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The map label for this gene is ygiM [H]

Identifier: 126175654

GI number: 126175654

Start: 4053161

End: 4053712

Strand: Direct

Name: ygiM [H]

Synonym: Sbal_3457

Alternate gene names: 126175654

Gene position: 4053161-4053712 (Clockwise)

Preceding gene: 126175653

Following gene: 126175655

Centisome position: 79.05

GC content: 46.01

Gene sequence:

>552_bases
ATGATGTTACTGTCTTCCAACCTGCTGGCCGAAGGCCAATCCCGTTACATCTCGGATAACGTGTTTCTTTATCTTTTAGG
TGGCCCTGGTACTGAGTTTCGAATTCTTGGCTCGATTGAAGCCGGTCAACCTGTGACACTGCTCAACGAAACCCAAGGTG
ATTACTCTAAAATCATCGACCATAAAGGCCGTGAAGGTTGGGTACAAACTAACTTAATCAGCTCGACTCAGAGTTTCCGT
GAACAAGTGCCAGCGTTAACCACTGAGCTTACACAAGCTAAAGCTAAGCTAGCGGAAGTATTAAGTTCAACGGATAACCA
CGCCGACGAAGTTGCCGAACTGAAGGCTAAGCTAAGCGAGTTAGAAACAAACCTAGCCAAAACCACTCAAGAGCGTGAAC
AACTGAAGAATGCTGTAGATCGCACCGCCCAAGACGAGCGTTTTGAACTTTGGCGTCAAGGTGGGTTAATCGCAGGTTTG
GGTTTAATCCTAGGCATTATTTTAGTGTATTTACCCAGACCACAACGTCGCAGTAAAAAACGTTGGATGTGA

Upstream 100 bases:

>100_bases
ATGACTTCCCTCTTGCATTACAGGCCTCAAATCCCTAGCATGTGCAGACTATTTCGTTGATGAGAATACAAAAGTGTTTA
GACTCCTGACTCTGGTAGGA

Downstream 100 bases:

>100_bases
GTCTGACACACAAAAAGTCTTAATTTACCTTCCAAAAGCCAGTGTTTTCAAACACTGGCTTTTTTGTCAATCAAGCGTTA
CATCTACTTATTAACAAGCC

Product: SH3 type 3 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFR
EQVPALTTELTQAKAKLAEVLSSTDNHADEVAELKAKLSELETNLAKTTQEREQLKNAVDRTAQDERFELWRQGGLIAGL
GLILGIILVYLPRPQRRSKKRWM

Sequences:

>Translated_183_residues
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFR
EQVPALTTELTQAKAKLAEVLSSTDNHADEVAELKAKLSELETNLAKTTQEREQLKNAVDRTAQDERFELWRQGGLIAGL
GLILGIILVYLPRPQRRSKKRWM
>Mature_183_residues
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFR
EQVPALTTELTQAKAKLAEVLSSTDNHADEVAELKAKLSELETNLAKTTQEREQLKNAVDRTAQDERFELWRQGGLIAGL
GLILGIILVYLPRPQRRSKKRWM

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1605 [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=140, Percent_Identity=27.8571428571429, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 20485; Mature: 20485

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIID
CEEECCHHHHCCCHHEECCCEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHH
HKGREGWVQTNLISSTQSFREQVPALTTELTQAKAKLAEVLSSTDNHADEVAELKAKLSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LETNLAKTTQEREQLKNAVDRTAQDERFELWRQGGLIAGLGLILGIILVYLPRPQRRSKK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCC
RWM
CCC
>Mature Secondary Structure
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIID
CEEECCHHHHCCCHHEECCCEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHH
HKGREGWVQTNLISSTQSFREQVPALTTELTQAKAKLAEVLSSTDNHADEVAELKAKLSE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LETNLAKTTQEREQLKNAVDRTAQDERFELWRQGGLIAGLGLILGIILVYLPRPQRRSKK
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCC
RWM
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]