| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175274
Identifier: 126175274
GI number: 126175274
Start: 3594579
End: 3595493
Strand: Reverse
Name: 126175274
Synonym: Sbal_3073
Alternate gene names: NA
Gene position: 3595493-3594579 (Counterclockwise)
Preceding gene: 126175276
Following gene: 126175273
Centisome position: 70.12
GC content: 47.54
Gene sequence:
>915_bases GTGAAATATTTGCTGACGTATTTTAAGGGAATGGCCATGGGCGCTGCCGATGTCGTGCCAGGCGTTTCGGGCGGCACCAT AGCGTTTATTACCGGTATTCTCGATACCTTGCTCGACAGTGTAAAACGCATCAATCCTTCCCTTTGGGGCGTGATTAAGT CGCAGGGCATAAAAGGGGCATTTTCCCATATTAATGGTGGCTTTTTAGTGAGTCTGCTGGCGGGGATCCTGACCAGTATT TTTACCTTTGCTAAGCTGATCTCTTGGTTACTGGCGACGCATCCGATCCCGATTTGGTCGTTCTTTTTTGGGCTTATTCT TATCTCTGTCGTGCATATGCTTAAGCAAGTGAGTGGTTTCACTGTGGCACGTTTAGGTTTATTTGCATTAGGTGTGCTGG CCGCATGGGCGATAACTGTGTTAAATCCGGTCGCGGTAGAAGCCAGTTACATGAATATCTTCTTCGGTGGCGCGATTGCG ATTTGTGCCATGGTGTTACCGGGGATCTCTGGCAGTTTTATCTTATTATTACTGGGTTTATATCCCGTGGTTTTAGCCGC GGCTAAAAATATTCAGCTGGATATTTTGGCCTGTTTCGCGGTAGGTGCTGTGGTGGGATTACTGACATTCAGTCATCTAT TGTCGGCACTGCTGCGTAAGCACCACGATGCCACTATCGTGTTTCTAACCGGATTAATGTTAGGCACCTTAGGTAAAATT TGGCCATGGAAAGAAACTTTGACTTGGCGGACTAACTCCCACGGTGAGCAAGTGCCTTTGCTGGAGCAAAATATTTCGCC GCTTAATTTTGAGCAAGTGACGGGCCAACCTTCGCAACTCGCCTTTGCGATTGTGTGTATGCTGGCAGCGATTGCACTGG TATGGGGTTTAGAGAAAGTGGGTAAAAGGGATTAG
Upstream 100 bases:
>100_bases AGCAAACTTCATTTCGCGGTTTTTAGTGTAACACCGTATAATTGCGGCCAATTTGTCGTTTAGCGGCAATGGCATATTGA TTTAACTACAAGGACTCACA
Downstream 100 bases:
>100_bases CTCTTTGTTGCCTCAACATCATATTCAATAAAAGCAGCGAGATAGGCTGCTTTTTATTTTTTTGCTCATATGCTCATCTT ACTTGAATCTGGTCAGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLDSVKRINPSLWGVIKSQGIKGAFSHINGGFLVSLLAGILTSI FTFAKLISWLLATHPIPIWSFFFGLILISVVHMLKQVSGFTVARLGLFALGVLAAWAITVLNPVAVEASYMNIFFGGAIA ICAMVLPGISGSFILLLLGLYPVVLAAAKNIQLDILACFAVGAVVGLLTFSHLLSALLRKHHDATIVFLTGLMLGTLGKI WPWKETLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLAFAIVCMLAAIALVWGLEKVGKRD
Sequences:
>Translated_304_residues MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLDSVKRINPSLWGVIKSQGIKGAFSHINGGFLVSLLAGILTSI FTFAKLISWLLATHPIPIWSFFFGLILISVVHMLKQVSGFTVARLGLFALGVLAAWAITVLNPVAVEASYMNIFFGGAIA ICAMVLPGISGSFILLLLGLYPVVLAAAKNIQLDILACFAVGAVVGLLTFSHLLSALLRKHHDATIVFLTGLMLGTLGKI WPWKETLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLAFAIVCMLAAIALVWGLEKVGKRD >Mature_304_residues MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLDSVKRINPSLWGVIKSQGIKGAFSHINGGFLVSLLAGILTSI FTFAKLISWLLATHPIPIWSFFFGLILISVVHMLKQVSGFTVARLGLFALGVLAAWAITVLNPVAVEASYMNIFFGGAIA ICAMVLPGISGSFILLLLGLYPVVLAAAKNIQLDILACFAVGAVVGLLTFSHLLSALLRKHHDATIVFLTGLMLGTLGKI WPWKETLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLAFAIVCMLAAIALVWGLEKVGKRD
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32547; Mature: 32547
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLDSVKRINPSLWGVIKSQGIKGA CHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHH FSHINGGFLVSLLAGILTSIFTFAKLISWLLATHPIPIWSFFFGLILISVVHMLKQVSGF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH TVARLGLFALGVLAAWAITVLNPVAVEASYMNIFFGGAIAICAMVLPGISGSFILLLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YPVVLAAAKNIQLDILACFAVGAVVGLLTFSHLLSALLRKHHDATIVFLTGLMLGTLGKI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC WPWKETLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLAFAIVCMLAAIALVWGLEKV CCCCHHEEECCCCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GKRD CCCC >Mature Secondary Structure MKYLLTYFKGMAMGAADVVPGVSGGTIAFITGILDTLLDSVKRINPSLWGVIKSQGIKGA CHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHH FSHINGGFLVSLLAGILTSIFTFAKLISWLLATHPIPIWSFFFGLILISVVHMLKQVSGF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH TVARLGLFALGVLAAWAITVLNPVAVEASYMNIFFGGAIAICAMVLPGISGSFILLLLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YPVVLAAAKNIQLDILACFAVGAVVGLLTFSHLLSALLRKHHDATIVFLTGLMLGTLGKI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC WPWKETLTWRTNSHGEQVPLLEQNISPLNFEQVTGQPSQLAFAIVCMLAAIALVWGLEKV CCCCHHEEECCCCCCCCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GKRD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA