| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175273
Identifier: 126175273
GI number: 126175273
Start: 3592771
End: 3594351
Strand: Reverse
Name: 126175273
Synonym: Sbal_3072
Alternate gene names: NA
Gene position: 3594351-3592771 (Counterclockwise)
Preceding gene: 126175274
Following gene: 126175269
Centisome position: 70.1
GC content: 48.83
Gene sequence:
>1581_bases GTGGATAAAAAACAGGTCTCATGGGGCGGTGTAGCGCTGGCGATTTTTGCCTTGGGTCATGTGGTTAACTTACTCATAGA TAAACAGGGCTCTGATATATCGCCCGAATTAAAACAGCAAATTTCTGACACGATCTTGGCTCACAGACCACCATCCACCG CGAATAATTCATTAACGTCCATTCCGAATAATCTTCAAGTGGCTGACGAGTCGTCCAAAATCCGGATGCCCGCTCAGTTA GCCCAAGTGAGTCAAATCTACAGTAATCTCAGTGCATTTGCGGCGCTCAAACAAGATGGCACTGTGGTTGCGTGGGGCGA TCGTGACTGTGGTGGCGATATCAATAATGCTGCTGAGCCTCTGGTCAATGTAAAACAGCTATACACGACAGAGAATACCT GTGGTTTTGCGGCCTTAACCCGTGACGGTAAACTTATCCCCTGGGGGAGGGGGATAGGAAGGAAGCAAGTGCAGACGGGC GTTCGTTCTTTGGTGTTGGGAGAGGGGCTTTATGCGGCCATTAAACAAGATGGTAGTGTAGTCAGTTGGTCTATCCTCGA TTCAACACCACTTGCACAGTTCTCGGATCTATATGCAGCGCCAGCGATGACCCATGTTGACTCTGTGTTGATTAACGAAG GGGCCTTTGCTGCCTTAAAACAGGATGGGACTGTAGTAACTTGGGGAGAAGAAGCTTATGGCGGCGATAGTCGCCACGTG GCCTCTGCGCTTAACCATGTCGATCTGCTCTATGCCAACAATAATGCCTTTACCGCGAGGACTGCGACGGGAAAATTAGT GTCTTGGGGCGCTGTCAGCGATGATCAAAAAGGCCGCGAACAATTGGCAAAACTCAACCAATTAGCGCCTGCAGTGAAAG TTGTCAACACTGATTATGGGTTTGCGGCGCTGCTGGCGGATGGCAGCGTATATACCTGGGGTGAGGGCGAATTGACTGAG CATCATGTCGCGTTTCCAGATCGTTTATCTACCACAAACCACGCCGATAAAGTGATTGATATTTATGCAAATCGCGGCGC ATTTGCAGCCCTAACCATCAGTCGTCAACTCTACGTATGGGGCAGTAAATTCAATGGTGCTGATACATCAGTCCTACACA ATAAGTTGCAAGACGTGCACAAGGTTTATCCCGTTGATGAGGGCTTTGTCGCGCTACGTAAGGATAATACCGCGATTGCT TGGGATAGTTGGGACTTGGTAGACAAGCAACCACATTATCAAGAAGTCACTCAGGTGAGCAAAGTGGTGACTTATGAGCG GGAGTTTGTCTTTTTAAAACAGGATGGCACTGTGGTTGATGGCCACTCTGGACCCAAAACTCGAATCACTCAAGCAACGG ATATTTTCCCTACTGGCTTTGGGTTTACGGCTAAACGCCAAGATGGCTCGGTTGCCGTGTGGATGGGAGGTAATCCAGCG CTGACCATCAATAAACAATTCGTTGATTTGAGCCAAATGCGCGACATTCGCAGCAATTTGATTGATGCCATTGCTTTAAT GGCCGATGGCCGAGTGCAGGCATGGAATATGAGGGGCCATAGCGGACAATCTACGGAATAA
Upstream 100 bases:
>100_bases CGTTTTGGTTACAATCACAGTTCACATTTAGCGTCCTCAGTCGACGTTATGTTTCAGTTAAAACTCAGTGAGAGTTTGCA GTTACGATAAGGATATACTT
Downstream 100 bases:
>100_bases CAAGCGCAAAAACAATAAAACCAAAGGGCTAAGGTTATTTACACCTTAGCCCTTTCTATTTAGGCGAGTTTTTCTTGCTT TAAGCTTGATTGGCTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MDKKQVSWGGVALAIFALGHVVNLLIDKQGSDISPELKQQISDTILAHRPPSTANNSLTSIPNNLQVADESSKIRMPAQL AQVSQIYSNLSAFAALKQDGTVVAWGDRDCGGDINNAAEPLVNVKQLYTTENTCGFAALTRDGKLIPWGRGIGRKQVQTG VRSLVLGEGLYAAIKQDGSVVSWSILDSTPLAQFSDLYAAPAMTHVDSVLINEGAFAALKQDGTVVTWGEEAYGGDSRHV ASALNHVDLLYANNNAFTARTATGKLVSWGAVSDDQKGREQLAKLNQLAPAVKVVNTDYGFAALLADGSVYTWGEGELTE HHVAFPDRLSTTNHADKVIDIYANRGAFAALTISRQLYVWGSKFNGADTSVLHNKLQDVHKVYPVDEGFVALRKDNTAIA WDSWDLVDKQPHYQEVTQVSKVVTYEREFVFLKQDGTVVDGHSGPKTRITQATDIFPTGFGFTAKRQDGSVAVWMGGNPA LTINKQFVDLSQMRDIRSNLIDAIALMADGRVQAWNMRGHSGQSTE
Sequences:
>Translated_526_residues MDKKQVSWGGVALAIFALGHVVNLLIDKQGSDISPELKQQISDTILAHRPPSTANNSLTSIPNNLQVADESSKIRMPAQL AQVSQIYSNLSAFAALKQDGTVVAWGDRDCGGDINNAAEPLVNVKQLYTTENTCGFAALTRDGKLIPWGRGIGRKQVQTG VRSLVLGEGLYAAIKQDGSVVSWSILDSTPLAQFSDLYAAPAMTHVDSVLINEGAFAALKQDGTVVTWGEEAYGGDSRHV ASALNHVDLLYANNNAFTARTATGKLVSWGAVSDDQKGREQLAKLNQLAPAVKVVNTDYGFAALLADGSVYTWGEGELTE HHVAFPDRLSTTNHADKVIDIYANRGAFAALTISRQLYVWGSKFNGADTSVLHNKLQDVHKVYPVDEGFVALRKDNTAIA WDSWDLVDKQPHYQEVTQVSKVVTYEREFVFLKQDGTVVDGHSGPKTRITQATDIFPTGFGFTAKRQDGSVAVWMGGNPA LTINKQFVDLSQMRDIRSNLIDAIALMADGRVQAWNMRGHSGQSTE >Mature_526_residues MDKKQVSWGGVALAIFALGHVVNLLIDKQGSDISPELKQQISDTILAHRPPSTANNSLTSIPNNLQVADESSKIRMPAQL AQVSQIYSNLSAFAALKQDGTVVAWGDRDCGGDINNAAEPLVNVKQLYTTENTCGFAALTRDGKLIPWGRGIGRKQVQTG VRSLVLGEGLYAAIKQDGSVVSWSILDSTPLAQFSDLYAAPAMTHVDSVLINEGAFAALKQDGTVVTWGEEAYGGDSRHV ASALNHVDLLYANNNAFTARTATGKLVSWGAVSDDQKGREQLAKLNQLAPAVKVVNTDYGFAALLADGSVYTWGEGELTE HHVAFPDRLSTTNHADKVIDIYANRGAFAALTISRQLYVWGSKFNGADTSVLHNKLQDVHKVYPVDEGFVALRKDNTAIA WDSWDLVDKQPHYQEVTQVSKVVTYEREFVFLKQDGTVVDGHSGPKTRITQATDIFPTGFGFTAKRQDGSVAVWMGGNPA LTINKQFVDLSQMRDIRSNLIDAIALMADGRVQAWNMRGHSGQSTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57046; Mature: 57046
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKQVSWGGVALAIFALGHVVNLLIDKQGSDISPELKQQISDTILAHRPPSTANNSLTS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHC IPNNLQVADESSKIRMPAQLAQVSQIYSNLSAFAALKQDGTVVAWGDRDCGGDINNAAEP CCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHH LVNVKQLYTTENTCGFAALTRDGKLIPWGRGIGRKQVQTGVRSLVLGEGLYAAIKQDGSV HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEHHCCCCE VSWSILDSTPLAQFSDLYAAPAMTHVDSVLINEGAFAALKQDGTVVTWGEEAYGGDSRHV EEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEECCHHCCCCHHHH ASALNHVDLLYANNNAFTARTATGKLVSWGAVSDDQKGREQLAKLNQLAPAVKVVNTDYG HHHHCCEEEEEECCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC FAALLADGSVYTWGEGELTEHHVAFPDRLSTTNHADKVIDIYANRGAFAALTISRQLYVW EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEE GSKFNGADTSVLHNKLQDVHKVYPVDEGFVALRKDNTAIAWDSWDLVDKQPHYQEVTQVS ECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHH KVVTYEREFVFLKQDGTVVDGHSGPKTRITQATDIFPTGFGFTAKRQDGSVAVWMGGNPA HHHEEEEEEEEEECCCEEEECCCCCCCEEEECCCCCCCCCCCEEECCCCCEEEEECCCEE LTINKQFVDLSQMRDIRSNLIDAIALMADGRVQAWNMRGHSGQSTE EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MDKKQVSWGGVALAIFALGHVVNLLIDKQGSDISPELKQQISDTILAHRPPSTANNSLTS CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHC IPNNLQVADESSKIRMPAQLAQVSQIYSNLSAFAALKQDGTVVAWGDRDCGGDINNAAEP CCCCCEEECCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHH LVNVKQLYTTENTCGFAALTRDGKLIPWGRGIGRKQVQTGVRSLVLGEGLYAAIKQDGSV HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEHHCCCCE VSWSILDSTPLAQFSDLYAAPAMTHVDSVLINEGAFAALKQDGTVVTWGEEAYGGDSRHV EEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCEEEECCHHCCCCHHHH ASALNHVDLLYANNNAFTARTATGKLVSWGAVSDDQKGREQLAKLNQLAPAVKVVNTDYG HHHHCCEEEEEECCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC FAALLADGSVYTWGEGELTEHHVAFPDRLSTTNHADKVIDIYANRGAFAALTISRQLYVW EEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEE GSKFNGADTSVLHNKLQDVHKVYPVDEGFVALRKDNTAIAWDSWDLVDKQPHYQEVTQVS ECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHH KVVTYEREFVFLKQDGTVVDGHSGPKTRITQATDIFPTGFGFTAKRQDGSVAVWMGGNPA HHHEEEEEEEEEECCCEEEECCCCCCCEEEECCCCCCCCCCCEEECCCCCEEEEECCCEE LTINKQFVDLSQMRDIRSNLIDAIALMADGRVQAWNMRGHSGQSTE EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA