGGATCACTTGGCGCACAATAACTTTCGCCAGGAATGGTGGTATCTGACCGCCAAT TTAACCACAGAAACAGGTGAGCAACTCGGTGCCCAGTGGACGCAGTTTAGAGTCGCCCTAAAACCCACAGATCTGCAAAC AATAGCTCCGCAAGTAACAGATGCAACACCCAAAAGTGAATCCACTTGGGCGACTCAGCAGCTTTATTTAGCTCATAGCG CATTAACCTCGAGTAATGCTCACCTCGCCCACGAAAAATGGTCACGCCGTCATAGCGAGTTTGCCGAAGTAAAATTGGAT CCCTATCAAATCCGCCTCGATAACTGGCACTGGCAGAGCGAAACCAATGCACTCTTTCCCGCCACCTTAACGGTGGAGAA TCCTGATTTTAGCTACCAACTTAAGCTTAACAGCCAAGCGCCACTGCAATACCAAGGCGCTAACGGCTATAGCCTTAAAA GTCGCGATGGCCAAGTGGCCTCTTACTATTACAGTCAGCCCTTTATTGAAATCTCAGGTGAAATCAACCGCAATGGCAAA ATGGAGCGAGTCACAGGTCAAGGCTGGCTCGACAGGGAATGGAGCTCGCAATTTCTCACTAAAACGCAACAGGGTTGGGA TTGGTTCGCGCTCAGGTTAAACGATGGCTCGACGCTGATGTTGTTTCAGCTACGGGATCAGTCTCCAGCAGAGTCCGCAA AGAATGCGCCTATCTCGGCATTTTATAGCGCCAGAAGAATGTTTGCTGATGGCACGGGGCGCAACATCAATTCCACTGAC AATCCCAATGACATTCAGATGACGCCACTCCAGTGGCAACACACTGTCAATGGCGACTATCCCGTCAGCTGGCAAGTTAA GATCCCCAGCGAGAATATCGATATCACTATCACCCCGCTCAATCCTAATAGCGCCATGCCATTATCGACGCCCTACTGGG AAGGACCAGTGCAACTCTCTGGCAGCCATACTGGTACAGGTTATATGGAACTGACGGGCTATTGA
Upstream 100 bases:
>100_bases TACTGATTGCCTTAACCACCTGCACCTTAGCCGTGCTCTTGCCGCTGTATTGGCAAACCCGCAAGCCATTGGTCGCCAGT CTGCAGCAGGAGACCCTGTG
Downstream 100 bases:
>100_bases GTTCCGCTTAGACGGTATAGTTGCATCTTAAAAGCCCATCTCATTTAGGCTATTATTTAACAATACCGTCATTACCTCAT TCGCGTTCTATCATCCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKTLSIVWAVVGLMLIGGCDQTPQAQSTQSKSMANVVGTTSANQDDLAFTPIVPGYKFEFPRDHLAHNNFRQEWWYLTAN LTTETGEQLGAQWTQFRVALKPTDLQTIAPQVTDATPKSESTWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLD PYQIRLDNWHWQSETNALFPATLTVENPDFSYQLKLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGK MERVTGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTLMLFQLRDQSPAESAKNAPISAFYSARRMFADGTGRNINSTD NPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDITITPLNPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY
Sequences:
>Translated_394_residues MKTLSIVWAVVGLMLIGGCDQTPQAQSTQSKSMANVVGTTSANQDDLAFTPIVPGYKFEFPRDHLAHNNFRQEWWYLTAN LTTETGEQLGAQWTQFRVALKPTDLQTIAPQVTDATPKSESTWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLD PYQIRLDNWHWQSETNALFPATLTVENPDFSYQLKLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGK MERVTGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTLMLFQLRDQSPAESAKNAPISAFYSARRMFADGTGRNINSTD NPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDITITPLNPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY >Mature_394_residues MKTLSIVWAVVGLMLIGGCDQTPQAQSTQSKSMANVVGTTSANQDDLAFTPIVPGYKFEFPRDHLAHNNFRQEWWYLTAN LTTETGEQLGAQWTQFRVALKPTDLQTIAPQVTDATPKSESTWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLD PYQIRLDNWHWQSETNALFPATLTVENPDFSYQLKLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGK MERVTGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTLMLFQLRDQSPAESAKNAPISAFYSARRMFADGTGRNINSTD NPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDITITPLNPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44448; Mature: 44448
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSIVWAVVGLMLIGGCDQTPQAQSTQSKSMANVVGTTSANQDDLAFTPIVPGYKFEF CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCC PRDHLAHNNFRQEWWYLTANLTTETGEQLGAQWTQFRVALKPTDLQTIAPQVTDATPKSE CHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCEEEEEEEECCCCHHHHCCCCCCCCCCCC STWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQIRLDNWHWQSETNALFP CCHHHHEEEEEHHHHCCCCCCHHHHHHHHHHCCHHEEEECCEEEEECCEEECCCCCEEEE ATLTVENPDFSYQLKLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGK EEEEEECCCEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCCEEEEECEECCCCC MERVTGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTLMLFQLRDQSPAESAKNAPISA EEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHCCCCHHH FYSARRMFADGTGRNINSTDNPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDITITPL HHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEEEEEECCCCCEEEEEEC NPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECC >Mature Secondary Structure MKTLSIVWAVVGLMLIGGCDQTPQAQSTQSKSMANVVGTTSANQDDLAFTPIVPGYKFEF CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCC PRDHLAHNNFRQEWWYLTANLTTETGEQLGAQWTQFRVALKPTDLQTIAPQVTDATPKSE CHHHHHCCCCCEEEEEEEEEEECCCHHHHCCCEEEEEEEECCCCHHHHCCCCCCCCCCCC STWATQQLYLAHSALTSSNAHLAHEKWSRRHSEFAEVKLDPYQIRLDNWHWQSETNALFP CCHHHHEEEEEHHHHCCCCCCHHHHHHHHHHCCHHEEEECCEEEEECCEEECCCCCEEEE ATLTVENPDFSYQLKLNSQAPLQYQGANGYSLKSRDGQVASYYYSQPFIEISGEINRNGK EEEEEECCCEEEEEEECCCCCEEEECCCCCEEECCCCCEEEEEECCCEEEEECEECCCCC MERVTGQGWLDREWSSQFLTKTQQGWDWFALRLNDGSTLMLFQLRDQSPAESAKNAPISA EEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHCCCCHHH FYSARRMFADGTGRNINSTDNPNDIQMTPLQWQHTVNGDYPVSWQVKIPSENIDITITPL HHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCEEEEEEECCCCCEEEEEEC NPNSAMPLSTPYWEGPVQLSGSHTGTGYMELTGY CCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA