Definition | Shewanella baltica OS155 chromosome, complete genome. |
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Accession | NC_009052 |
Length | 5,127,376 |
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The map label for this gene is 126175643
Identifier: 126175643
GI number: 126175643
Start: 4042031
End: 4043005
Strand: Direct
Name: 126175643
Synonym: Sbal_3446
Alternate gene names: NA
Gene position: 4042031-4043005 (Clockwise)
Preceding gene: 126175640
Following gene: 126175644
Centisome position: 78.83
GC content: 50.26
Gene sequence:
>975_bases ATGGCAGGAATGCTAACCCGTGTTCTCACATCGATCCTCTTTTTAGCCGTTATGCTGTCGCTGACGGGTTGTGGCGATGA GAGACCGGATAAAATCGCGAAGTATCAACAACTCACGCAGCAACGTCTCGCTACGCTCACGACGATGATCGATGACGGGC AGTTGCGTAACGCTAACCTCTTAAAACAATACGCCATACTGTTAAAGCAGCAGAAACCTGATTTAGCCCCATTACTTGAT GAATTAGCAAAGGATTCTGGCACCCAAGGTCCCATGTATACCTCGCTGAAACGTCGATTAGATGAGTCGAAAGTGGCGAG TAACTTTGCTGATCTCGATCAACAGCTGGCCGAAGCGGAAAATCTTTATCAAGCCGCAGATCCCAGTCTGTTTAACGATA TGTTGTCAGATCCTGTCAACGTGGTCGCCGATATGTCCGACGGCAAACTGGCCCGCGTGAATGCGATTAGCCGTGAGGCC GCAACATTAGCCAATGGCGGCGAAGATTTTGGTCCAGGCAGTCAGCTAGTTGGTAATCCGTCTTACGGTAACTGGCAAAC CGACTCGAGCGGCACGTCGTTTTGGGCTTGGTATGGCATGTATTCGATGTTTTCGAATGTTTTCAATCGCCCAGTTTCCT ACGATCGTTGGTCGGGTAACCGAGGTTATAGCTATTACAATGACGTAGGTCGTTATCGCTATACCTCACCCAAACAAGCG GATGCGCAAAATAAGACCTTCGAACAAACGAAAAAACGTTTCGATTCCCAAGGTAAGCGCTTCGACAGCCCTTATGCCAA ACCGCGTACCGGTGGCACGGCGTTATCCCGTGAAAGCACCAGCACGCCCAAGGCCAGCAACACCACGAGCGCAAGCAAGA GTTCGAGTAGTAAGTTCCGCTCTAACTATGCTAAAGACAGCAGTTTCCGTAATTCCAGTAATCGCACGACCCGCAGTGTG CGCCGGGGCAAGTAA
Upstream 100 bases:
>100_bases ATTTAAGGGTACTATAACCTGCGCAGCAGGCATATTGGGCAAGCAGATTATTATTGCCTGCAAGTATTTGAGTTTTATTT CATTACCATTTGGAGAAAAC
Downstream 100 bases:
>100_bases CTAAGGATTTCCAATGACACTATTTCAGGATTTCGGTATCACACCAGAGCTAGCCATCATTCTGGCTATCGATCTCACCA TAGCCGTAATTTTGCTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANLLKQYAILLKQQKPDLAPLLD ELAKDSGTQGPMYTSLKRRLDESKVASNFADLDQQLAEAENLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREA ATLANGGEDFGPGSQLVGNPSYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFRSNYAKDSSFRNSSNRTTRSV RRGK
Sequences:
>Translated_324_residues MAGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANLLKQYAILLKQQKPDLAPLLD ELAKDSGTQGPMYTSLKRRLDESKVASNFADLDQQLAEAENLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREA ATLANGGEDFGPGSQLVGNPSYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFRSNYAKDSSFRNSSNRTTRSV RRGK >Mature_323_residues AGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANLLKQYAILLKQQKPDLAPLLDE LAKDSGTQGPMYTSLKRRLDESKVASNFADLDQQLAEAENLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREAA TLANGGEDFGPGSQLVGNPSYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQAD AQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFRSNYAKDSSFRNSSNRTTRSVR RGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35966; Mature: 35835
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LKQYAILLKQQKPDLAPLLDELAKDSGTQGPMYTSLKRRLDESKVASNFADLDQQLAEAE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREAATLANGGEDFGPGSQLVGNP HHHHHCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEECCCCCCC DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SNYAKDSSFRNSSNRTTRSVRRGK HHHHHCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure AGMLTRVLTSILFLAVMLSLTGCGDERPDKIAKYQQLTQQRLATLTTMIDDGQLRNANL CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH LKQYAILLKQQKPDLAPLLDELAKDSGTQGPMYTSLKRRLDESKVASNFADLDQQLAEAE HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLYQAADPSLFNDMLSDPVNVVADMSDGKLARVNAISREAATLANGGEDFGPGSQLVGNP HHHHHCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SYGNWQTDSSGTSFWAWYGMYSMFSNVFNRPVSYDRWSGNRGYSYYNDVGRYRYTSPKQA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCEECCCCCCC DAQNKTFEQTKKRFDSQGKRFDSPYAKPRTGGTALSRESTSTPKASNTTSASKSSSSKFR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH SNYAKDSSFRNSSNRTTRSVRRGK HHHHHCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA