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The map label for this gene is 126175169

Identifier: 126175169

GI number: 126175169

Start: 3482087

End: 3483082

Strand: Reverse

Name: 126175169

Synonym: Sbal_2967

Alternate gene names: NA

Gene position: 3483082-3482087 (Counterclockwise)

Preceding gene: 126175173

Following gene: 126175168

Centisome position: 67.93

GC content: 39.56

Gene sequence:

>996_bases
ATGTTTGATAACAAAACGATTTTGATTACCGGTGGCACAGGGTCATTTGGACAAAAATACACTAAAACGATATTAGCCAA
ATATAAGCCTAAGCGCCTGATTATTCTATCTCGCGATGAGCTTAAACAGTACGAAATGCAGCAGATTTATAATGCGCCAT
GCATGCGTTACTTTATTGGTGATGTACGTGATGGCGATCGGTTAGAACAAGCTTTTAAAGATGTTGATTTCGTCATTCAT
GCAGCAGCTCTAAAGCAAGTTCCTGCCGCGGAATACAACCCTATGGAATGTATCAAAACGAACATATACGGTGCTGAAAA
TGTTATTCGTGCAGCAATATCTAATAATGTTTCGAAAGTGATTGCTTTATCGACAGACAAAGCAGCCAATCCTATTAACC
TTTATGGCGCCACAAAATTGGCATCAGATAAGCTTTTTGTTGCGGCGAATAATATTGTTGGCTCGGGGAAGACGCGTTTT
GCTGCTGTTCGTTATGGTAATGTGGTGGGTTCTCGCGGCTCTGTAGTGCCCTTTTTTAAGCAACTCATCGCTAATGGAGC
TGATGCGTTACCTATCACTCATCAAGATATGACCCGTTTTTGGATTTCCTTGCAAGATGGTGTGGATTTTGTTCTCAAAA
ACTTTGAGCGAATGCAAGGTGGTGAAATTTTTGTGCCTAAAATTCCCTCAGTAAGAATTACTGATCTAGCAGCTGCTTAT
GCTCCTGATTTAAAAAAAGAAATAGTAGGAATCCGTCCAGGCGAAAAAATGCACGAAATTATGTGTCCAGGAGATGATTG
CCACCATACATTAGAATTTGATGATCATTTTGTAATAATGCCAAGCATAAAGTTTTTTGGGCGTGAGACCGATTTTTGTA
CTAATCATTTAGGTGAAAAAGGACATCTTGTCCCACAAGGGTTTGAATATAACTCAGGTACAAACCCAAAGTTTCTCACC
ATTGATGAAATCTTAGCAATGGACAAACTTGCATGA

Upstream 100 bases:

>100_bases
TTTTGGCGCGAATCTTGTAAGAAGCAGGGCGTGTTGATAAATTCGATCATTGTTGTCAGAAATTGCTAATCGAAGGTTTT
TATAGTTAGTGGGGAAGTCT

Downstream 100 bases:

>100_bases
TTCCATATGGTAAGCAAGATATTAATCAGGATGATATCGATGCTGTGCTTGCGGTATTGAAATCAGACTATTTGACGCAA
GGTCCAGTAGTTCCTGTGTT

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFDNKTILITGGTGSFGQKYTKTILAKYKPKRLIILSRDELKQYEMQQIYNAPCMRYFIGDVRDGDRLEQAFKDVDFVIH
AAALKQVPAAEYNPMECIKTNIYGAENVIRAAISNNVSKVIALSTDKAANPINLYGATKLASDKLFVAANNIVGSGKTRF
AAVRYGNVVGSRGSVVPFFKQLIANGADALPITHQDMTRFWISLQDGVDFVLKNFERMQGGEIFVPKIPSVRITDLAAAY
APDLKKEIVGIRPGEKMHEIMCPGDDCHHTLEFDDHFVIMPSIKFFGRETDFCTNHLGEKGHLVPQGFEYNSGTNPKFLT
IDEILAMDKLA

Sequences:

>Translated_331_residues
MFDNKTILITGGTGSFGQKYTKTILAKYKPKRLIILSRDELKQYEMQQIYNAPCMRYFIGDVRDGDRLEQAFKDVDFVIH
AAALKQVPAAEYNPMECIKTNIYGAENVIRAAISNNVSKVIALSTDKAANPINLYGATKLASDKLFVAANNIVGSGKTRF
AAVRYGNVVGSRGSVVPFFKQLIANGADALPITHQDMTRFWISLQDGVDFVLKNFERMQGGEIFVPKIPSVRITDLAAAY
APDLKKEIVGIRPGEKMHEIMCPGDDCHHTLEFDDHFVIMPSIKFFGRETDFCTNHLGEKGHLVPQGFEYNSGTNPKFLT
IDEILAMDKLA
>Mature_331_residues
MFDNKTILITGGTGSFGQKYTKTILAKYKPKRLIILSRDELKQYEMQQIYNAPCMRYFIGDVRDGDRLEQAFKDVDFVIH
AAALKQVPAAEYNPMECIKTNIYGAENVIRAAISNNVSKVIALSTDKAANPINLYGATKLASDKLFVAANNIVGSGKTRF
AAVRYGNVVGSRGSVVPFFKQLIANGADALPITHQDMTRFWISLQDGVDFVLKNFERMQGGEIFVPKIPSVRITDLAAAY
APDLKKEIVGIRPGEKMHEIMCPGDDCHHTLEFDDHFVIMPSIKFFGRETDFCTNHLGEKGHLVPQGFEYNSGTNPKFLT
IDEILAMDKLA

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 36854; Mature: 36854

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDNKTILITGGTGSFGQKYTKTILAKYKPKRLIILSRDELKQYEMQQIYNAPCMRYFIG
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHC
DVRDGDRLEQAFKDVDFVIHAAALKQVPAAEYNPMECIKTNIYGAENVIRAAISNNVSKV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEE
IALSTDKAANPINLYGATKLASDKLFVAANNIVGSGKTRFAAVRYGNVVGSRGSVVPFFK
EEEECCCCCCCEEEEECCEECCCEEEEEECCEECCCCCEEEEEEECCEECCCCCCHHHHH
QLIANGADALPITHQDMTRFWISLQDGVDFVLKNFERMQGGEIFVPKIPSVRITDLAAAY
HHHHCCCCCCCCCHHHHHHHHEEHHCCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHH
APDLKKEIVGIRPGEKMHEIMCPGDDCHHTLEFDDHFVIMPSIKFFGRETDFCTNHLGEK
CCCHHHHHCCCCCCHHHHHEECCCCCCCEEEECCCCEEEECCHHHHCCCCHHHHHHCCCC
GHLVPQGFEYNSGTNPKFLTIDEILAMDKLA
CCCCCCCCCCCCCCCCCEEEHHHHHHHHCCC
>Mature Secondary Structure
MFDNKTILITGGTGSFGQKYTKTILAKYKPKRLIILSRDELKQYEMQQIYNAPCMRYFIG
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHC
DVRDGDRLEQAFKDVDFVIHAAALKQVPAAEYNPMECIKTNIYGAENVIRAAISNNVSKV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCEEE
IALSTDKAANPINLYGATKLASDKLFVAANNIVGSGKTRFAAVRYGNVVGSRGSVVPFFK
EEEECCCCCCCEEEEECCEECCCEEEEEECCEECCCCCEEEEEEECCEECCCCCCHHHHH
QLIANGADALPITHQDMTRFWISLQDGVDFVLKNFERMQGGEIFVPKIPSVRITDLAAAY
HHHHCCCCCCCCCHHHHHHHHEEHHCCHHHHHHHHHHHCCCEEEECCCCCEEHHHHHHHH
APDLKKEIVGIRPGEKMHEIMCPGDDCHHTLEFDDHFVIMPSIKFFGRETDFCTNHLGEK
CCCHHHHHCCCCCCHHHHHEECCCCCCCEEEECCCCEEEECCHHHHCCCCHHHHHHCCCC
GHLVPQGFEYNSGTNPKFLTIDEILAMDKLA
CCCCCCCCCCCCCCCCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]