| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175173
Identifier: 126175173
GI number: 126175173
Start: 3487663
End: 3488607
Strand: Reverse
Name: 126175173
Synonym: Sbal_2971
Alternate gene names: NA
Gene position: 3488607-3487663 (Counterclockwise)
Preceding gene: 126175174
Following gene: 126175169
Centisome position: 68.04
GC content: 47.94
Gene sequence:
>945_bases GTGGCTAATCGAGAACTCTCACCATCGAGCGCAAAACTGCGCCTGCTGAAAAGCGCTGTATTACTGTTGCCGTTAATGAG TTGTGCCGCTATTGCAGCGGATAAACCTTCGCAGGAATACAAGCCTTTTAGATTAAGTGTCGCGCAGATCAGCACCCAGA GTGCCGAGGTTGCCAATGGTAATACTGAGCTACAAAGGGACAGTTTATTACTGAGTGCAGGGATGAATGTTCCGTTAAAT CAGCAATGGTCTTTGGGCTTTCGTGTGGGTTACGACAGGCTGGATTATGATTGGCGCAATATCACCCTCACTGGCGCTAA CAATGTCGCACCGCTTTTTGGTACCGACGGGCAGAATTGGGATCATATCAATCGTTATCGTGCCGGAGTGTCGTTAAATT ATCGCATGGATAAACATTGGGCCTTCTTTTTAGCGCCGCAGATCCAATATGCCTACGCCGATACTGCATCGGCCAGCGAA GCCCAGAGTTACGATATTGTGGCGTCTGCCATGTATGCATTTGATTCGGGGAATATGATTGGTTTTGGCGTCGCGTATCT TAATGATATCGATGAAGTTCGCACTGTGCCTTATCTCGCTATGCGCTGGCAGATAGATGAACATTGGGCACTCGCCAATC CTTTCCAAGCTGGTTTTAGTGGTCCTGCAGGATTAGAGCTGAGTTATCGATTTAATTCCGATTGGAATGTCGGCTTTGGT AGTTCGCGTCGTACTGAGCGATTCCTTATCGAAGACGATGGCACAGTGGTAGAAACGAACGAATGGGTGAGTTATTTACG TGGCGGTTGGCAGGCAACCCCAGCATTAACAGTGAATCTTTACGCCGGTTATTACTTTGATGGTGAGTTAGAAGTGACCG ACCAAGCCGCACTTGAAATGGATAGCCAAGGCGCTGCGGCCTTGGATATCGAATTCAAATTCTAA
Upstream 100 bases:
>100_bases TATCATTTTGTATCTGAATATTGAAAGCATGAACCTTTTAGCTTGATAGCGCGTATTATGCGCAAAAATCTGTTAATCAA TTTAAATGCAAGGAGCTGAC
Downstream 100 bases:
>100_bases CGTTAATGTCAGTTATTTGCCTAGCATGGCCTCTTTGAGGCTTTTCTGGGCTGGCTTGTCACCTAGCCAAATTTTTAACA GTGCTTGACGGAACATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MANRELSPSSAKLRLLKSAVLLLPLMSCAAIAADKPSQEYKPFRLSVAQISTQSAEVANGNTELQRDSLLLSAGMNVPLN QQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNWDHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASE AQSYDIVASAMYAFDSGNMIGFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG SSRRTERFLIEDDGTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEMDSQGAAALDIEFKF
Sequences:
>Translated_314_residues MANRELSPSSAKLRLLKSAVLLLPLMSCAAIAADKPSQEYKPFRLSVAQISTQSAEVANGNTELQRDSLLLSAGMNVPLN QQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNWDHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASE AQSYDIVASAMYAFDSGNMIGFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG SSRRTERFLIEDDGTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEMDSQGAAALDIEFKF >Mature_313_residues ANRELSPSSAKLRLLKSAVLLLPLMSCAAIAADKPSQEYKPFRLSVAQISTQSAEVANGNTELQRDSLLLSAGMNVPLNQ QWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNWDHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASEA QSYDIVASAMYAFDSGNMIGFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFGS SRRTERFLIEDDGTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEMDSQGAAALDIEFKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35026; Mature: 34895
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRELSPSSAKLRLLKSAVLLLPLMSCAAIAADKPSQEYKPFRLSVAQISTQSAEVANG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHCCCCCCEECCC NTELQRDSLLLSAGMNVPLNQQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNW CCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCCC DHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASEAQSYDIVASAMYAFDSGNMI HHHHHHHCCEEEEEEECCCEEEEEECEEEEEECCCCCCCCCCCHHHHEEEEEEECCCCEE GFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG EEEHHHHCCHHHHHCCCEEEEEEEECCCEEECCCHHCCCCCCCCCEEEEEECCCCCCCCC SSRRTERFLIEDDGTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEM CCCCCEEEEEECCCCEEECHHHHHHHHCCCEECCEEEEEEEEEEEECCEEEECCHHHEEE DSQGAAALDIEFKF CCCCCEEEEEEEEC >Mature Secondary Structure ANRELSPSSAKLRLLKSAVLLLPLMSCAAIAADKPSQEYKPFRLSVAQISTQSAEVANG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHCCCCCCEECCC NTELQRDSLLLSAGMNVPLNQQWSLGFRVGYDRLDYDWRNITLTGANNVAPLFGTDGQNW CCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEECCCCCCC DHINRYRAGVSLNYRMDKHWAFFLAPQIQYAYADTASASEAQSYDIVASAMYAFDSGNMI HHHHHHHCCEEEEEEECCCEEEEEECEEEEEECCCCCCCCCCCHHHHEEEEEEECCCCEE GFGVAYLNDIDEVRTVPYLAMRWQIDEHWALANPFQAGFSGPAGLELSYRFNSDWNVGFG EEEHHHHCCHHHHHCCCEEEEEEEECCCEEECCCHHCCCCCCCCCEEEEEECCCCCCCCC SSRRTERFLIEDDGTVVETNEWVSYLRGGWQATPALTVNLYAGYYFDGELEVTDQAALEM CCCCCEEEEEECCCCEEECHHHHHHHHCCCEECCEEEEEEEEEEEECCEEEECCHHHEEE DSQGAAALDIEFKF CCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA