| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is yqiK [H]
Identifier: 126175300
GI number: 126175300
Start: 3627445
End: 3629223
Strand: Reverse
Name: yqiK [H]
Synonym: Sbal_3099
Alternate gene names: 126175300
Gene position: 3629223-3627445 (Counterclockwise)
Preceding gene: 126175301
Following gene: 126175298
Centisome position: 70.78
GC content: 47.33
Gene sequence:
>1779_bases ATGGATGTGTTAACTGATATCGGTTCATCCGGTAGTTTTATTTTGCTCGTTGCCGGTATGGTGTTACTTGGCTTTATCGT GATCGGGTTAATTTTTGCCAAGTTATATAAACGTGCAACCAAAGAAATGGCCTTTGTGCGTACCGGCTTTGGCGGTGAGA AAATCATTAAAGATGGCGGCGCTATCGTACTGCCAGTGCTGCATGAAACCATTTCGGTCAACATGAATACCCTGCGTATC GAAGTGGAAAAAACTCAGAAAGATGCGCTGATCACTAAAGACAGAATGCGTGTCGATGTGAAGGCCGACTTCTACCTACG GGTTGCCCCAAATTCCGATGGTATTTCGATGGCGGCGCAAACCTTAGGTACGCGCACAAACCGTGTCGAAGAACTTAAAA AGCTGATGGAGTCTAAGTTTGTTGACGTACTCCGCGCCGTTGCCGCTGAAATGACCATGACAGAAATGCATGAGCAGCGT GCCGATTTTGTGCAACGTGTGCAAAACAACGTGGCTAACGATCTGGAGAAAAATGGTCTCGAACTCGAGTCGGTTTCGTT AACGGGTTTTGATCAAACTGATCTGCAGTTCTTCAATGAAAACAACGCATTCGATGCAGAAGGTCGTGCTCGTCTGGCGA AAATCATTGAAGAGAAACGTAAAGAAACCAACGATATCCAACAGGATAACCGGATTAAGATCGAGCAACGTAACCTCGAA GCCGAAAAAGAATCCCTAGAGATTGAAAAGTCGGAAGAAGAAGCACGCCTGATCCAGCAACAGTCTTTGGAATTTAAACG CGCCGATCAAAAAGCGGAAATCATTAAGCAGAAAGAAAATAAGGCCCGTGAAGAACGCGAAGCCGAAATTGCTAAAGAGC GCGCTATCGAAACGGCTCAAATCGAAAAGACTAAAGATATCGAAACCCGCGAGATTGAAAAGTATAAGTCGATTGAGCAA TCGCGCATTCAACAGCAAAGGGATATCGAAGTTTCTGAGCAGGAAAAACGCATTGCGGTTGCGGCTAAATCTGAAGAAGA ATCAGCTGCCCGTGCCCGTGCTGCTGAAGCCGAAAAACTGAAAGTTGAGAAAGAAGAAGCGGTAATCACAGCGCGCCAAG TGGCCGAAGCGAATCGTCGTAAAGAGATTGAAGTGATTGATGCCCGTAAAGAAGCTGAGCGTGATGCGGTAGGCGTAACT GTACAAGCCGAAGCTGAGAAACGTGCCGCTGAAGACAGATCGAGTGCGATTTTGATTGAAGCGCGCGCTAGCGCCGATGC GAAAAAACTGCAGGCCGAAGCAGATGAGAAAGTCTATGCCGTTGAAGCTGCGGGTAAGCAAGCACTTTACGAAGCTGAAA ACGTCTTGAGTGATGAGCAAATTGCCCTGCAAAAATCCCTCGCGATTTTAAAAGCGTTGCCTGAAATTGTGGCACAAGCC GTTAAACCGTTGGAAAACATCGAAGGCATTAAAATTCTTCAAGGCTATGGCGCTGGCAATCAATTTGCCGCGGGTGGCGA AGGCGCTCACCATCAAGGTGGCATTGCCGAGCAAGTCACCAGTGCCGCATTAAACTATCGCGCTAATGCGCCGGTGGTTG ATGCCATGCTTAGAGAGCTGGGCTTAGTGAACGGTGATACTGGCACCTTGAATGATTTATTGAACGGCAATAATACGTTA ACCGCCGAGGCGTTAAGTGGTGTGAAGTCGTCTCATGCTGAGCTTAAAGATTACAGCCAAACGCATGTGGTCGAGAGTCA AAGCGTGCCTAAGCTGTAA
Upstream 100 bases:
>100_bases ACTCAAGTAGTGCTACTTAAGCGTGAAGGCCGTGTCTGGTCTGCTACGCGTTTTGATAATTAATCGTCCCCCAGCCATAA ATCAATTGAAAGGAAATCAA
Downstream 100 bases:
>100_bases AGTCGACTTAGCGAACTCTATGAGGTTAGCTTGATGACTGAGCTTTATGAGATTAAATCCGCCAAGTAAGCTTTTGCGCT GAGTGAAGTCAGCACTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MDVLTDIGSSGSFILLVAGMVLLGFIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGGAIVLPVLHETISVNMNTLRI EVEKTQKDALITKDRMRVDVKADFYLRVAPNSDGISMAAQTLGTRTNRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQR ADFVQRVQNNVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQDNRIKIEQRNLE AEKESLEIEKSEEEARLIQQQSLEFKRADQKAEIIKQKENKAREEREAEIAKERAIETAQIEKTKDIETREIEKYKSIEQ SRIQQQRDIEVSEQEKRIAVAAKSEEESAARARAAEAEKLKVEKEEAVITARQVAEANRRKEIEVIDARKEAERDAVGVT VQAEAEKRAAEDRSSAILIEARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLSDEQIALQKSLAILKALPEIVAQA VKPLENIEGIKILQGYGAGNQFAAGGEGAHHQGGIAEQVTSAALNYRANAPVVDAMLRELGLVNGDTGTLNDLLNGNNTL TAEALSGVKSSHAELKDYSQTHVVESQSVPKL
Sequences:
>Translated_592_residues MDVLTDIGSSGSFILLVAGMVLLGFIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGGAIVLPVLHETISVNMNTLRI EVEKTQKDALITKDRMRVDVKADFYLRVAPNSDGISMAAQTLGTRTNRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQR ADFVQRVQNNVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQDNRIKIEQRNLE AEKESLEIEKSEEEARLIQQQSLEFKRADQKAEIIKQKENKAREEREAEIAKERAIETAQIEKTKDIETREIEKYKSIEQ SRIQQQRDIEVSEQEKRIAVAAKSEEESAARARAAEAEKLKVEKEEAVITARQVAEANRRKEIEVIDARKEAERDAVGVT VQAEAEKRAAEDRSSAILIEARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLSDEQIALQKSLAILKALPEIVAQA VKPLENIEGIKILQGYGAGNQFAAGGEGAHHQGGIAEQVTSAALNYRANAPVVDAMLRELGLVNGDTGTLNDLLNGNNTL TAEALSGVKSSHAELKDYSQTHVVESQSVPKL >Mature_592_residues MDVLTDIGSSGSFILLVAGMVLLGFIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGGAIVLPVLHETISVNMNTLRI EVEKTQKDALITKDRMRVDVKADFYLRVAPNSDGISMAAQTLGTRTNRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQR ADFVQRVQNNVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQDNRIKIEQRNLE AEKESLEIEKSEEEARLIQQQSLEFKRADQKAEIIKQKENKAREEREAEIAKERAIETAQIEKTKDIETREIEKYKSIEQ SRIQQQRDIEVSEQEKRIAVAAKSEEESAARARAAEAEKLKVEKEEAVITARQVAEANRRKEIEVIDARKEAERDAVGVT VQAEAEKRAAEDRSSAILIEARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLSDEQIALQKSLAILKALPEIVAQA VKPLENIEGIKILQGYGAGNQFAAGGEGAHHQGGIAEQVTSAALNYRANAPVVDAMLRELGLVNGDTGTLNDLLNGNNTL TAEALSGVKSSHAELKDYSQTHVVESQSVPKL
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]
Homologues:
Organism=Escherichia coli, GI1789430, Length=562, Percent_Identity=44.8398576512456, Blast_Score=434, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 65582; Mature: 65582
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLTDIGSSGSFILLVAGMVLLGFIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC AIVLPVLHETISVNMNTLRIEVEKTQKDALITKDRMRVDVKADFYLRVAPNSDGISMAAQ EEEEHHHHHHHHCCEEEEEEEEECCCCCHHEECCCEEEEEEEEEEEEECCCCCCHHHHHH TLGTRTNRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQRADFVQRVQNNVANDLEKNGL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQDNRIKIEQRNLE EEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCH AEKESLEIEKSEEEARLIQQQSLEFKRADQKAEIIKQKENKAREEREAEIAKERAIETAQ HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKTKDIETREIEKYKSIEQSRIQQQRDIEVSEQEKRIAVAAKSEEESAARARAAEAEKL HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH KVEKEEAVITARQVAEANRRKEIEVIDARKEAERDAVGVTVQAEAEKRAAEDRSSAILIE HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCEEEECCHHHHHHCCCCCEEEEE ARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLSDEQIALQKSLAILKALPEIVAQA ECCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKPLENIEGIKILQGYGAGNQFAAGGEGAHHQGGIAEQVTSAALNYRANAPVVDAMLREL HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH GLVNGDTGTLNDLLNGNNTLTAEALSGVKSSHAELKDYSQTHVVESQSVPKL CCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC >Mature Secondary Structure MDVLTDIGSSGSFILLVAGMVLLGFIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC AIVLPVLHETISVNMNTLRIEVEKTQKDALITKDRMRVDVKADFYLRVAPNSDGISMAAQ EEEEHHHHHHHHCCEEEEEEEEECCCCCHHEECCCEEEEEEEEEEEEECCCCCCHHHHHH TLGTRTNRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQRADFVQRVQNNVANDLEKNGL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQDNRIKIEQRNLE EEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHCCH AEKESLEIEKSEEEARLIQQQSLEFKRADQKAEIIKQKENKAREEREAEIAKERAIETAQ HHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEKTKDIETREIEKYKSIEQSRIQQQRDIEVSEQEKRIAVAAKSEEESAARARAAEAEKL HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH KVEKEEAVITARQVAEANRRKEIEVIDARKEAERDAVGVTVQAEAEKRAAEDRSSAILIE HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCEEEECCHHHHHHCCCCCEEEEE ARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLSDEQIALQKSLAILKALPEIVAQA ECCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKPLENIEGIKILQGYGAGNQFAAGGEGAHHQGGIAEQVTSAALNYRANAPVVDAMLREL HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH GLVNGDTGTLNDLLNGNNTLTAEALSGVKSSHAELKDYSQTHVVESQSVPKL CCCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]