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The map label for this gene is cheD1 [H]

Identifier: 126174335

GI number: 126174335

Start: 2456546

End: 2457166

Strand: Direct

Name: cheD1 [H]

Synonym: Sbal_2116

Alternate gene names: 126174335

Gene position: 2456546-2457166 (Clockwise)

Preceding gene: 126174334

Following gene: 126174336

Centisome position: 47.91

GC content: 45.25

Gene sequence:

>621_bases
GTGCTAAAACCTAATATCGAATATGCCGTAACAGAGCCGAATCGCTACCATGATAGTCATTTTGGTTGCGATGCGGTGAA
GATCTTACCCGGCGAATATTTTGCCACCCGTGAAAATACCATGATAGTGACTGTGCTTGGCTCCTGCGTGTCAGTGTGCT
TGTATGATCCTAAGCTCAAAATCGGCGGGATGAATCACTTTCTATTACCAAGCGATAACAGTAATAGCACTGGGGTGCTC
GCCGACTCTGCCCGCTACGGTGTGTATGCAATGGAACTGTTATTAAATGACTTACTAAAACTCGGTGCACGTCGAAGCGC
AATTGAGGCAAAGGTATTTGGTGGCGGCAACATGTTGCAAGGTTTTACACTGCATAACATTGGTGAGCGTAATGCTGAGT
TTGTAATTGAATATCTTAATACGGAAAATATCCCGATTATTGCCGCCGATTTACTCGATGTGTATCCGCGCAAAGTGTAT
TTTTTCCCCCATACGGGCAAAGTGAAAGTTCGCAAAATTAAAAGTTTGCACAACAGCACGATCCTTGACCGAGAAAGCGA
GTATCGCTTACGGGTTCGTAATCTCCCCACGGGCGGCGACGTTGAACTATTTGGTGATTAA

Upstream 100 bases:

>100_bases
GGACTTTATATTGCGGGACATTCGGAAAATTTTAATATGTTTCCGCAGATTATAACGGCGGTTGGACAGACCACTTATCG
AGCAGCGAAAGGGAGTTCGA

Downstream 100 bases:

>100_bases
GTTATGACGATCAAAGTGCTAGTAGTTGACGATTCCGCGCTGATGCGCAGCTTGCTCGGTAAAATGATTGAGGCTGACCC
TGAACTGTCTCTGGTTGGGC

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLKPNIEYAVTEPNRYHDSHFGCDAVKILPGEYFATRENTMIVTVLGSCVSVCLYDPKLKIGGMNHFLLPSDNSNSTGVL
ADSARYGVYAMELLLNDLLKLGARRSAIEAKVFGGGNMLQGFTLHNIGERNAEFVIEYLNTENIPIIAADLLDVYPRKVY
FFPHTGKVKVRKIKSLHNSTILDRESEYRLRVRNLPTGGDVELFGD

Sequences:

>Translated_206_residues
MLKPNIEYAVTEPNRYHDSHFGCDAVKILPGEYFATRENTMIVTVLGSCVSVCLYDPKLKIGGMNHFLLPSDNSNSTGVL
ADSARYGVYAMELLLNDLLKLGARRSAIEAKVFGGGNMLQGFTLHNIGERNAEFVIEYLNTENIPIIAADLLDVYPRKVY
FFPHTGKVKVRKIKSLHNSTILDRESEYRLRVRNLPTGGDVELFGD
>Mature_206_residues
MLKPNIEYAVTEPNRYHDSHFGCDAVKILPGEYFATRENTMIVTVLGSCVSVCLYDPKLKIGGMNHFLLPSDNSNSTGVL
ADSARYGVYAMELLLNDLLKLGARRSAIEAKVFGGGNMLQGFTLHNIGERNAEFVIEYLNTENIPIIAADLLDVYPRKVY
FFPHTGKVKVRKIKSLHNSTILDRESEYRLRVRNLPTGGDVELFGD

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 23043; Mature: 23043

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKPNIEYAVTEPNRYHDSHFGCDAVKILPGEYFATRENTMIVTVLGSCVSVCLYDPKLK
CCCCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEHHHHHHHHHCCCCEE
IGGMNHFLLPSDNSNSTGVLADSARYGVYAMELLLNDLLKLGARRSAIEAKVFGGGNMLQ
ECCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEC
GFTLHNIGERNAEFVIEYLNTENIPIIAADLLDVYPRKVYFFPHTGKVKVRKIKSLHNST
CEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCE
ILDRESEYRLRVRNLPTGGDVELFGD
ECCCCCCEEEEEEECCCCCCEEEECC
>Mature Secondary Structure
MLKPNIEYAVTEPNRYHDSHFGCDAVKILPGEYFATRENTMIVTVLGSCVSVCLYDPKLK
CCCCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEECCCEEEEEEHHHHHHHHHCCCCEE
IGGMNHFLLPSDNSNSTGVLADSARYGVYAMELLLNDLLKLGARRSAIEAKVFGGGNMLQ
ECCCCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEC
GFTLHNIGERNAEFVIEYLNTENIPIIAADLLDVYPRKVYFFPHTGKVKVRKIKSLHNST
CEEEECCCCCCCEEEEEECCCCCCCEEEHHHHHCCCCEEEEECCCCCEEHHHHHHHHCCE
ILDRESEYRLRVRNLPTGGDVELFGD
ECCCCCCEEEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]